RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C ZAP1P47043 880 aa2.49□□□□□ -2.01
SHE2YKL130C UPF3P48412 387 aaKnown RBP2.49□□□□□ -2.01
SHE2YKL130C RRT6P53117 311 aaPredicted RBP2.49□□□□□ -2.01
SHE2YKL130C COG2P53271 262 aa2.49□□□□□ -2.01
SHE2YKL130C RBG2P53295 368 aaKnown RBP2.49□□□□□ -2.01
SHE2YKL130C BSC5P53755 489 aa2.49□□□□□ -2.01
SHE2YKL130C YNL092WP53934 400 aa2.49□□□□□ -2.01
SHE2YKL130C ICL2Q12031 575 aa2.49□□□□□ -2.01
SHE2YKL130C SUL2Q12325 893 aa2.49□□□□□ -2.01
SHE2YKL130C GAL4P04386 881 aa2.48□□□□□ -2.01
SHE2YKL130C SPO16P17122 198 aa2.48□□□□□ -2.01
SHE2YKL130C PRE8P23639 250 aa2.48□□□□□ -2.01
SHE2YKL130C PRE2P30656 287 aaKnown RBP2.48□□□□□ -2.01
SHE2YKL130C ARB1P40024 610 aaKnown RBP2.48□□□□□ -2.01
SHE2YKL130C TES1P41903 349 aaKnown RBP2.48□□□□□ -2.01
SHE2YKL130C ARC1P46672 376 aaKnown RBP2.48□□□□□ -2.01
SHE2YKL130C SGM1P47166 707 aa2.48□□□□□ -2.01
SHE2YKL130C ASE1P50275 885 aa2.48□□□□□ -2.01
SHE2YKL130C COG1P53079 417 aa2.48□□□□□ -2.01
SHE2YKL130C CSL4P53859 292 aaPredicted RBP2.48□□□□□ -2.01
SHE2YKL130C FCP1Q03254 732 aa2.48□□□□□ -2.01
SHE2YKL130C RCO1Q04779 684 aa2.48□□□□□ -2.01
SHE2YKL130C YMR034CQ05131 434 aaPredicted RBP2.48□□□□□ -2.01
SHE2YKL130C VAM6Q07468 1049 aa2.48□□□□□ -2.01
SHE2YKL130C PFA4Q12006 378 aa2.48□□□□□ -2.01
SHE2YKL130C NUS1Q12063 375 aa2.48□□□□□ -2.01
SHE2YKL130C TAH18Q12181 623 aa2.48□□□□□ -2.01
SHE2YKL130C ERG27Q12452 347 aaKnown RBP2.48□□□□□ -2.01
SHE2YKL130C RTC1Q08281 1341 aa2.47□□□□□ -2.01
SHE2YKL130C ATP2P00830 511 aaKnown RBP2.47□□□□□ -2.01
SHE2YKL130C TY2A-LR1P0C2J4 438 aa2.47□□□□□ -2.01
SHE2YKL130C TY2A-FP0CX61 438 aa2.47□□□□□ -2.01
SHE2YKL130C TY2A-GR2P0CX62 438 aa2.47□□□□□ -2.01
SHE2YKL130C CDC24P11433 854 aaPredicted RBP2.47□□□□□ -2.01
SHE2YKL130C TY2A-CP25383 438 aa2.47□□□□□ -2.01
SHE2YKL130C YCR061WP25639 631 aa2.47□□□□□ -2.01
SHE2YKL130C SAC6P32599 642 aaKnown RBP2.47□□□□□ -2.01
SHE2YKL130C NFU1P32860 256 aa2.47□□□□□ -2.01
SHE2YKL130C SDH8P38345 138 aa2.47□□□□□ -2.01
SHE2YKL130C TOM71P38825 639 aaKnown RBP2.47□□□□□ -2.01
SHE2YKL130C RTT107P38850 1070 aa2.47□□□□□ -2.01
SHE2YKL130C LNP1P38878 278 aa2.47□□□□□ -2.01
SHE2YKL130C MET30P39014 640 aa2.47□□□□□ -2.01
SHE2YKL130C LAS21P40367 830 aa2.47□□□□□ -2.01
SHE2YKL130C YIL161WP40449 235 aaKnown RBP2.47□□□□□ -2.01
SHE2YKL130C LYS14P40971 790 aa2.47□□□□□ -2.01
SHE2YKL130C VTC2P43585 828 aa2.47□□□□□ -2.01
SHE2YKL130C IRC6P43615 237 aa2.47□□□□□ -2.01
SHE2YKL130C SIP4P46954 829 aa2.47□□□□□ -2.01
SHE2YKL130C VPS4P52917 437 aa2.47□□□□□ -2.01
SHE2YKL130C MTG1Q03151 367 aaPredicted RBP2.47□□□□□ -2.01
SHE2YKL130C TY2A-DR2Q03483 438 aa2.47□□□□□ -2.01
SHE2YKL130C ATG23Q06671 453 aa2.47□□□□□ -2.01
SHE2YKL130C HUA2Q12134 243 aa2.47□□□□□ -2.01
SHE2YKL130C GET3Q12154 354 aaKnown RBP2.47□□□□□ -2.01
SHE2YKL130C TY2A-BQ12260 438 aa2.47□□□□□ -2.01
SHE2YKL130C TY2A-OR2Q12293 438 aa2.47□□□□□ -2.01
SHE2YKL130C TY2A-DR1Q12392 438 aa2.47□□□□□ -2.01
SHE2YKL130C TY2A-OR1Q12439 438 aa2.47□□□□□ -2.01
SHE2YKL130C PCD1Q12524 340 aa2.47□□□□□ -2.01
SHE2YKL130C TY2A-DR3Q99303 438 aa2.47□□□□□ -2.01
SHE2YKL130C SEC53P07283 254 aaKnown RBP2.46□□□□□ -2.02
SHE2YKL130C RPB2P08518 1224 aaKnown RBP2.46□□□□□ -2.02
SHE2YKL130C RPL19AP0CX82 189 aaKnown RBP2.46□□□□□ -2.02
SHE2YKL130C RPL19BP0CX83 189 aaPredicted RBP2.46□□□□□ -2.02
SHE2YKL130C MET8P15807 274 aa2.46□□□□□ -2.02
SHE2YKL130C PDE1P22434 369 aa2.46□□□□□ -2.02
SHE2YKL130C RRP43P25359 394 aaPredicted RBP2.46□□□□□ -2.02
SHE2YKL130C PGS1P25578 521 aa2.46□□□□□ -2.02
SHE2YKL130C ESL2P36168 1195 aa2.46□□□□□ -2.02
SHE2YKL130C YIL169CP40442 995 aa2.46□□□□□ -2.02
SHE2YKL130C UBP7P40453 1071 aa2.46□□□□□ -2.02
SHE2YKL130C ARF3P40994 183 aaRIP-Chip data2.46□□□□□ -2.02not detected
SHE2YKL130C SAD1P43589 448 aa2.46□□□□□ -2.02
SHE2YKL130C MRPL19P53875 158 aa2.46□□□□□ -2.02
SHE2YKL130C VTC3Q02725 835 aa2.46□□□□□ -2.02
SHE2YKL130C UBP16Q02863 499 aa2.46□□□□□ -2.02
SHE2YKL130C YML119WQ03208 357 aa2.46□□□□□ -2.02
SHE2YKL130C YKU80Q04437 629 aa2.46□□□□□ -2.02
SHE2YKL130C CRF1Q04930 467 aa2.46□□□□□ -2.02
SHE2YKL130C YLR287CQ05881 355 aa2.46□□□□□ -2.02
SHE2YKL130C ECM22Q05958 814 aaPredicted RBP2.46□□□□□ -2.02
SHE2YKL130C MLH2Q07980 695 aa2.46□□□□□ -2.02
SHE2YKL130C TMA16Q08687 178 aa2.46□□□□□ -2.02
SHE2YKL130C SCM3Q12334 223 aa2.46□□□□□ -2.02
SHE2YKL130C RVB2Q12464 471 aaKnown RBP2.46□□□□□ -2.02
SHE2YKL130C YBR255C-AQ3E776 120 aa2.46□□□□□ -2.02
SHE2YKL130C YBR126W-AQ8TGU7 68 aa2.46□□□□□ -2.02
SHE2YKL130C GCN4P03069 281 aa2.45□□□□□ -2.02
SHE2YKL130C FUR1P18562 216 aaKnown RBP2.45□□□□□ -2.02
SHE2YKL130C OLE1P21147 510 aaKnown RBP2.45□□□□□ -2.02
SHE2YKL130C ERG8P24521 451 aa2.45□□□□□ -2.02
SHE2YKL130C SGF29P25554 259 aa2.45□□□□□ -2.02
SHE2YKL130C URK1P27515 501 aa2.45□□□□□ -2.02
SHE2YKL130C MRP20P32387 263 aa2.45□□□□□ -2.02
SHE2YKL130C TFC3P34111 1160 aa2.45□□□□□ -2.02
SHE2YKL130C YBL029WP38201 376 aa2.45□□□□□ -2.02
SHE2YKL130C YBR225WP38321 900 aa2.45□□□□□ -2.02
SHE2YKL130C SAP1P39955 897 aaKnown RBP2.45□□□□□ -2.02
SHE2YKL130C MAM1P40065 302 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms