RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	IRC3	Q06683	689 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	YPD1	Q07688	167 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	OSW1	Q08692	278 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	FEX1	Q08913	375 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	HER1	Q12276	1246 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	GRX6	Q12438	231 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	AVL9	Q12500	764 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	MF(ALPHA)1	P01149	165 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	ARG4	P04076	463 aa	Predicted RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	TUB1	P09733	447 aa	Known RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	MRP2	P10663	115 aa	Predicted RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	MSD1	P15179	658 aa	Known RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	POL30	P15873	258 aa	Known RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	PRP6	P19735	899 aa	Predicted RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	HNM1	P19807	563 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	ISY1	P21374	235 aa	Predicted RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	CMK2	P22517	447 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	OCA4	P25366	362 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	TPS2	P31688	896 aa	Known RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	SAC6	P32599	642 aa	Known RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	MRS6	P32864	603 aa	Known RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	UBP11	P36026	717 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	KAE1	P36132	386 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	MRPL17	P36528	281 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	MEF2	P39677	819 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	SAH1	P39954	449 aa	Known RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	RPH1	P39956	796 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	VFA1	P40080	203 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	PSF2	P40359	213 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	COS4	P43542	379 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	SNZ3	P43545	298 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	EPL1	P43572	832 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	COS5	P47187	383 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	RMR1	P53060	241 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	COS1	P53822	381 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	SNZ2	P53824	298 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	TOF1	P53840	1238 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	GIM3	P53900	129 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	VAC7	P53950	1165 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	KAP120	Q02932	1032 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	SPC2	Q04969	178 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	YMR226C	Q05016	267 aa	Known RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	SPO77	Q06134	477 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	MLC2	Q06580	163 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	YPR196W	Q06595	470 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	YPR091C	Q06833	770 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	SPO75	Q07798	868 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	FMP25	Q08023	583 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	SSP2	Q08646	371 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	YOR214C	Q12282	236 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	ATG34	Q12292	412 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	DBP10	Q12389	995 aa	Known RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	ERP4	Q12450	207 aa		4.63	□□□□□ -1.67
TFB3	YDR460W	RRP36	Q12481	300 aa	Predicted RBP	4.63	□□□□□ -1.67
TFB3	YDR460W	CYB2	P00175	591 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	RPL24A	P04449	155 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	RPL11A	P0C0W9	174 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	YGL041W-A	P0C5N3	154 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	SSB1	P11484	613 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	RAP1	P11938	827 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	CMP2	P14747	604 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	DBP3	P20447	523 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	RVS161	P25343	265 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	RPL8B	P29453	256 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	NTG1	P31378	399 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	VMA6	P32366	345 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	XRS2	P33301	854 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	BUD2	P33314	1104 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	NIC96	P34077	839 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	SPC42	P36094	363 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	SET3	P36124	751 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	AKL1	P38080	1108 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	YHR112C	P38716	378 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	UTP9	P38882	575 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	PNT1	P38969	423 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	SSP120	P39931	234 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	AST2	P39945	430 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	SSB2	P40150	613 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	SMX2	P40204	77 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	PFK26	P40433	827 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	ELP2	P42935	788 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	MAL11	P53048	616 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	PEF1	P53238	335 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	YGR117C	P53270	476 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	CPR6	P53691	371 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	RRN5	Q02983	363 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	TAF9	Q05027	157 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	ECI1	Q05871	280 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
TFB3	YDR460W	DIS3	Q08162	1001 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	SKM1	Q12469	655 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	GLT1	Q12680	2145 aa	Known RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	CSR2	Q12734	1121 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	ADF1	Q2V2Q1	113 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	RPL11B	Q3E757	174 aa	Predicted RBP	4.62	□□□□□ -1.67
TFB3	YDR460W	CMC2	Q3E7A4	109 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	LAG2	Q92325	660 aa		4.62	□□□□□ -1.67
TFB3	YDR460W	VPS13	Q07878	3144 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	ADE8	P04161	214 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	HMG2	P12684	1045 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms