RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W ESA1Q08649 445 aa7.54□□□□□ -1.2
PEX28YHR150W NTO1Q12311 748 aa7.54□□□□□ -1.2
PEX28YHR150W CCP1P00431 361 aa7.53□□□□□ -1.2
PEX28YHR150W HSF1P10961 833 aa7.53□□□□□ -1.2
PEX28YHR150W URE2P23202 354 aaKnown RBP7.53□□□□□ -1.2
PEX28YHR150W CNA1P23287 553 aa7.53□□□□□ -1.2
PEX28YHR150W BIO2P32451 375 aa7.53□□□□□ -1.2
PEX28YHR150W NGG1P32494 702 aa7.53□□□□□ -1.2
PEX28YHR150W NPL6P32832 435 aa7.53□□□□□ -1.2
PEX28YHR150W TIF3P34167 436 aaKnown RBP7.53□□□□□ -1.2
PEX28YHR150W PTH2P34222 208 aa7.53□□□□□ -1.2
PEX28YHR150W TDP1P38319 544 aa7.53□□□□□ -1.2
PEX28YHR150W SLX1P38324 304 aa7.53□□□□□ -1.2
PEX28YHR150W YBR259WP38338 688 aa7.53□□□□□ -1.2
PEX28YHR150W URA8P38627 578 aaPredicted RBP7.53□□□□□ -1.2
PEX28YHR150W ARN1P38731 627 aa7.53□□□□□ -1.2
PEX28YHR150W BRL1P38770 471 aa7.53□□□□□ -1.2
PEX28YHR150W UBP7P40453 1071 aa7.53□□□□□ -1.2
PEX28YHR150W ROK1P45818 564 aaPredicted RBP7.53□□□□□ -1.2
PEX28YHR150W MRK1P50873 501 aa7.53□□□□□ -1.2
PEX28YHR150W GET1P53192 235 aa7.53□□□□□ -1.2
PEX28YHR150W ARC35P53731 342 aaKnown RBP7.53□□□□□ -1.2
PEX28YHR150W SFB2P53953 876 aa7.53□□□□□ -1.2
PEX28YHR150W YML083CQ04526 418 aa7.53□□□□□ -1.2
PEX28YHR150W HDA3Q06623 655 aa7.53□□□□□ -1.2
PEX28YHR150W LEA1Q08963 238 aaPredicted RBP7.53□□□□□ -1.2
PEX28YHR150W YOR342CQ12182 319 aa7.53□□□□□ -1.2
PEX28YHR150W SNF4P12904 322 aa7.52□□□□□ -1.2
PEX28YHR150W DPB2P24482 689 aaPredicted RBP7.52□□□□□ -1.2
PEX28YHR150W CAD1P24813 409 aaKnown RBP7.52□□□□□ -1.2
PEX28YHR150W CDC3P32457 520 aaKnown RBP7.52□□□□□ -1.2
PEX28YHR150W UGP1P32861 499 aaKnown RBP7.52□□□□□ -1.2
PEX28YHR150W BCK2P33306 851 aa7.52□□□□□ -1.2
PEX28YHR150W YKR015CP36111 568 aa7.52□□□□□ -1.2
PEX28YHR150W RIM11P38615 370 aa7.52□□□□□ -1.2
PEX28YHR150W YEL023CP39992 682 aa7.52□□□□□ -1.2
PEX28YHR150W AIM20P40451 204 aa7.52□□□□□ -1.2
PEX28YHR150W IAH1P41734 238 aa7.52□□□□□ -1.2
PEX28YHR150W YGR035CP53222 116 aa7.52□□□□□ -1.2
PEX28YHR150W LSM3P57743 89 aaKnown RBP7.52□□□□□ -1.2
PEX28YHR150W ADE12P80210 433 aaKnown RBP7.52□□□□□ -1.2
PEX28YHR150W RLI1Q03195 608 aaKnown RBP7.52□□□□□ -1.2
PEX28YHR150W INP2Q03824 705 aa7.52□□□□□ -1.2
PEX28YHR150W CRN1Q06440 651 aa7.52□□□□□ -1.2
PEX28YHR150W SYT1Q06836 1226 aa7.52□□□□□ -1.2
PEX28YHR150W NHA1Q99271 985 aa7.52□□□□□ -1.2
PEX28YHR150W MAS1P10507 462 aa7.52□□□□□ -1.21
PEX28YHR150W GLN4P13188 809 aaKnown RBP7.52□□□□□ -1.21
PEX28YHR150W MET4P32389 672 aa7.52□□□□□ -1.21
PEX28YHR150W PEX6P33760 1030 aa7.52□□□□□ -1.21
PEX28YHR150W NUP60P39705 539 aa7.52□□□□□ -1.21
PEX28YHR150W ECM10P39987 644 aa7.52□□□□□ -1.21
PEX28YHR150W SEC28P40509 296 aaKnown RBP7.52□□□□□ -1.21
PEX28YHR150W GPI1P53306 609 aa7.52□□□□□ -1.21
PEX28YHR150W GCN5Q03330 439 aa7.52□□□□□ -1.21
PEX28YHR150W CDA1Q06702 301 aa7.52□□□□□ -1.21
PEX28YHR150W PSY3Q12318 242 aa7.52□□□□□ -1.21
PEX28YHR150W CMR1Q12510 522 aaKnown RBP7.52□□□□□ -1.21
PEX28YHR150W YPL247CQ12523 523 aa7.52□□□□□ -1.21
PEX28YHR150W COR1P07256 457 aa7.51□□□□□ -1.21
PEX28YHR150W NMT1P14743 455 aa7.51□□□□□ -1.21
PEX28YHR150W BEM1P29366 551 aa7.51□□□□□ -1.21
PEX28YHR150W VPH1P32563 840 aaKnown RBP7.51□□□□□ -1.21
PEX28YHR150W GCS1P35197 352 aa7.51□□□□□ -1.21
PEX28YHR150W HMT1P38074 348 aa7.51□□□□□ -1.21
PEX28YHR150W YBL029WP38201 376 aa7.51□□□□□ -1.21
PEX28YHR150W KAP104P38217 918 aaKnown RBP7.51□□□□□ -1.21
PEX28YHR150W SIF2P38262 535 aa7.51□□□□□ -1.21
PEX28YHR150W AMN1P38285 549 aaPredicted RBP7.51□□□□□ -1.21
PEX28YHR150W APE4P38821 490 aa7.51□□□□□ -1.21
PEX28YHR150W YHR131CP38835 850 aa7.51□□□□□ -1.21
PEX28YHR150W UTP9P38882 575 aaKnown RBP7.51□□□□□ -1.21
PEX28YHR150W EDC3P39998 551 aaKnown RBP7.51□□□□□ -1.21
PEX28YHR150W VPS25P47142 202 aa7.51□□□□□ -1.21
PEX28YHR150W TIM13P53299 105 aa7.51□□□□□ -1.21
PEX28YHR150W SPP1Q03012 353 aa7.51□□□□□ -1.21
PEX28YHR150W YPL034WQ03083 165 aa7.51□□□□□ -1.21
PEX28YHR150W TRS31Q03337 283 aa7.51□□□□□ -1.21
PEX28YHR150W ENT5Q03769 411 aaKnown RBP7.51□□□□□ -1.21
PEX28YHR150W AIM32Q04689 311 aa7.51□□□□□ -1.21
PEX28YHR150W YMR226CQ05016 267 aaKnown RBP7.51□□□□□ -1.21
PEX28YHR150W ECM38Q05902 660 aaPredicted RBP7.51□□□□□ -1.21
PEX28YHR150W SWC7Q06707 132 aa7.51□□□□□ -1.21
PEX28YHR150W MUM3Q08750 479 aa7.51□□□□□ -1.21
PEX28YHR150W VIK1Q12045 647 aa7.51□□□□□ -1.21
PEX28YHR150W PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
PEX28YHR150W UBX3Q12229 455 aa7.51□□□□□ -1.21
PEX28YHR150W SVS1Q12254 260 aa7.51□□□□□ -1.21
PEX28YHR150W MDY2Q12285 212 aa7.51□□□□□ -1.21
PEX28YHR150W YVC1Q12324 675 aa7.51□□□□□ -1.21
PEX28YHR150W APM4Q99186 491 aa7.51□□□□□ -1.21
PEX28YHR150W COX5AP00424 153 aa7.5□□□□□ -1.21
PEX28YHR150W ATP6P00854 259 aa7.5□□□□□ -1.21
PEX28YHR150W TRP3P00937 484 aa7.5□□□□□ -1.21
PEX28YHR150W PAT1P25644 796 aaKnown RBP7.5□□□□□ -1.21
PEX28YHR150W YBR284WP38150 797 aa7.5□□□□□ -1.21
PEX28YHR150W FHL1P39521 936 aa7.5□□□□□ -1.21
PEX28YHR150W NOP19P53317 196 aaPredicted RBP7.5□□□□□ -1.21
PEX28YHR150W GND2P53319 492 aa7.5□□□□□ -1.21
PEX28YHR150W SLM2P53955 656 aa7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms