RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W BET4Q00618 327 aa2.46□□□□□ -2.02
MSL1YIR009W GIR2Q03768 265 aaPredicted RBP2.46□□□□□ -2.02
MSL1YIR009W SCW10Q04951 389 aa2.46□□□□□ -2.02
MSL1YIR009W EIS1Q05050 843 aaKnown RBP2.46□□□□□ -2.02
MSL1YIR009W TSR2Q06672 205 aaKnown RBP2.46□□□□□ -2.02
MSL1YIR009W OPY2Q06810 360 aa2.46□□□□□ -2.02
MSL1YIR009W YBR255C-AQ3E776 120 aa2.46□□□□□ -2.02
MSL1YIR009W AAC3P18238 307 aa2.45□□□□□ -2.02
MSL1YIR009W PDE1P22434 369 aa2.45□□□□□ -2.02
MSL1YIR009W YCL049CP25577 312 aa2.45□□□□□ -2.02
MSL1YIR009W XRS2P33301 854 aa2.45□□□□□ -2.02
MSL1YIR009W MFT1P33441 392 aaKnown RBP2.45□□□□□ -2.02
MSL1YIR009W OCT1P35999 772 aa2.45□□□□□ -2.02
MSL1YIR009W YBR138CP38277 524 aa2.45□□□□□ -2.02
MSL1YIR009W YLF2P38746 405 aa2.45□□□□□ -2.02
MSL1YIR009W AXL2P38928 823 aa2.45□□□□□ -2.02
MSL1YIR009W YND1P40009 630 aa2.45□□□□□ -2.02
MSL1YIR009W PCL6P40038 420 aa2.45□□□□□ -2.02
MSL1YIR009W LYS14P40971 790 aa2.45□□□□□ -2.02
MSL1YIR009W BNA1P47096 177 aa2.45□□□□□ -2.02
MSL1YIR009W HOS2P53096 452 aaPredicted RBP2.45□□□□□ -2.02
MSL1YIR009W RRT6P53117 311 aaPredicted RBP2.45□□□□□ -2.02
MSL1YIR009W DIG1Q03063 452 aaKnown RBP2.45□□□□□ -2.02
MSL1YIR009W YMR317WQ04893 1140 aa2.45□□□□□ -2.02
MSL1YIR009W VID22Q05934 901 aa2.45□□□□□ -2.02
MSL1YIR009W PDR8Q06149 701 aa2.45□□□□□ -2.02
MSL1YIR009W PIG1Q06216 648 aa2.45□□□□□ -2.02
MSL1YIR009W IWR1Q07532 353 aaPredicted RBP2.45□□□□□ -2.02
MSL1YIR009W CRD1Q07560 283 aa2.45□□□□□ -2.02
MSL1YIR009W TRM8Q12009 286 aa2.45□□□□□ -2.02
MSL1YIR009W YMR230W-AQ3E7B5 62 aa2.45□□□□□ -2.02
MSL1YIR009W FOB1O13329 566 aa2.44□□□□□ -2.02
MSL1YIR009W SIR1P21691 654 aa2.44□□□□□ -2.02
MSL1YIR009W UBC1P21734 215 aaKnown RBP2.44□□□□□ -2.02
MSL1YIR009W CNS1P33313 385 aa2.44□□□□□ -2.02
MSL1YIR009W FMP46P36141 133 aaKnown RBP2.44□□□□□ -2.02
MSL1YIR009W MRPL36P36531 177 aa2.44□□□□□ -2.02
MSL1YIR009W DPH1P40487 425 aaKnown RBP2.44□□□□□ -2.02
MSL1YIR009W CAB2P40506 365 aa2.44□□□□□ -2.02
MSL1YIR009W ESF2P53743 316 aaKnown RBP2.44□□□□□ -2.02
MSL1YIR009W VPS64Q03944 604 aa2.44□□□□□ -2.02
MSL1YIR009W RTT103Q05543 409 aa2.44□□□□□ -2.02
MSL1YIR009W YLR281CQ05863 155 aa2.44□□□□□ -2.02
MSL1YIR009W CSR1Q06705 408 aaKnown RBP2.44□□□□□ -2.02
MSL1YIR009W AIM6Q07716 390 aa2.44□□□□□ -2.02
MSL1YIR009W ICL2Q12031 575 aa2.44□□□□□ -2.02
MSL1YIR009W COX17Q12287 69 aa2.44□□□□□ -2.02
MSL1YIR009W MED1Q12321 566 aa2.44□□□□□ -2.02
MSL1YIR009W ERP4Q12450 207 aa2.44□□□□□ -2.02
MSL1YIR009W PCD1Q12524 340 aa2.44□□□□□ -2.02
MSL1YIR009W TPK1P06244 397 aa2.43□□□□□ -2.02
MSL1YIR009W MTF2P10849 440 aa2.43□□□□□ -2.02
MSL1YIR009W PPZ1P26570 692 aa2.43□□□□□ -2.02
MSL1YIR009W LAC1P28496 418 aa2.43□□□□□ -2.02
MSL1YIR009W SWC3P31376 625 aa2.43□□□□□ -2.02
MSL1YIR009W TEF4P36008 412 aaKnown RBP2.43□□□□□ -2.02
MSL1YIR009W MNN2P38069 597 aa2.43□□□□□ -2.02
MSL1YIR009W RKM3P38222 552 aa2.43□□□□□ -2.02
MSL1YIR009W YER010CP40011 234 aa2.43□□□□□ -2.02
MSL1YIR009W VRG4P40107 337 aa2.43□□□□□ -2.02
MSL1YIR009W SAD1P43589 448 aa2.43□□□□□ -2.02
MSL1YIR009W VPS25P47142 202 aa2.43□□□□□ -2.02
MSL1YIR009W YGL036WP53185 909 aaPredicted RBP2.43□□□□□ -2.02
MSL1YIR009W CAC2Q04199 468 aa2.43□□□□□ -2.02
MSL1YIR009W SNO4Q04902 237 aa2.43□□□□□ -2.02
MSL1YIR009W AAD4Q07747 329 aa2.43□□□□□ -2.02
MSL1YIR009W MCH4Q08268 501 aa2.43□□□□□ -2.02
MSL1YIR009W HSP33Q08914 237 aaKnown RBP2.43□□□□□ -2.02
MSL1YIR009W HSP32Q08992 237 aa2.43□□□□□ -2.02
MSL1YIR009W YLR112WQ12130 139 aa2.43□□□□□ -2.02
MSL1YIR009W YLR302CO13544 120 aa2.42□□□□□ -2.02
MSL1YIR009W COX1P00401 534 aa2.42□□□□□ -2.02
MSL1YIR009W CDC31P06704 161 aaKnown RBP2.42□□□□□ -2.02
MSL1YIR009W HSC82P15108 705 aaKnown RBP2.42□□□□□ -2.02
MSL1YIR009W ARP2P32381 391 aaKnown RBP2.42□□□□□ -2.02
MSL1YIR009W PAH1P32567 862 aa2.42□□□□□ -2.02
MSL1YIR009W HES1P35843 434 aa2.42□□□□□ -2.02
MSL1YIR009W ESL1P40456 1118 aa2.42□□□□□ -2.02
MSL1YIR009W ZAP1P47043 880 aa2.42□□□□□ -2.02
MSL1YIR009W RBG2P53295 368 aaKnown RBP2.42□□□□□ -2.02
MSL1YIR009W ATG21Q02887 496 aa2.42□□□□□ -2.02
MSL1YIR009W IZH1Q03419 316 aa2.42□□□□□ -2.02
MSL1YIR009W FMP42Q04991 504 aa2.42□□□□□ -2.02
MSL1YIR009W ARP9Q05123 467 aa2.42□□□□□ -2.02
MSL1YIR009W GPN2Q08726 347 aaPredicted RBP2.42□□□□□ -2.02
MSL1YIR009W RTP1Q12751 981 aa2.42□□□□□ -2.02
MSL1YIR009W CDC23P16522 626 aa2.41□□□□□ -2.02
MSL1YIR009W ASG1P40467 964 aa2.41□□□□□ -2.02
MSL1YIR009W SKP2P42843 763 aa2.41□□□□□ -2.02
MSL1YIR009W VTC2P43585 828 aa2.41□□□□□ -2.02
MSL1YIR009W UPF3P48412 387 aaKnown RBP2.41□□□□□ -2.02
MSL1YIR009W CTF18P49956 741 aa2.41□□□□□ -2.02
MSL1YIR009W UBP8P50102 471 aa2.41□□□□□ -2.02
MSL1YIR009W COG1P53079 417 aa2.41□□□□□ -2.02
MSL1YIR009W YGR079WP53249 370 aa2.41□□□□□ -2.02
MSL1YIR009W TIM10P87108 93 aa2.41□□□□□ -2.02
MSL1YIR009W STP3Q05937 343 aa2.41□□□□□ -2.02
MSL1YIR009W POS5Q06892 414 aa2.41□□□□□ -2.02
MSL1YIR009W FRE3Q08905 711 aa2.41□□□□□ -2.02
MSL1YIR009W APL5Q08951 932 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 135.2 ms