RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C MRX6P48564 524 aa5.78□□□□□ -1.48
SEC20YDR498C RNR4P49723 345 aaKnown RBP5.78□□□□□ -1.48
SEC20YDR498C AMA1P50082 593 aa5.78□□□□□ -1.48
SEC20YDR498C COQ6P53318 479 aa5.78□□□□□ -1.48
SEC20YDR498C SIW14P53965 281 aa5.78□□□□□ -1.48
SEC20YDR498C TRS31Q03337 283 aa5.78□□□□□ -1.48
SEC20YDR498C YMR155WQ03795 547 aa5.78□□□□□ -1.48
SEC20YDR498C YDR131CQ03899 556 aa5.78□□□□□ -1.48
SEC20YDR498C YDR132CQ03900 495 aa5.78□□□□□ -1.48
SEC20YDR498C YET2Q04210 160 aa5.78□□□□□ -1.48
SEC20YDR498C YML083CQ04526 418 aa5.78□□□□□ -1.48
SEC20YDR498C SYT1Q06836 1226 aa5.78□□□□□ -1.48
SEC20YDR498C SPE3Q12074 293 aaKnown RBP5.78□□□□□ -1.48
SEC20YDR498C HOS1Q12214 470 aa5.78□□□□□ -1.48
SEC20YDR498C YPL247CQ12523 523 aa5.78□□□□□ -1.48
SEC20YDR498C STE2D6VTK4 431 aa5.77□□□□□ -1.49
SEC20YDR498C MAS1P10507 462 aa5.77□□□□□ -1.49
SEC20YDR498C HSP60P19882 572 aaKnown RBP5.77□□□□□ -1.49
SEC20YDR498C MEF1P25039 761 aa5.77□□□□□ -1.49
SEC20YDR498C SNT1P25357 1226 aa5.77□□□□□ -1.49
SEC20YDR498C SPS22P25380 463 aa5.77□□□□□ -1.49
SEC20YDR498C MKS1P34072 584 aa5.77□□□□□ -1.49
SEC20YDR498C LRG1P35688 1017 aa5.77□□□□□ -1.49
SEC20YDR498C PHO11P35842 467 aa5.77□□□□□ -1.49
SEC20YDR498C FZO1P38297 855 aa5.77□□□□□ -1.49
SEC20YDR498C PHO12P38693 467 aa5.77□□□□□ -1.49
SEC20YDR498C SFB3P38810 929 aa5.77□□□□□ -1.49
SEC20YDR498C CRP1P38845 465 aaKnown RBP5.77□□□□□ -1.49
SEC20YDR498C SEC31P38968 1273 aaKnown RBP5.77□□□□□ -1.49
SEC20YDR498C MNN1P39106 762 aa5.77□□□□□ -1.49
SEC20YDR498C SLX8P40072 274 aa5.77□□□□□ -1.49
SEC20YDR498C ROK1P45818 564 aaPredicted RBP5.77□□□□□ -1.49
SEC20YDR498C RCF2P53721 224 aa5.77□□□□□ -1.49
SEC20YDR498C REG1Q00816 1014 aa5.77□□□□□ -1.49
SEC20YDR498C TAF11Q04226 346 aa5.77□□□□□ -1.49
SEC20YDR498C YCS4Q06156 1176 aa5.77□□□□□ -1.49
SEC20YDR498C YDL073WQ07454 984 aa5.77□□□□□ -1.49
SEC20YDR498C DIA2Q08496 732 aaPredicted RBP5.77□□□□□ -1.49
SEC20YDR498C MRH1Q12117 320 aaPredicted RBP5.77□□□□□ -1.49
SEC20YDR498C SVS1Q12254 260 aa5.77□□□□□ -1.49
SEC20YDR498C FAB1P34756 2278 aa5.76□□□□□ -1.49
SEC20YDR498C SPE1P08432 466 aa5.76□□□□□ -1.49
SEC20YDR498C NDI1P32340 513 aa5.76□□□□□ -1.49
SEC20YDR498C RIM1P32445 135 aaKnown RBP5.76□□□□□ -1.49
SEC20YDR498C SEC6P32844 805 aa5.76□□□□□ -1.49
SEC20YDR498C TSA1P34760 196 aaKnown RBP5.76□□□□□ -1.49
SEC20YDR498C YHR131CP38835 850 aa5.76□□□□□ -1.49
SEC20YDR498C NUP60P39705 539 aa5.76□□□□□ -1.49
SEC20YDR498C FMP10P40098 244 aa5.76□□□□□ -1.49
SEC20YDR498C YJR061WP40355 935 aa5.76□□□□□ -1.49
SEC20YDR498C TES1P41903 349 aaKnown RBP5.76□□□□□ -1.49
SEC20YDR498C VPS25P47142 202 aa5.76□□□□□ -1.49
SEC20YDR498C MRM2P53123 320 aa5.76□□□□□ -1.49
SEC20YDR498C NOP15P53927 220 aaPredicted RBP5.76□□□□□ -1.49
SEC20YDR498C RLI1Q03195 608 aaKnown RBP5.76□□□□□ -1.49
SEC20YDR498C GAS3Q03655 524 aa5.76□□□□□ -1.49
SEC20YDR498C SNX3Q08826 162 aaKnown RBP5.76□□□□□ -1.49
SEC20YDR498C NDD1Q08887 554 aa5.76□□□□□ -1.49
SEC20YDR498C SLH1P53327 1967 aaKnown RBP5.75□□□□□ -1.49
SEC20YDR498C RHO2P06781 192 aa5.75□□□□□ -1.49
SEC20YDR498C SPS1P08458 490 aa5.75□□□□□ -1.49
SEC20YDR498C MIS1P09440 975 aaKnown RBP5.75□□□□□ -1.49
SEC20YDR498C MPH2P0CD99 609 aa5.75□□□□□ -1.49
SEC20YDR498C PRP6P19735 899 aaPredicted RBP5.75□□□□□ -1.49
SEC20YDR498C PWP1P21304 576 aaKnown RBP5.75□□□□□ -1.49
SEC20YDR498C PDE1P22434 369 aa5.75□□□□□ -1.49
SEC20YDR498C YCR099CP25657 155 aa5.75□□□□□ -1.49
SEC20YDR498C MRPL9P31334 269 aa5.75□□□□□ -1.49
SEC20YDR498C PYC2P32327 1180 aaKnown RBP5.75□□□□□ -1.49
SEC20YDR498C MRE11P32829 692 aa5.75□□□□□ -1.49
SEC20YDR498C TFC3P34111 1160 aa5.75□□□□□ -1.49
SEC20YDR498C ASK1P35734 292 aa5.75□□□□□ -1.49
SEC20YDR498C IRS4P36115 615 aaKnown RBP5.75□□□□□ -1.49
SEC20YDR498C MRP21P38175 177 aa5.75□□□□□ -1.49
SEC20YDR498C MSC7P38694 644 aa5.75□□□□□ -1.49
SEC20YDR498C MUP3P38734 546 aa5.75□□□□□ -1.49
SEC20YDR498C YHL008CP38750 627 aa5.75□□□□□ -1.49
SEC20YDR498C YHR182WP38870 785 aa5.75□□□□□ -1.49
SEC20YDR498C IST3P40565 148 aaPredicted RBP5.75□□□□□ -1.49
SEC20YDR498C VMA13P41807 478 aaKnown RBP5.75□□□□□ -1.49
SEC20YDR498C BUD13P46947 266 aaPredicted RBP5.75□□□□□ -1.49
SEC20YDR498C YJR154WP47181 346 aa5.75□□□□□ -1.49
SEC20YDR498C TIS11P47977 285 aa5.75□□□□□ -1.49
SEC20YDR498C MET13P53128 600 aa5.75□□□□□ -1.49
SEC20YDR498C YNL058CP53947 316 aa5.75□□□□□ -1.49
SEC20YDR498C LGE1Q02796 332 aaKnown RBP5.75□□□□□ -1.49
SEC20YDR498C PIR1Q03178 341 aa5.75□□□□□ -1.49
SEC20YDR498C DFG5Q05031 458 aa5.75□□□□□ -1.49
SEC20YDR498C HDA3Q06623 655 aa5.75□□□□□ -1.49
SEC20YDR498C ADY3Q07732 790 aa5.75□□□□□ -1.49
SEC20YDR498C PGC1Q08959 321 aa5.75□□□□□ -1.49
SEC20YDR498C YPR202WQ08993 238 aa5.75□□□□□ -1.49
SEC20YDR498C UBX3Q12229 455 aa5.75□□□□□ -1.49
SEC20YDR498C NSP1P14907 823 aaKnown RBP5.74□□□□□ -1.49
SEC20YDR498C REC107P21651 314 aa5.74□□□□□ -1.49
SEC20YDR498C MRPL8P22353 238 aa5.74□□□□□ -1.49
SEC20YDR498C SAN1P22470 610 aa5.74□□□□□ -1.49
SEC20YDR498C PPH22P23595 377 aa5.74□□□□□ -1.49
SEC20YDR498C URK1P27515 501 aa5.74□□□□□ -1.49
SEC20YDR498C DGR2P32330 852 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms