RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W LYS9P38999 446 aa6.57□□□□□ -1.36
MSP1YGR028W MEF2P39677 819 aa6.57□□□□□ -1.36
MSP1YGR028W SIT1P39980 628 aa6.57□□□□□ -1.36
MSP1YGR028W TMN3P40071 706 aa6.57□□□□□ -1.36
MSP1YGR028W TMA108P40462 946 aa6.57□□□□□ -1.36
MSP1YGR028W YIL054WP40524 105 aa6.57□□□□□ -1.36
MSP1YGR028W FLC3P53121 802 aa6.57□□□□□ -1.36
MSP1YGR028W ERP6P53198 216 aa6.57□□□□□ -1.36
MSP1YGR028W YGR111WP53265 400 aa6.57□□□□□ -1.36
MSP1YGR028W YSH1Q06224 779 aaPredicted RBP6.57□□□□□ -1.36
MSP1YGR028W RPS13P05756 151 aaKnown RBP6.56□□□□□ -1.36
MSP1YGR028W SEC63P14906 663 aa6.56□□□□□ -1.36
MSP1YGR028W EST1P17214 699 aaPredicted RBP6.56□□□□□ -1.36
MSP1YGR028W PHO13P19881 312 aa6.56□□□□□ -1.36
MSP1YGR028W AAR2P32357 355 aaPredicted RBP6.56□□□□□ -1.36
MSP1YGR028W RML2P32611 393 aa6.56□□□□□ -1.36
MSP1YGR028W MRPL10P36520 322 aa6.56□□□□□ -1.36
MSP1YGR028W TAT2P38967 592 aa6.56□□□□□ -1.36
MSP1YGR028W PCF11P39081 626 aaPredicted RBP6.56□□□□□ -1.36
MSP1YGR028W SER33P40510 469 aa6.56□□□□□ -1.36
MSP1YGR028W TFG2P41896 400 aaPredicted RBP6.56□□□□□ -1.36
MSP1YGR028W AMA1P50082 593 aa6.56□□□□□ -1.36
MSP1YGR028W VPS75P53853 264 aa6.56□□□□□ -1.36
MSP1YGR028W TDA7P53882 636 aaPredicted RBP6.56□□□□□ -1.36
MSP1YGR028W AQR1P53943 586 aa6.56□□□□□ -1.36
MSP1YGR028W ATG9Q12142 997 aa6.56□□□□□ -1.36
MSP1YGR028W HIS1P00498 297 aaKnown RBP6.55□□□□□ -1.36
MSP1YGR028W ADY2P25613 283 aa6.55□□□□□ -1.36
MSP1YGR028W AIM3P38266 947 aaKnown RBP6.55□□□□□ -1.36
MSP1YGR028W FSH1P38777 243 aaKnown RBP6.55□□□□□ -1.36
MSP1YGR028W SMC2P38989 1170 aaKnown RBP6.55□□□□□ -1.36
MSP1YGR028W YMR124WP39523 943 aaKnown RBP6.55□□□□□ -1.36
MSP1YGR028W EXO1P39875 702 aa6.55□□□□□ -1.36
MSP1YGR028W EDC3P39998 551 aaKnown RBP6.55□□□□□ -1.36
MSP1YGR028W SNG1P46950 547 aa6.55□□□□□ -1.36
MSP1YGR028W PEX31P53203 462 aa6.55□□□□□ -1.36
MSP1YGR028W YDR132CQ03900 495 aa6.55□□□□□ -1.36
MSP1YGR028W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
MSP1YGR028W THI21Q08975 551 aa6.55□□□□□ -1.36
MSP1YGR028W PER33Q12144 273 aa6.55□□□□□ -1.36
MSP1YGR028W HXT3P32466 567 aaKnown RBP6.54□□□□□ -1.36
MSP1YGR028W DOM34P33309 386 aa6.54□□□□□ -1.36
MSP1YGR028W SRX1P36077 127 aa6.54□□□□□ -1.36
MSP1YGR028W GIC1P38785 314 aa6.54□□□□□ -1.36
MSP1YGR028W PRM9P39551 298 aa6.54□□□□□ -1.36
MSP1YGR028W STL1P39932 569 aa6.54□□□□□ -1.36
MSP1YGR028W KHA1P40309 873 aa6.54□□□□□ -1.36
MSP1YGR028W ASN2P49090 572 aaKnown RBP6.54□□□□□ -1.36
MSP1YGR028W YDR278CQ05612 105 aa6.54□□□□□ -1.36
MSP1YGR028W RXT3Q07458 294 aa6.54□□□□□ -1.36
MSP1YGR028W YLR012CQ07927 99 aa6.54□□□□□ -1.36
MSP1YGR028W YLR046CQ12253 270 aa6.54□□□□□ -1.36
MSP1YGR028W DAL81P21657 970 aa6.53□□□□□ -1.36
MSP1YGR028W TRX1P22217 103 aaKnown RBP6.53□□□□□ -1.36
MSP1YGR028W GEX1P25596 615 aa6.53□□□□□ -1.36
MSP1YGR028W SPC110P32380 944 aa6.53□□□□□ -1.36
MSP1YGR028W GEX2P36173 615 aa6.53□□□□□ -1.36
MSP1YGR028W SWC5P38326 303 aa6.53□□□□□ -1.36
MSP1YGR028W CRP1P38845 465 aaKnown RBP6.53□□□□□ -1.36
MSP1YGR028W BAT1P38891 393 aaKnown RBP6.53□□□□□ -1.36
MSP1YGR028W AIM23P47015 356 aa6.53□□□□□ -1.36
MSP1YGR028W TRF5P48561 642 aaKnown RBP6.53□□□□□ -1.36
MSP1YGR028W EMC4P53073 190 aa6.53□□□□□ -1.36
MSP1YGR028W PIR1Q03178 341 aa6.53□□□□□ -1.36
MSP1YGR028W ROT1Q03691 256 aa6.53□□□□□ -1.36
MSP1YGR028W SND1Q04007 877 aa6.53□□□□□ -1.36
MSP1YGR028W SXM1Q04175 944 aaKnown RBP6.53□□□□□ -1.36
MSP1YGR028W EAF1Q06337 982 aa6.53□□□□□ -1.36
MSP1YGR028W ROX1P25042 368 aa6.52□□□□□ -1.37
MSP1YGR028W RRP43P25359 394 aaPredicted RBP6.52□□□□□ -1.37
MSP1YGR028W CCR4P31384 837 aaKnown RBP6.52□□□□□ -1.37
MSP1YGR028W PXA2P34230 853 aa6.52□□□□□ -1.37
MSP1YGR028W THI80P35202 319 aa6.52□□□□□ -1.37
MSP1YGR028W MRPL40P36534 297 aa6.52□□□□□ -1.37
MSP1YGR028W SRP68P38687 599 aaKnown RBP6.52□□□□□ -1.37
MSP1YGR028W SET5P38890 526 aaKnown RBP6.52□□□□□ -1.37
MSP1YGR028W TIF34P40217 347 aaKnown RBP6.52□□□□□ -1.37
MSP1YGR028W YJR061WP40355 935 aa6.52□□□□□ -1.37
MSP1YGR028W ASG1P40467 964 aa6.52□□□□□ -1.37
MSP1YGR028W ALR2P43553 858 aa6.52□□□□□ -1.37
MSP1YGR028W RRT5P43607 289 aa6.52□□□□□ -1.37
MSP1YGR028W MNN10P50108 393 aaKnown RBP6.52□□□□□ -1.37
MSP1YGR028W EAF7P53911 425 aaKnown RBP6.52□□□□□ -1.37
MSP1YGR028W YNL040WP53960 456 aaPredicted RBP6.52□□□□□ -1.37
MSP1YGR028W PLB2Q03674 706 aa6.52□□□□□ -1.37
MSP1YGR028W APL4Q12028 832 aa6.52□□□□□ -1.37
MSP1YGR028W NUM1Q00402 2748 aa6.51□□□□□ -1.37
MSP1YGR028W CUP1-1P0CX80 61 aa6.51□□□□□ -1.37
MSP1YGR028W CUP1-2P0CX81 61 aa6.51□□□□□ -1.37
MSP1YGR028W YPK1P12688 680 aaKnown RBP6.51□□□□□ -1.37
MSP1YGR028W HSP60P19882 572 aaKnown RBP6.51□□□□□ -1.37
MSP1YGR028W TFB1P32776 642 aa6.51□□□□□ -1.37
MSP1YGR028W UTH1P36135 365 aa6.51□□□□□ -1.37
MSP1YGR028W WSC4P38739 605 aa6.51□□□□□ -1.37
MSP1YGR028W YEL028WP39989 153 aa6.51□□□□□ -1.37
MSP1YGR028W ZRG8P40021 1076 aa6.51□□□□□ -1.37
MSP1YGR028W YER158CP40095 573 aa6.51□□□□□ -1.37
MSP1YGR028W MND2P40577 368 aa6.51□□□□□ -1.37
MSP1YGR028W TIM54P47045 478 aa6.51□□□□□ -1.37
MSP1YGR028W MRX6P48564 524 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms