RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W MFM1Q02783 413 aa2.39□□□□□ -2.03
CBF2YGR140W RXT3Q07458 294 aa2.39□□□□□ -2.03
CBF2YGR140W YDR061WQ12298 539 aa2.39□□□□□ -2.03
CBF2YGR140W YPT6Q99260 215 aa2.39□□□□□ -2.03
CBF2YGR140W YLR278CQ05854 1341 aa2.39□□□□□ -2.03
CBF2YGR140W TPK2P06245 380 aa2.38□□□□□ -2.03
CBF2YGR140W TUB3P09734 445 aaKnown RBP2.38□□□□□ -2.03
CBF2YGR140W ABF1P14164 731 aa2.38□□□□□ -2.03
CBF2YGR140W APE1P14904 514 aa2.38□□□□□ -2.03
CBF2YGR140W ERG6P25087 383 aaKnown RBP2.38□□□□□ -2.03
CBF2YGR140W LRE1P25579 583 aaKnown RBP2.38□□□□□ -2.03
CBF2YGR140W YCR061WP25639 631 aa2.38□□□□□ -2.03
CBF2YGR140W STE14P32584 239 aa2.38□□□□□ -2.03
CBF2YGR140W RIB7P33312 244 aa2.38□□□□□ -2.03
CBF2YGR140W LTV1P34078 463 aa2.38□□□□□ -2.03
CBF2YGR140W CMC1P36064 111 aa2.38□□□□□ -2.03
CBF2YGR140W DAD2P36162 133 aa2.38□□□□□ -2.03
CBF2YGR140W TIF5P38431 405 aaKnown RBP2.38□□□□□ -2.03
CBF2YGR140W BUR6P40096 142 aa2.38□□□□□ -2.03
CBF2YGR140W LRO1P40345 661 aa2.38□□□□□ -2.03
CBF2YGR140W MET12P46151 657 aa2.38□□□□□ -2.03
CBF2YGR140W DLD2P46681 530 aaKnown RBP2.38□□□□□ -2.03
CBF2YGR140W PRY1P47032 299 aa2.38□□□□□ -2.03
CBF2YGR140W COS12P53053 380 aa2.38□□□□□ -2.03
CBF2YGR140W YGR054WP53235 642 aaKnown RBP2.38□□□□□ -2.03
CBF2YGR140W YGR079WP53249 370 aa2.38□□□□□ -2.03
CBF2YGR140W TWF1P53250 332 aa2.38□□□□□ -2.03
CBF2YGR140W INN1P53901 409 aa2.38□□□□□ -2.03
CBF2YGR140W ARP5P53946 755 aa2.38□□□□□ -2.03
CBF2YGR140W ECM22Q05958 814 aaPredicted RBP2.38□□□□□ -2.03
CBF2YGR140W VTA1Q06263 330 aa2.38□□□□□ -2.03
CBF2YGR140W YPL216WQ08964 1102 aa2.38□□□□□ -2.03
CBF2YGR140W KEL3Q08979 651 aaPredicted RBP2.38□□□□□ -2.03
CBF2YGR140W VPS54Q12071 889 aa2.38□□□□□ -2.03
CBF2YGR140W KAR3P17119 729 aa2.38□□□□□ -2.03
CBF2YGR140W PRP4P20053 465 aaKnown RBP2.38□□□□□ -2.03
CBF2YGR140W YCR015CP25616 317 aa2.38□□□□□ -2.03
CBF2YGR140W ERV1P27882 189 aa2.38□□□□□ -2.03
CBF2YGR140W SYN8P31377 255 aa2.38□□□□□ -2.03
CBF2YGR140W GYP6P32806 458 aa2.38□□□□□ -2.03
CBF2YGR140W NTC20P38302 140 aaPredicted RBP2.38□□□□□ -2.03
CBF2YGR140W ETP1P38748 585 aaKnown RBP2.38□□□□□ -2.03
CBF2YGR140W RRF1P38771 230 aa2.38□□□□□ -2.03
CBF2YGR140W YHR218WP38899 603 aa2.38□□□□□ -2.03
CBF2YGR140W VPS45P38932 577 aa2.38□□□□□ -2.03
CBF2YGR140W NUP60P39705 539 aa2.38□□□□□ -2.03
CBF2YGR140W YIL089WP40500 205 aa2.38□□□□□ -2.03
CBF2YGR140W YIR042CP40586 236 aa2.38□□□□□ -2.03
CBF2YGR140W CTK2P46962 323 aa2.38□□□□□ -2.03
CBF2YGR140W RFX1P48743 811 aa2.38□□□□□ -2.03
CBF2YGR140W INP52P50942 1183 aa2.38□□□□□ -2.03
CBF2YGR140W MTL1P53214 551 aa2.38□□□□□ -2.03
CBF2YGR140W SNO2P53823 222 aa2.38□□□□□ -2.03
CBF2YGR140W TOF1P53840 1238 aa2.38□□□□□ -2.03
CBF2YGR140W FRE5Q08908 694 aa2.38□□□□□ -2.03
CBF2YGR140W RPN5Q12250 445 aaKnown RBP2.38□□□□□ -2.03
CBF2YGR140W HER1Q12276 1246 aa2.38□□□□□ -2.03
CBF2YGR140W HXK2P04807 486 aaKnown RBP2.37□□□□□ -2.03
CBF2YGR140W PDE2P06776 526 aa2.37□□□□□ -2.03
CBF2YGR140W PDA1P16387 420 aaKnown RBP2.37□□□□□ -2.03
CBF2YGR140W GAR1P28007 205 aaKnown RBP2.37□□□□□ -2.03
CBF2YGR140W BCS1P32839 456 aa2.37□□□□□ -2.03
CBF2YGR140W SIF2P38262 535 aa2.37□□□□□ -2.03
CBF2YGR140W MUP3P38734 546 aa2.37□□□□□ -2.03
CBF2YGR140W TCB2P48231 1178 aa2.37□□□□□ -2.03
CBF2YGR140W BPL1P48445 690 aaPredicted RBP2.37□□□□□ -2.03
CBF2YGR140W MSE1P48525 536 aa2.37□□□□□ -2.03
CBF2YGR140W BOP3P53958 396 aa2.37□□□□□ -2.03
CBF2YGR140W TLG1Q03322 224 aa2.37□□□□□ -2.03
CBF2YGR140W RQC1Q05468 723 aaKnown RBP2.37□□□□□ -2.03
CBF2YGR140W HEL2Q05580 639 aaKnown RBP2.37□□□□□ -2.03
CBF2YGR140W SGT2Q12118 346 aaKnown RBP2.37□□□□□ -2.03
CBF2YGR140W PFK27Q12471 397 aaPredicted RBP2.37□□□□□ -2.03
CBF2YGR140W SKS1Q12505 502 aa2.37□□□□□ -2.03
CBF2YGR140W SGS1P35187 1447 aa2.37□□□□□ -2.03
CBF2YGR140W ARD1P07347 238 aaPredicted RBP2.37□□□□□ -2.03
CBF2YGR140W PUT4P15380 627 aa2.37□□□□□ -2.03
CBF2YGR140W URA7P28274 579 aaKnown RBP2.37□□□□□ -2.03
CBF2YGR140W YEL043WP32618 956 aa2.37□□□□□ -2.03
CBF2YGR140W YME1P32795 747 aa2.37□□□□□ -2.03
CBF2YGR140W HIS7P33734 552 aaKnown RBP2.37□□□□□ -2.03
CBF2YGR140W PMT1P33775 817 aa2.37□□□□□ -2.03
CBF2YGR140W YNL058CP53947 316 aa2.37□□□□□ -2.03
CBF2YGR140W YAT1P80235 687 aa2.37□□□□□ -2.03
CBF2YGR140W HOT1Q03213 719 aa2.37□□□□□ -2.03
CBF2YGR140W GTB1Q04924 702 aa2.37□□□□□ -2.03
CBF2YGR140W DON1Q05610 365 aa2.37□□□□□ -2.03
CBF2YGR140W MRD1Q06106 887 aaKnown RBP2.37□□□□□ -2.03
CBF2YGR140W CRN1Q06440 651 aa2.37□□□□□ -2.03
CBF2YGR140W CEX1Q12453 761 aa2.37□□□□□ -2.03
CBF2YGR140W YBR255C-AQ3E776 120 aa2.37□□□□□ -2.03
CBF2YGR140W POT1P27796 417 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
CBF2YGR140W PDB1P32473 366 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W LHS1P36016 881 aa2.36□□□□□ -2.03
CBF2YGR140W KAE1P36132 386 aa2.36□□□□□ -2.03
CBF2YGR140W RRT2P38332 387 aa2.36□□□□□ -2.03
CBF2YGR140W GND1P38720 489 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W YTA12P40341 825 aa2.36□□□□□ -2.03
CBF2YGR140W EPL1P43572 832 aa2.36□□□□□ -2.03
CBF2YGR140W AMA1P50082 593 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms