RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W FOX2Q02207 900 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W ADD37Q03233 198 aa2.44□□□□□ -2.02
TRA1YHR099W COQ9Q05779 260 aa2.44□□□□□ -2.02
TRA1YHR099W YLR173WQ06247 608 aa2.44□□□□□ -2.02
TRA1YHR099W JLP1Q12358 412 aa2.44□□□□□ -2.02
TRA1YHR099W PGK1P00560 416 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W MRPL32P25348 183 aa2.44□□□□□ -2.02
TRA1YHR099W YDJ1P25491 409 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W DCC1P25559 380 aa2.44□□□□□ -2.02
TRA1YHR099W MAC1P35192 417 aa2.44□□□□□ -2.02
TRA1YHR099W RER2P35196 286 aa2.44□□□□□ -2.02
TRA1YHR099W CCT6P39079 546 aa2.44□□□□□ -2.02
TRA1YHR099W LSM5P40089 93 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W DPH1P40487 425 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W MPS3P47069 682 aa2.44□□□□□ -2.02
TRA1YHR099W RTA1P53047 317 aa2.44□□□□□ -2.02
TRA1YHR099W IPI3P53877 555 aa2.44□□□□□ -2.02
TRA1YHR099W RCM1P53972 490 aa2.44□□□□□ -2.02
TRA1YHR099W REG1Q00816 1014 aa2.44□□□□□ -2.02
TRA1YHR099W PKR1Q03880 122 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W KAP95Q06142 861 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W SPO75Q07798 868 aa2.44□□□□□ -2.02
TRA1YHR099W NBA1Q08229 501 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W TMA16Q08687 178 aa2.44□□□□□ -2.02
TRA1YHR099W REP1P03871 373 aa2.44□□□□□ -2.02
TRA1YHR099W CBP6P07253 162 aaPredicted RBP2.44□□□□□ -2.02
TRA1YHR099W AHC2P25649 128 aa2.44□□□□□ -2.02
TRA1YHR099W TIP20P33891 701 aa2.44□□□□□ -2.02
TRA1YHR099W YHL044WP38727 235 aa2.44□□□□□ -2.02
TRA1YHR099W LSM12P38828 187 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W STB1P42845 420 aa2.44□□□□□ -2.02
TRA1YHR099W SKI6P46948 246 aaPredicted RBP2.44□□□□□ -2.02
TRA1YHR099W YJR030CP47101 745 aa2.44□□□□□ -2.02
TRA1YHR099W YNR071CP53757 342 aa2.44□□□□□ -2.02
TRA1YHR099W DIS3Q08162 1001 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W ADE6P38972 1358 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W INH1P01097 85 aa2.44□□□□□ -2.02
TRA1YHR099W ARG81P05085 880 aa2.44□□□□□ -2.02
TRA1YHR099W YAR066WP0CX18 203 aa2.44□□□□□ -2.02
TRA1YHR099W YHR214WP0CX19 203 aa2.44□□□□□ -2.02
TRA1YHR099W RPL35AP0CX84 120 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W RPL35BP0CX85 120 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W MCM1P11746 286 aa2.44□□□□□ -2.02
TRA1YHR099W HOM2P13663 365 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W MCM4P30665 933 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W TPS3P38426 1054 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W SRP72P38688 640 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W PIK1P39104 1066 aa2.44□□□□□ -2.02
TRA1YHR099W PAC1P39946 494 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W YIR042CP40586 236 aa2.44□□□□□ -2.02
TRA1YHR099W LEM3P42838 414 aa2.44□□□□□ -2.02
TRA1YHR099W BNA3P47039 444 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W USE1P53146 245 aa2.44□□□□□ -2.02
TRA1YHR099W ARG5,6Q01217 863 aa2.44□□□□□ -2.02
TRA1YHR099W EGD1Q02642 157 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W NUP53Q03790 475 aa2.44□□□□□ -2.02
TRA1YHR099W TPO4Q12256 659 aa2.44□□□□□ -2.02
TRA1YHR099W YDL007C-AQ2V2Q0 85 aa2.44□□□□□ -2.02
TRA1YHR099W KRS1P15180 591 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W NAT2P37293 288 aa2.44□□□□□ -2.02
TRA1YHR099W YBL028CP38202 106 aa2.44□□□□□ -2.02
TRA1YHR099W RBG1P39729 369 aa2.44□□□□□ -2.02
TRA1YHR099W DIM1P41819 318 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W RSM7P47150 247 aa2.44□□□□□ -2.02
TRA1YHR099W IMA1P53051 589 aa2.44□□□□□ -2.02
TRA1YHR099W SND1Q04007 877 aa2.44□□□□□ -2.02
TRA1YHR099W UTP4Q06679 776 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W DSE3Q08729 430 aa2.44□□□□□ -2.02
TRA1YHR099W RHO2P06781 192 aa2.44□□□□□ -2.02
TRA1YHR099W PHO4P07270 312 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W TUB3P09734 445 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W SNF5P18480 905 aa2.44□□□□□ -2.02
TRA1YHR099W ADE2P21264 571 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W NPL4P33755 580 aa2.44□□□□□ -2.02
TRA1YHR099W SKT5P34226 696 aa2.44□□□□□ -2.02
TRA1YHR099W SCD5P34758 872 aa2.44□□□□□ -2.02
TRA1YHR099W ELO3P40319 345 aa2.44□□□□□ -2.02
TRA1YHR099W NEO1P40527 1151 aa2.44□□□□□ -2.02
TRA1YHR099W SHR3Q02774 210 aa2.44□□□□□ -2.02
TRA1YHR099W RRN11Q04712 507 aa2.44□□□□□ -2.02
TRA1YHR099W PCL9Q12477 304 aa2.44□□□□□ -2.02
TRA1YHR099W CHC1P22137 1653 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W GPH1P06738 902 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W TUB1P09733 447 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W OLE1P21147 510 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W AGP1P25376 633 aa2.44□□□□□ -2.02
TRA1YHR099W GBP2P25555 427 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
TRA1YHR099W AAR2P32357 355 aaPredicted RBP2.44□□□□□ -2.02
TRA1YHR099W PPG1P32838 368 aa2.44□□□□□ -2.02
TRA1YHR099W LOS1P33418 1100 aaPredicted RBP2.44□□□□□ -2.02
TRA1YHR099W QDR2P40474 542 aa2.44□□□□□ -2.02
TRA1YHR099W ATG21Q02887 496 aa2.44□□□□□ -2.02
TRA1YHR099W YLR346CQ06139 101 aa2.44□□□□□ -2.02
TRA1YHR099W APC2Q12440 853 aa2.44□□□□□ -2.02
TRA1YHR099W CTT1P06115 562 aa2.44□□□□□ -2.02
TRA1YHR099W CAP2P13517 287 aa2.44□□□□□ -2.02
TRA1YHR099W CLN1P20437 546 aa2.44□□□□□ -2.02
TRA1YHR099W ILV6P25605 309 aaKnown RBP2.44□□□□□ -2.02
TRA1YHR099W SIP1P32578 815 aa2.44□□□□□ -2.02
TRA1YHR099W FRD1P32614 470 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms