RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W IST3P40565 148 aaPredicted RBP3.77□□□□□ -1.81
VPS38YLR360W SAP185P40856 1058 aa3.77□□□□□ -1.81
VPS38YLR360W FCP1Q03254 732 aa3.77□□□□□ -1.81
VPS38YLR360W SWF1Q04629 336 aa3.77□□□□□ -1.81
VPS38YLR360W YLR455WQ06188 304 aa3.77□□□□□ -1.81
VPS38YLR360W YLR112WQ12130 139 aa3.77□□□□□ -1.81
VPS38YLR360W SSM4P40318 1319 aa3.77□□□□□ -1.81
VPS38YLR360W YPT1P01123 206 aaKnown RBP3.76□□□□□ -1.81
VPS38YLR360W RPL42AP0CX27 106 aaKnown RBP3.76□□□□□ -1.81
VPS38YLR360W RPL42BP0CX28 106 aaKnown RBP3.76□□□□□ -1.81
VPS38YLR360W SRP54P20424 541 aaKnown RBP3.76□□□□□ -1.81
VPS38YLR360W XRS2P33301 854 aa3.76□□□□□ -1.81
VPS38YLR360W TFC3P34111 1160 aa3.76□□□□□ -1.81
VPS38YLR360W TEF4P36008 412 aaKnown RBP3.76□□□□□ -1.81
VPS38YLR360W VRG4P40107 337 aa3.76□□□□□ -1.81
VPS38YLR360W PFK26P40433 827 aaKnown RBP3.76□□□□□ -1.81
VPS38YLR360W SCS3P53012 380 aa3.76□□□□□ -1.81
VPS38YLR360W ATG16Q03818 150 aa3.76□□□□□ -1.81
VPS38YLR360W POS5Q06892 414 aa3.76□□□□□ -1.81
VPS38YLR360W DSE3Q08729 430 aa3.76□□□□□ -1.81
VPS38YLR360W PET111P08468 800 aa3.75□□□□□ -1.81
VPS38YLR360W NTR2P36118 322 aaPredicted RBP3.75□□□□□ -1.81
VPS38YLR360W LSC1P53598 329 aaKnown RBP3.75□□□□□ -1.81
VPS38YLR360W EAF7P53911 425 aaKnown RBP3.75□□□□□ -1.81
VPS38YLR360W REG1Q00816 1014 aa3.75□□□□□ -1.81
VPS38YLR360W IZH1Q03419 316 aa3.75□□□□□ -1.81
VPS38YLR360W VMS1Q04311 632 aaKnown RBP3.75□□□□□ -1.81
VPS38YLR360W YMR034CQ05131 434 aaPredicted RBP3.75□□□□□ -1.81
VPS38YLR360W CHO1P08456 276 aa3.74□□□□□ -1.81
VPS38YLR360W TKL1P23254 680 aaKnown RBP3.74□□□□□ -1.81
VPS38YLR360W SRB5P32585 307 aa3.74□□□□□ -1.81
VPS38YLR360W CNS1P33313 385 aa3.74□□□□□ -1.81
VPS38YLR360W AAP1P37898 856 aaKnown RBP3.74□□□□□ -1.81
VPS38YLR360W PSY4P38193 441 aa3.74□□□□□ -1.81
VPS38YLR360W SWP82P43554 623 aa3.74□□□□□ -1.81
VPS38YLR360W CTF18P49956 741 aa3.74□□□□□ -1.81
VPS38YLR360W PSP1P50896 841 aaKnown RBP3.74□□□□□ -1.81
VPS38YLR360W RRT6P53117 311 aaPredicted RBP3.74□□□□□ -1.81
VPS38YLR360W RTS3P53289 263 aa3.74□□□□□ -1.81
VPS38YLR360W RSM28Q03430 361 aa3.74□□□□□ -1.81
VPS38YLR360W SRL1Q08673 210 aa3.74□□□□□ -1.81
VPS38YLR360W BUD7Q08754 746 aa3.74□□□□□ -1.81
VPS38YLR360W TRM8Q12009 286 aa3.74□□□□□ -1.81
VPS38YLR360W YLR302CO13544 120 aa3.73□□□□□ -1.81
VPS38YLR360W ERG8P24521 451 aa3.73□□□□□ -1.81
VPS38YLR360W SEC31P38968 1273 aaKnown RBP3.73□□□□□ -1.81
VPS38YLR360W CTK2P46962 323 aa3.73□□□□□ -1.81
VPS38YLR360W GTR1Q00582 310 aa3.73□□□□□ -1.81
VPS38YLR360W NUP53Q03790 475 aa3.73□□□□□ -1.81
VPS38YLR360W TDA9Q04545 1251 aa3.73□□□□□ -1.81
VPS38YLR360W PSR2Q07949 397 aa3.73□□□□□ -1.81
VPS38YLR360W MLH2Q07980 695 aa3.73□□□□□ -1.81
VPS38YLR360W SNF1P06782 633 aaKnown RBP3.72□□□□□ -1.81
VPS38YLR360W CBP1P07252 654 aa3.72□□□□□ -1.81
VPS38YLR360W RAP1P11938 827 aa3.72□□□□□ -1.81
VPS38YLR360W CDC15P27636 974 aa3.72□□□□□ -1.81
VPS38YLR360W ECM10P39987 644 aa3.72□□□□□ -1.81
VPS38YLR360W IES5P40060 125 aa3.72□□□□□ -1.81
VPS38YLR360W RIC1P40395 1056 aa3.72□□□□□ -1.81
VPS38YLR360W YIL152WP40455 235 aa3.72□□□□□ -1.81
VPS38YLR360W YNL234WP53857 426 aa3.72□□□□□ -1.81
VPS38YLR360W CAC2Q04199 468 aa3.72□□□□□ -1.81
VPS38YLR360W TFC6Q06339 672 aa3.72□□□□□ -1.81
VPS38YLR360W YOR019WQ99248 730 aa3.72□□□□□ -1.81
VPS38YLR360W YCR043CP25361 127 aa3.71□□□□□ -1.81
VPS38YLR360W SLC1P33333 303 aa3.71□□□□□ -1.81
VPS38YLR360W ARC40P38328 384 aaKnown RBP3.71□□□□□ -1.81
VPS38YLR360W PSD1P39006 500 aa3.71□□□□□ -1.81
VPS38YLR360W MET30P39014 640 aa3.71□□□□□ -1.81
VPS38YLR360W YFR020WP43600 232 aa3.71□□□□□ -1.81
VPS38YLR360W IML2P47031 731 aa3.71□□□□□ -1.81
VPS38YLR360W BNA1P47096 177 aa3.71□□□□□ -1.81
VPS38YLR360W YGR021WP53212 290 aa3.71□□□□□ -1.81
VPS38YLR360W ASI1P54074 624 aa3.71□□□□□ -1.81
VPS38YLR360W DIG1Q03063 452 aaKnown RBP3.71□□□□□ -1.81
VPS38YLR360W ECI1Q05871 280 aa3.71□□□□□ -1.81
VPS38YLR360W VID22Q05934 901 aa3.71□□□□□ -1.81
VPS38YLR360W NUS1Q12063 375 aa3.71□□□□□ -1.81
VPS38YLR360W VCX1Q99385 411 aa3.71□□□□□ -1.81
VPS38YLR360W STE50P25344 346 aa3.7□□□□□ -1.82
VPS38YLR360W PWP2P25635 923 aaKnown RBP3.7□□□□□ -1.82
VPS38YLR360W SAC1P32368 623 aaKnown RBP3.7□□□□□ -1.82
VPS38YLR360W VPS24P36095 224 aaKnown RBP3.7□□□□□ -1.82
VPS38YLR360W ESL2P36168 1195 aa3.7□□□□□ -1.82
VPS38YLR360W MNN2P38069 597 aa3.7□□□□□ -1.82
VPS38YLR360W YIL169CP40442 995 aa3.7□□□□□ -1.82
VPS38YLR360W TES1P41903 349 aaKnown RBP3.7□□□□□ -1.82
VPS38YLR360W MEP2P41948 499 aa3.7□□□□□ -1.82
VPS38YLR360W SGF73P53165 657 aa3.7□□□□□ -1.82
VPS38YLR360W NNF2P53253 936 aa3.7□□□□□ -1.82
VPS38YLR360W UTP21Q06078 939 aaPredicted RBP3.7□□□□□ -1.82
VPS38YLR360W MCP2Q06567 569 aa3.7□□□□□ -1.82
VPS38YLR360W STV1P37296 890 aa3.7□□□□□ -1.82
VPS38YLR360W YTP1P53584 459 aa3.7□□□□□ -1.82
VPS38YLR360W PSK2Q08217 1101 aa3.7□□□□□ -1.82
VPS38YLR360W HXK2P04807 486 aaKnown RBP3.69□□□□□ -1.82
VPS38YLR360W YFL068WP0CX99 160 aa3.69□□□□□ -1.82
VPS38YLR360W YLL066W-AP0CY00 160 aa3.69□□□□□ -1.82
VPS38YLR360W YLL067W-AP0CY01 160 aa3.69□□□□□ -1.82
VPS38YLR360W GUK1P15454 187 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms