RNA–Protein interactions for RNA: YFL048C

EMP47, Transcript of Integral membrane component of ER-derived COPII-coated vesicles, yeast

Gene EMP47, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EMP47	YFL048C	UBP13	P38187	747 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	RFC3	P38629	340 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	STN1	P38960	494 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	OAF1	P39720	1047 aa	Predicted RBP	4.38	□□□□□ -1.71
EMP47	YFL048C	YMR134W	P40207	237 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	MKT1	P40850	830 aa	Known RBP	4.38	□□□□□ -1.71
EMP47	YFL048C	GPD2	P41911	440 aa	Known RBP	4.38	□□□□□ -1.71
EMP47	YFL048C	BNA2	P47125	453 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	VPS4	P52917	437 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	LGE1	Q02796	332 aa	Known RBP	4.38	□□□□□ -1.71
EMP47	YFL048C	MUK1	Q02866	612 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	CEF1	Q03654	590 aa	Predicted RBP	4.38	□□□□□ -1.71
EMP47	YFL048C	ATG16	Q03818	150 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	YKU80	Q04437	629 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	UFO1	Q04511	668 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	ASM4	Q05166	528 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	GRX6	Q12438	231 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	OCA6	Q12454	224 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	RRD2	Q12461	358 aa		4.38	□□□□□ -1.71
EMP47	YFL048C	RPL24A	P04449	155 aa	Known RBP	4.37	□□□□□ -1.71
EMP47	YFL048C	CIT2	P08679	460 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	DAL2	P25335	343 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	MGT1	P26188	188 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	SIN4	P32259	974 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	THI4	P32318	326 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	CBF2	P32504	956 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	TOA1	P32773	286 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	YSC83	P32792	385 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	TFC3	P34111	1160 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	POP4	P38336	279 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	DSS1	P39112	969 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	GVP36	P40531	326 aa	Known RBP	4.37	□□□□□ -1.71
EMP47	YFL048C	SEC27	P41811	889 aa	Known RBP	4.37	□□□□□ -1.71
EMP47	YFL048C	YFL052W	P43551	465 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	YGL039W	P53183	348 aa	Known RBP	4.37	□□□□□ -1.71
EMP47	YFL048C	COG6	P53959	839 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	RPA49	Q01080	415 aa	Predicted RBP	4.37	□□□□□ -1.71
EMP47	YFL048C	GIS1	Q03833	894 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	PPM1	Q04081	328 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	HFD1	Q04458	532 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	GAD1	Q04792	585 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	GTB1	Q04924	702 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	DON1	Q05610	365 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	GPN2	Q08726	347 aa	Predicted RBP	4.37	□□□□□ -1.71
EMP47	YFL048C	RTP1	Q12751	981 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	YPT6	Q99260	215 aa		4.37	□□□□□ -1.71
EMP47	YFL048C	RAD10	P06838	210 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	AEP2	P22136	580 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	MRPL25	P23369	157 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	SPS22	P25380	463 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	RAD51	P25454	400 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	VBA3	P25594	458 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	AAD3	P25612	363 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	RPC19	P28000	142 aa	Known RBP	4.36	□□□□□ -1.71
EMP47	YFL048C	MUD1	P32605	298 aa	Known RBP	4.36	□□□□□ -1.71
EMP47	YFL048C	GYP6	P32806	458 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	MRE11	P32829	692 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	PEX6	P33760	1030 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	DUG2	P38149	878 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	MRX3	P38172	270 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	LIN1	P38852	340 aa	Predicted RBP	4.36	□□□□□ -1.71
EMP47	YFL048C	SPC97	P38863	823 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	PFK26	P40433	827 aa	Known RBP	4.36	□□□□□ -1.71
EMP47	YFL048C	FIS1	P40515	155 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	CTR1	P49573	406 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	TAF6	P53040	516 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	NPY1	P53164	384 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	HOP2	P53187	214 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	TAM41	P53230	385 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	CNM67	P53865	581 aa	Known RBP	4.36	□□□□□ -1.71
EMP47	YFL048C	YMR027W	Q04371	470 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	CUR1	Q06469	252 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	VHS3	Q08438	674 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	ABP140	Q08641	628 aa	Known RBP	4.36	□□□□□ -1.71
EMP47	YFL048C	YLR149C	Q99296	730 aa		4.36	□□□□□ -1.71
EMP47	YFL048C	PGK1	P00560	416 aa	Known RBP	4.35	□□□□□ -1.71
EMP47	YFL048C	PMS1	P14242	873 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	SFL1	P20134	766 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
EMP47	YFL048C	MEF1	P25039	761 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	ICL1	P28240	557 aa	Predicted RBP	4.35	□□□□□ -1.71
EMP47	YFL048C	PUP2	P32379	260 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	HOG1	P32485	435 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	HSL7	P38274	827 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	SMF2	P38778	549 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	FMP52	P40008	231 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	ALG5	P40350	334 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	HOS4	P40480	1083 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	BAP3	P41815	604 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	QRI1	P43123	477 aa	Known RBP	4.35	□□□□□ -1.71
EMP47	YFL048C	CPR7	P47103	393 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	RNR4	P49723	345 aa	Known RBP	4.35	□□□□□ -1.71
EMP47	YFL048C	YML6	P51998	286 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	USE1	P53146	245 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	COS6	P53344	381 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	TEX1	P53851	422 aa	Known RBP	4.35	□□□□□ -1.71
EMP47	YFL048C	KTR5	P53966	522 aa	Predicted RBP	4.35	□□□□□ -1.71
EMP47	YFL048C	PTA1	Q01329	785 aa	Predicted RBP	4.35	□□□□□ -1.71
EMP47	YFL048C	OSH6	Q02201	448 aa		4.35	□□□□□ -1.71
EMP47	YFL048C	NHX1	Q04121	633 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms