RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	SWT1	Q12104	458 aa		4.58	□□□□□ -1.68
TRM1	YDR120C	SEC3	P33332	1336 aa	Known RBP	4.58	□□□□□ -1.68
TRM1	YDR120C	FUN12	P39730	1002 aa	Known RBP	4.58	□□□□□ -1.68
TRM1	YDR120C	SAP1	P39955	897 aa	Known RBP	4.58	□□□□□ -1.68
TRM1	YDR120C	YPL191C	Q08930	360 aa		4.58	□□□□□ -1.68
TRM1	YDR120C	ENT1	Q12518	454 aa		4.58	□□□□□ -1.68
TRM1	YDR120C	YLR302C	O13544	120 aa		4.57	□□□□□ -1.68
TRM1	YDR120C	COX1	P00401	534 aa		4.57	□□□□□ -1.68
TRM1	YDR120C	GFD2	P25370	566 aa	Known RBP	4.57	□□□□□ -1.68
TRM1	YDR120C	HES1	P35843	434 aa		4.57	□□□□□ -1.68
TRM1	YDR120C	VBA2	P38358	474 aa	Known RBP	4.57	□□□□□ -1.68
TRM1	YDR120C	AI5_ALPHA	Q9ZZX1	630 aa		4.57	□□□□□ -1.68
TRM1	YDR120C	FUM1	P08417	488 aa	Known RBP	4.56	□□□□□ -1.68
TRM1	YDR120C	HEM1	P09950	548 aa	Predicted RBP	4.56	□□□□□ -1.68
TRM1	YDR120C	PSD1	P39006	500 aa		4.56	□□□□□ -1.68
TRM1	YDR120C	DJP1	P40564	432 aa		4.56	□□□□□ -1.68
TRM1	YDR120C	VPS4	P52917	437 aa		4.56	□□□□□ -1.68
TRM1	YDR120C	REG1	Q00816	1014 aa		4.56	□□□□□ -1.68
TRM1	YDR120C	BAG7	Q12128	409 aa		4.56	□□□□□ -1.68
TRM1	YDR120C	VCX1	Q99385	411 aa		4.56	□□□□□ -1.68
TRM1	YDR120C	SES1	P07284	462 aa	Known RBP	4.55	□□□□□ -1.68
TRM1	YDR120C	RPB2	P08518	1224 aa	Known RBP	4.55	□□□□□ -1.68
TRM1	YDR120C	ERG8	P24521	451 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	RFA2	P26754	273 aa	Known RBP	4.55	□□□□□ -1.68
TRM1	YDR120C	MRP20	P32387	263 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	RPC34	P32910	317 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	KES1	P35844	434 aa	Known RBP	4.55	□□□□□ -1.68
TRM1	YDR120C	MUD2	P36084	527 aa	Known RBP	4.55	□□□□□ -1.68
TRM1	YDR120C	MSY1	P48527	492 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	RCO1	Q04779	684 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	IMH1	Q06704	911 aa	Known RBP	4.55	□□□□□ -1.68
TRM1	YDR120C	CYK3	Q07533	885 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	RRI2	Q12348	645 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	GCN2	P15442	1659 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	AQY1	P0CD91	305 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	LAC1	P28496	418 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	SIP4	P46954	829 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	UBX6	P47049	396 aa		4.55	□□□□□ -1.68
TRM1	YDR120C	ERG27	Q12452	347 aa	Known RBP	4.55	□□□□□ -1.68
TRM1	YDR120C	YSP3	P25036	478 aa		4.54	□□□□□ -1.68
TRM1	YDR120C	FMP10	P40098	244 aa		4.54	□□□□□ -1.68
TRM1	YDR120C	TMA108	P40462	946 aa		4.54	□□□□□ -1.68
TRM1	YDR120C	CIR1	P42940	261 aa		4.54	□□□□□ -1.68
TRM1	YDR120C	SAE2	P46946	345 aa		4.54	□□□□□ -1.68
TRM1	YDR120C	YAT1	P80235	687 aa		4.54	□□□□□ -1.68
TRM1	YDR120C	AAT1	Q01802	451 aa		4.54	□□□□□ -1.68
TRM1	YDR120C	FMP30	Q02883	468 aa		4.54	□□□□□ -1.68
TRM1	YDR120C	YDR109C	Q04585	715 aa		4.54	□□□□□ -1.68
TRM1	YDR120C	ARO10	Q06408	635 aa		4.54	□□□□□ -1.68
TRM1	YDR120C	IKI3	Q06706	1349 aa	Known RBP	4.54	□□□□□ -1.68
TRM1	YDR120C	PAH1	P32567	862 aa		4.53	□□□□□ -1.68
TRM1	YDR120C	PPZ2	P33329	710 aa		4.53	□□□□□ -1.68
TRM1	YDR120C	YJR061W	P40355	935 aa		4.53	□□□□□ -1.68
TRM1	YDR120C	PFK26	P40433	827 aa	Known RBP	4.53	□□□□□ -1.68
TRM1	YDR120C	YJL043W	P47053	257 aa		4.53	□□□□□ -1.68
TRM1	YDR120C	YNR061C	P53747	219 aa		4.53	□□□□□ -1.68
TRM1	YDR120C	COG4	Q06096	861 aa		4.53	□□□□□ -1.68
TRM1	YDR120C	RAD34	Q06665	692 aa		4.53	□□□□□ -1.68
TRM1	YDR120C	PSK2	Q08217	1101 aa		4.53	□□□□□ -1.68
TRM1	YDR120C	NBP2	Q12163	236 aa		4.53	□□□□□ -1.68
TRM1	YDR120C	RTC1	Q08281	1341 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	GSY2	P27472	705 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	YEL068C	P39977	110 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	UBP7	P40453	1071 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	BSC5	P53755	489 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	SLK19	Q08581	821 aa	Known RBP	4.52	□□□□□ -1.69
TRM1	YDR120C	NUS1	Q12063	375 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.52	□□□□□ -1.69
TRM1	YDR120C	CDC16	P09798	840 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	PCT1	P13259	424 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	SAN1	P22470	610 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	ILV6	P25605	309 aa	Known RBP	4.52	□□□□□ -1.69
TRM1	YDR120C	IMP2'	P32351	346 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	SRB5	P32585	307 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	TFC3	P34111	1160 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	FLO10	P36170	1169 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	RIX1	P38883	763 aa	Predicted RBP	4.52	□□□□□ -1.69
TRM1	YDR120C	NOP16	P40007	231 aa	Known RBP	4.52	□□□□□ -1.69
TRM1	YDR120C	PHM8	P40025	321 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	UPF3	P48412	387 aa	Known RBP	4.52	□□□□□ -1.69
TRM1	YDR120C	YRB30	P53107	440 aa	Predicted RBP	4.52	□□□□□ -1.69
TRM1	YDR120C	ADE16	P54113	591 aa	Known RBP	4.52	□□□□□ -1.69
TRM1	YDR120C	YKU80	Q04437	629 aa		4.52	□□□□□ -1.69
TRM1	YDR120C	NUP192	P47054	1683 aa		4.51	□□□□□ -1.69
TRM1	YDR120C	PTC6	P25646	442 aa		4.51	□□□□□ -1.69
TRM1	YDR120C	GSH1	P32477	678 aa		4.51	□□□□□ -1.69
TRM1	YDR120C	ERP2	P39704	215 aa		4.51	□□□□□ -1.69
TRM1	YDR120C	ARC1	P46672	376 aa	Known RBP	4.51	□□□□□ -1.69
TRM1	YDR120C	YNL058C	P53947	316 aa		4.51	□□□□□ -1.69
TRM1	YDR120C	SPN1	Q06505	410 aa	Predicted RBP	4.51	□□□□□ -1.69
TRM1	YDR120C	SWA2	Q06677	668 aa		4.51	□□□□□ -1.69
TRM1	YDR120C	YRF1-2	P40105	1681 aa		4.51	□□□□□ -1.69
TRM1	YDR120C	RAV1	P47104	1357 aa		4.5	□□□□□ -1.69
TRM1	YDR120C	RAD9	P14737	1309 aa		4.5	□□□□□ -1.69
TRM1	YDR120C	ILV2	P07342	687 aa	Known RBP	4.5	□□□□□ -1.69
TRM1	YDR120C	TUB1	P09733	447 aa	Known RBP	4.5	□□□□□ -1.69
TRM1	YDR120C	HSC82	P15108	705 aa	Known RBP	4.5	□□□□□ -1.69
TRM1	YDR120C	AAC3	P18238	307 aa		4.5	□□□□□ -1.69
TRM1	YDR120C	TAX4	P47030	604 aa		4.5	□□□□□ -1.69
TRM1	YDR120C	DCP2	P53550	970 aa	Known RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms