RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C SRP54P20424 541 aaKnown RBP5.3□□□□□ -1.56
LSM6YDR378C MBR1P23493 339 aa5.3□□□□□ -1.56
LSM6YDR378C MUD2P36084 527 aaKnown RBP5.3□□□□□ -1.56
LSM6YDR378C ADE17P38009 592 aaKnown RBP5.3□□□□□ -1.56
LSM6YDR378C ERV46P39727 415 aa5.3□□□□□ -1.56
LSM6YDR378C SLZ1P40167 298 aa5.3□□□□□ -1.56
LSM6YDR378C SWP82P43554 623 aa5.3□□□□□ -1.56
LSM6YDR378C SIP4P46954 829 aa5.3□□□□□ -1.56
LSM6YDR378C IDP3P53982 420 aaKnown RBP5.3□□□□□ -1.56
LSM6YDR378C RSM28Q03430 361 aa5.3□□□□□ -1.56
LSM6YDR378C RIM13Q03792 727 aa5.3□□□□□ -1.56
LSM6YDR378C FRE7Q12333 620 aa5.3□□□□□ -1.56
LSM6YDR378C UBP13P38187 747 aa5.29□□□□□ -1.56
LSM6YDR378C ERG13P54839 491 aaKnown RBP5.29□□□□□ -1.56
LSM6YDR378C YLR049CQ12110 428 aa5.29□□□□□ -1.56
LSM6YDR378C YOR111WQ99210 232 aa5.29□□□□□ -1.56
LSM6YDR378C CDC16P09798 840 aa5.28□□□□□ -1.56
LSM6YDR378C YCR006CP25350 157 aa5.28□□□□□ -1.56
LSM6YDR378C LYS14P40971 790 aa5.28□□□□□ -1.56
LSM6YDR378C AAD10P47182 288 aa5.28□□□□□ -1.56
LSM6YDR378C YNR061CP53747 219 aa5.28□□□□□ -1.56
LSM6YDR378C PDR8Q06149 701 aa5.28□□□□□ -1.56
LSM6YDR378C ARN1P38731 627 aa5.27□□□□□ -1.57
LSM6YDR378C NOP16P40007 231 aaKnown RBP5.27□□□□□ -1.57
LSM6YDR378C FMP10P40098 244 aa5.27□□□□□ -1.57
LSM6YDR378C XBP1P40489 647 aa5.27□□□□□ -1.57
LSM6YDR378C PIL1P53252 339 aaKnown RBP5.27□□□□□ -1.57
LSM6YDR378C IST1P53843 298 aaPredicted RBP5.27□□□□□ -1.57
LSM6YDR378C RSC9Q03124 581 aa5.27□□□□□ -1.57
LSM6YDR378C SKG3Q06315 1026 aa5.27□□□□□ -1.57
LSM6YDR378C VIP1Q06685 1146 aaKnown RBP5.27□□□□□ -1.57
LSM6YDR378C ENT4Q07872 247 aa5.27□□□□□ -1.57
LSM6YDR378C HUA2Q12134 243 aa5.27□□□□□ -1.57
LSM6YDR378C HXK2P04807 486 aaKnown RBP5.26□□□□□ -1.57
LSM6YDR378C COQ3P27680 312 aa5.26□□□□□ -1.57
LSM6YDR378C PAH1P32567 862 aa5.26□□□□□ -1.57
LSM6YDR378C OCT1P35999 772 aa5.26□□□□□ -1.57
LSM6YDR378C ESL2P36168 1195 aa5.26□□□□□ -1.57
LSM6YDR378C YBL029WP38201 376 aa5.26□□□□□ -1.57
LSM6YDR378C ECM10P39987 644 aa5.26□□□□□ -1.57
LSM6YDR378C SEC24P40482 926 aaKnown RBP5.26□□□□□ -1.57
LSM6YDR378C CDC1P40986 491 aa5.26□□□□□ -1.57
LSM6YDR378C YJL107CP42947 387 aa5.26□□□□□ -1.57
LSM6YDR378C RPN11P43588 306 aaKnown RBP5.26□□□□□ -1.57
LSM6YDR378C RAD30Q04049 632 aa5.26□□□□□ -1.57
LSM6YDR378C MCH4Q08268 501 aa5.26□□□□□ -1.57
LSM6YDR378C GPN2Q08726 347 aaPredicted RBP5.26□□□□□ -1.57
LSM6YDR378C TCO89Q08921 799 aa5.26□□□□□ -1.57
LSM6YDR378C YMR085WP0CF18 432 aa5.25□□□□□ -1.57
LSM6YDR378C SAN1P22470 610 aa5.25□□□□□ -1.57
LSM6YDR378C RTS1P38903 757 aa5.25□□□□□ -1.57
LSM6YDR378C LTP1P40347 161 aa5.25□□□□□ -1.57
LSM6YDR378C ULP2P40537 1034 aaPredicted RBP5.25□□□□□ -1.57
LSM6YDR378C CTK2P46962 323 aa5.25□□□□□ -1.57
LSM6YDR378C INN1P53901 409 aa5.25□□□□□ -1.57
LSM6YDR378C PFA5Q03289 374 aa5.25□□□□□ -1.57
LSM6YDR378C GET3Q12154 354 aaKnown RBP5.25□□□□□ -1.57
LSM6YDR378C PET111P08468 800 aa5.24□□□□□ -1.57
LSM6YDR378C PTP1P25044 335 aa5.24□□□□□ -1.57
LSM6YDR378C UBP8P50102 471 aa5.24□□□□□ -1.57
LSM6YDR378C YSA1Q01976 231 aa5.24□□□□□ -1.57
LSM6YDR378C YLR455WQ06188 304 aa5.24□□□□□ -1.57
LSM6YDR378C PSR1Q07800 427 aa5.24□□□□□ -1.57
LSM6YDR378C RIX7Q07844 837 aaKnown RBP5.24□□□□□ -1.57
LSM6YDR378C RRI2Q12348 645 aa5.24□□□□□ -1.57
LSM6YDR378C YBR126W-AQ8TGU7 68 aa5.24□□□□□ -1.57
LSM6YDR378C SEM1O94742 89 aa5.23□□□□□ -1.57
LSM6YDR378C AAC3P18238 307 aa5.23□□□□□ -1.57
LSM6YDR378C TPA1P40032 644 aaKnown RBP5.23□□□□□ -1.57
LSM6YDR378C BUR6P40096 142 aa5.23□□□□□ -1.57
LSM6YDR378C PSA1P41940 361 aaKnown RBP5.23□□□□□ -1.57
LSM6YDR378C YGL036WP53185 909 aaPredicted RBP5.23□□□□□ -1.57
LSM6YDR378C INA17Q02888 182 aa5.23□□□□□ -1.57
LSM6YDR378C PFA4Q12006 378 aa5.23□□□□□ -1.57
LSM6YDR378C CRC1Q12289 327 aa5.23□□□□□ -1.57
LSM6YDR378C RPL19AP0CX82 189 aaKnown RBP5.22□□□□□ -1.57
LSM6YDR378C RPL19BP0CX83 189 aaPredicted RBP5.22□□□□□ -1.57
LSM6YDR378C NOP4P37838 685 aaKnown RBP5.22□□□□□ -1.57
LSM6YDR378C AGP2P38090 596 aa5.22□□□□□ -1.57
LSM6YDR378C MAL33P38157 468 aa5.22□□□□□ -1.57
LSM6YDR378C YNG2P38806 282 aaKnown RBP5.22□□□□□ -1.57
LSM6YDR378C JHD1P40034 492 aa5.22□□□□□ -1.57
LSM6YDR378C YFR020WP43600 232 aa5.22□□□□□ -1.57
LSM6YDR378C DPB11P47027 764 aaPredicted RBP5.22□□□□□ -1.57
LSM6YDR378C COP1P53622 1201 aaKnown RBP5.22□□□□□ -1.57
LSM6YDR378C PIG1Q06216 648 aa5.22□□□□□ -1.57
LSM6YDR378C RRI1Q12468 440 aa5.22□□□□□ -1.57
LSM6YDR378C YER145C-AA0A023PYF4 145 aa5.21□□□□□ -1.58
LSM6YDR378C GPA1P08539 472 aa5.21□□□□□ -1.58
LSM6YDR378C RAP1P11938 827 aa5.21□□□□□ -1.58
LSM6YDR378C YAP1P19880 650 aaKnown RBP5.21□□□□□ -1.58
LSM6YDR378C SPE2P21182 396 aa5.21□□□□□ -1.58
LSM6YDR378C VMA16P23968 213 aa5.21□□□□□ -1.58
LSM6YDR378C IMP2'P32351 346 aa5.21□□□□□ -1.58
LSM6YDR378C PDB1P32473 366 aaKnown RBP5.21□□□□□ -1.58
LSM6YDR378C RPN12P32496 274 aa5.21□□□□□ -1.58
LSM6YDR378C PKP1P40530 394 aa5.21□□□□□ -1.58
LSM6YDR378C CFD1P40558 293 aa5.21□□□□□ -1.58
LSM6YDR378C SMC3P47037 1230 aa5.21□□□□□ -1.58
LSM6YDR378C BNA3P47039 444 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms