RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W FRE5Q08908 694 aa4.32□□□□□ -1.72
HPR1YDR138W YBR255C-AQ3E776 120 aa4.32□□□□□ -1.72
HPR1YDR138W PWP1P21304 576 aaKnown RBP4.32□□□□□ -1.72
HPR1YDR138W WBP1P33767 430 aaKnown RBP4.32□□□□□ -1.72
HPR1YDR138W TIF3P34167 436 aaKnown RBP4.32□□□□□ -1.72
HPR1YDR138W PIM1P36775 1133 aa4.32□□□□□ -1.72
HPR1YDR138W RRF1P38771 230 aa4.32□□□□□ -1.72
HPR1YDR138W SEC28P40509 296 aaKnown RBP4.32□□□□□ -1.72
HPR1YDR138W YJL163CP46996 555 aa4.32□□□□□ -1.72
HPR1YDR138W YPL107WQ02873 248 aa4.32□□□□□ -1.72
HPR1YDR138W ROY1Q04847 553 aa4.32□□□□□ -1.72
HPR1YDR138W HEL2Q05580 639 aaKnown RBP4.32□□□□□ -1.72
HPR1YDR138W MRI1Q06489 411 aaKnown RBP4.32□□□□□ -1.72
HPR1YDR138W RTT109Q07794 436 aa4.32□□□□□ -1.72
HPR1YDR138W HSP42Q12329 375 aa4.32□□□□□ -1.72
HPR1YDR138W FRE6Q12473 712 aa4.32□□□□□ -1.72
HPR1YDR138W SYN8P31377 255 aa4.31□□□□□ -1.72
HPR1YDR138W MAM1P40065 302 aa4.31□□□□□ -1.72
HPR1YDR138W AMA1P50082 593 aa4.31□□□□□ -1.72
HPR1YDR138W PEX25Q02969 394 aa4.31□□□□□ -1.72
HPR1YDR138W GPM3Q12326 303 aa4.31□□□□□ -1.72
HPR1YDR138W YKL033W-AQ86ZR7 236 aa4.31□□□□□ -1.72
HPR1YDR138W YRF1-4O13559 1382 aa4.31□□□□□ -1.72
HPR1YDR138W PET111P08468 800 aa4.3□□□□□ -1.72
HPR1YDR138W STE4P18851 423 aa4.3□□□□□ -1.72
HPR1YDR138W YCR051WP25631 222 aa4.3□□□□□ -1.72
HPR1YDR138W PMT1P33775 817 aa4.3□□□□□ -1.72
HPR1YDR138W REG2P38232 338 aa4.3□□□□□ -1.72
HPR1YDR138W VID24P38263 362 aa4.3□□□□□ -1.72
HPR1YDR138W ELO3P40319 345 aa4.3□□□□□ -1.72
HPR1YDR138W YIL161WP40449 235 aaKnown RBP4.3□□□□□ -1.72
HPR1YDR138W ART5P53244 586 aaKnown RBP4.3□□□□□ -1.72
HPR1YDR138W GYL1Q04322 720 aa4.3□□□□□ -1.72
HPR1YDR138W YDL242WQ07746 117 aa4.3□□□□□ -1.72
HPR1YDR138W RIM20Q12033 661 aa4.3□□□□□ -1.72
HPR1YDR138W ERG27Q12452 347 aaKnown RBP4.3□□□□□ -1.72
HPR1YDR138W FUB1P25659 250 aa4.3□□□□□ -1.72
HPR1YDR138W BUD14P27637 709 aa4.3□□□□□ -1.72
HPR1YDR138W GCD7P32502 381 aaPredicted RBP4.3□□□□□ -1.72
HPR1YDR138W YKL100CP34248 587 aa4.3□□□□□ -1.72
HPR1YDR138W UBP11P36026 717 aa4.3□□□□□ -1.72
HPR1YDR138W SKP2P42843 763 aa4.3□□□□□ -1.72
HPR1YDR138W MSY1P48527 492 aa4.3□□□□□ -1.72
HPR1YDR138W BUD17P53727 317 aa4.3□□□□□ -1.72
HPR1YDR138W YNL058CP53947 316 aa4.3□□□□□ -1.72
HPR1YDR138W CIK1Q01649 594 aa4.3□□□□□ -1.72
HPR1YDR138W ENB1Q08299 606 aa4.3□□□□□ -1.72
HPR1YDR138W SPE3Q12074 293 aaKnown RBP4.3□□□□□ -1.72
HPR1YDR138W COX1P00401 534 aa4.29□□□□□ -1.72
HPR1YDR138W RPP2AP05319 106 aaKnown RBP4.29□□□□□ -1.72
HPR1YDR138W DFR1P07807 211 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
HPR1YDR138W EST1P17214 699 aaPredicted RBP4.29□□□□□ -1.72
HPR1YDR138W PUP2P32379 260 aa4.29□□□□□ -1.72
HPR1YDR138W HEL1P36113 551 aa4.29□□□□□ -1.72
HPR1YDR138W ERC1P38767 581 aa4.29□□□□□ -1.72
HPR1YDR138W POP2P39008 433 aa4.29□□□□□ -1.72
HPR1YDR138W AIM20P40451 204 aa4.29□□□□□ -1.72
HPR1YDR138W DIP5P53388 608 aa4.29□□□□□ -1.72
HPR1YDR138W VPS9P54787 451 aa4.29□□□□□ -1.72
HPR1YDR138W SOV1Q04748 898 aa4.29□□□□□ -1.72
HPR1YDR138W USV1Q12132 391 aa4.29□□□□□ -1.72
HPR1YDR138W AI5_ALPHAQ9ZZX1 630 aa4.29□□□□□ -1.72
HPR1YDR138W GAL80P04387 435 aa4.29□□□□□ -1.72
HPR1YDR138W RPS13P05756 151 aaKnown RBP4.29□□□□□ -1.72
HPR1YDR138W PRE8P23639 250 aa4.29□□□□□ -1.72
HPR1YDR138W FET5P43561 622 aa4.29□□□□□ -1.72
HPR1YDR138W NMA2P53204 395 aa4.29□□□□□ -1.72
HPR1YDR138W PRP3Q03338 469 aaPredicted RBP4.29□□□□□ -1.72
HPR1YDR138W RSF1Q05043 376 aa4.29□□□□□ -1.72
HPR1YDR138W CRN1Q06440 651 aa4.29□□□□□ -1.72
HPR1YDR138W ATG23Q06671 453 aa4.29□□□□□ -1.72
HPR1YDR138W REX3Q12090 404 aa4.29□□□□□ -1.72
HPR1YDR138W RLM1Q12224 676 aa4.29□□□□□ -1.72
HPR1YDR138W YER175W-AQ8TGU4 54 aa4.29□□□□□ -1.72
HPR1YDR138W CNE1P27825 502 aa4.28□□□□□ -1.72
HPR1YDR138W PDB1P32473 366 aaKnown RBP4.28□□□□□ -1.72
HPR1YDR138W TCD2P36101 447 aaKnown RBP4.28□□□□□ -1.72
HPR1YDR138W GND1P38720 489 aaKnown RBP4.28□□□□□ -1.72
HPR1YDR138W PET130P47065 347 aa4.28□□□□□ -1.72
HPR1YDR138W SPT20P50875 604 aa4.28□□□□□ -1.72
HPR1YDR138W YIP4P53093 235 aa4.28□□□□□ -1.72
HPR1YDR138W UBP16Q02863 499 aa4.28□□□□□ -1.72
HPR1YDR138W VPS38Q05919 439 aa4.28□□□□□ -1.72
HPR1YDR138W RRP9Q06506 573 aaKnown RBP4.28□□□□□ -1.72
HPR1YDR138W LUC7Q07508 261 aaPredicted RBP4.28□□□□□ -1.72
HPR1YDR138W CDC45Q08032 650 aa4.28□□□□□ -1.72
HPR1YDR138W TCO89Q08921 799 aa4.28□□□□□ -1.72
HPR1YDR138W ATG9Q12142 997 aa4.28□□□□□ -1.72
HPR1YDR138W DFG16Q99234 619 aa4.28□□□□□ -1.72
HPR1YDR138W CHD1P32657 1468 aa4.28□□□□□ -1.72
HPR1YDR138W GLT1Q12680 2145 aaKnown RBP4.28□□□□□ -1.72
HPR1YDR138W YBR085C-AO43137 85 aa4.28□□□□□ -1.72
HPR1YDR138W YPK1P12688 680 aaKnown RBP4.28□□□□□ -1.72
HPR1YDR138W KGD2P19262 463 aaPredicted RBP4.28□□□□□ -1.72
HPR1YDR138W MGM1P32266 881 aa4.28□□□□□ -1.72
HPR1YDR138W PUB1P32588 453 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
HPR1YDR138W SEC66P33754 206 aa4.28□□□□□ -1.72
HPR1YDR138W GDI1P39958 451 aaKnown RBP4.28□□□□□ -1.72
HPR1YDR138W SSU1P41930 458 aa4.28□□□□□ -1.72
HPR1YDR138W YAT1P80235 687 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms