RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	LRS4	Q04087	347 aa	Known RBP	3.81	□□□□□ -1.8
RPO21	YDL140C	GRX8	Q05926	109 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	UTP21	Q06078	939 aa	Predicted RBP	3.81	□□□□□ -1.8
RPO21	YDL140C	GIC2	Q06648	383 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	HNT3	Q08702	217 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	AIR2	Q12476	344 aa	Known RBP	3.81	□□□□□ -1.8
RPO21	YDL140C	YOR019W	Q99248	730 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	YPT1	P01123	206 aa	Known RBP	3.81	□□□□□ -1.8
RPO21	YDL140C	STE7	P06784	515 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	TEC1	P18412	486 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	HCS1	P34243	683 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	TCD1	P38756	429 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	PAC1	P39946	494 aa	Known RBP	3.81	□□□□□ -1.8
RPO21	YDL140C	BUD8	P41698	603 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	RPA34	P47006	233 aa	Predicted RBP	3.81	□□□□□ -1.8
RPO21	YDL140C	YGR035C	P53222	116 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	NOG2	P53742	486 aa	Known RBP	3.81	□□□□□ -1.8
RPO21	YDL140C	PEX13	P80667	386 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	FMP45	Q07651	309 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	YTM1	Q12024	460 aa	Predicted RBP	3.81	□□□□□ -1.8
RPO21	YDL140C	TY4A-H	Q6Q5P6	413 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	ASP3-2	P0CX77	362 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	ASP3-3	P0CX78	362 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	ASP3-4	P0CX79	362 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	ASP3-1	P0CZ17	362 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	GLN4	P13188	809 aa	Known RBP	3.81	□□□□□ -1.8
RPO21	YDL140C	PHO81	P17442	1178 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	FRE1	P32791	686 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	YSC83	P32792	385 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	CCT4	P39078	528 aa	Known RBP	3.81	□□□□□ -1.8
RPO21	YDL140C	YIR016W	P40572	265 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	NBP1	P52919	319 aa	Predicted RBP	3.81	□□□□□ -1.8
RPO21	YDL140C	GUP1	P53154	560 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	YGR127W	P53275	312 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	CAF120	P53836	1060 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	RSM10	Q03201	203 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	DON1	Q05610	365 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	PUN1	Q06991	263 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	AIM6	Q07716	390 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	YDR018C	Q12185	396 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	NKP1	Q12493	238 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	PRM4	Q12498	284 aa		3.81	□□□□□ -1.8
RPO21	YDL140C	YDJ1	P25491	409 aa	Known RBP	3.8	□□□□□ -1.8
RPO21	YDL140C	PXL1	P36166	706 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	EFM1	P38732	585 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	AVT2	P39981	480 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	AXL1	P40851	1208 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	YIP1	P53039	248 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	TUB4	P53378	473 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
RPO21	YDL140C	YHM2	Q04013	314 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	BER1	Q06688	274 aa	Known RBP	3.8	□□□□□ -1.8
RPO21	YDL140C	YOR114W	Q12219	294 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	SFM1	Q12314	213 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	SCEI	P03882	235 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	NCP1	P16603	691 aa	Known RBP	3.8	□□□□□ -1.8
RPO21	YDL140C	BMH1	P29311	267 aa	Known RBP	3.8	□□□□□ -1.8
RPO21	YDL140C	MOT2	P34909	587 aa	Known RBP	3.8	□□□□□ -1.8
RPO21	YDL140C	YHL008C	P38750	627 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	PAN5	P38787	379 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	FHL1	P39521	936 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	YEL023C	P39992	682 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
RPO21	YDL140C	YGR168C	P53293	376 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	SSQ1	Q05931	657 aa	Predicted RBP	3.8	□□□□□ -1.8
RPO21	YDL140C	ECM7	Q06200	448 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	HDA2	Q06629	674 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	PPR1	P07272	904 aa	Predicted RBP	3.8	□□□□□ -1.8
RPO21	YDL140C	PUT3	P25502	979 aa	Predicted RBP	3.8	□□□□□ -1.8
RPO21	YDL140C	RAD16	P31244	790 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	ACP1	P32463	125 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	NPL6	P32832	435 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	UBX7	P38349	436 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	YHR182W	P38870	785 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	SOK1	P40317	901 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	RRP46	P53256	223 aa	Predicted RBP	3.8	□□□□□ -1.8
RPO21	YDL140C	SIW14	P53965	281 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	YPL071C	Q02864	156 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	GTB1	Q04924	702 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	RIP-Chip
RPO21	YDL140C	EPT1	P22140	391 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	YSP3	P25036	478 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	FUI1	P38196	639 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	ALG8	P40351	577 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	YJL068C	P40363	299 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	RSC1	P53236	928 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	BUD22	Q04347	519 aa	Known RBP	3.8	□□□□□ -1.8
RPO21	YDL140C	RTN1	Q04947	295 aa	Known RBP	3.8	□□□□□ -1.8
RPO21	YDL140C	CRN1	Q06440	651 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	FDH1	Q08911	376 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	VAM3	Q12241	283 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	SPE4	Q12455	300 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	AI5_BETA	Q9ZZX0	354 aa		3.8	□□□□□ -1.8
RPO21	YDL140C	GMH1	P36125	273 aa		3.79	□□□□□ -1.8
RPO21	YDL140C	SHM1	P37292	490 aa	Predicted RBP	3.79	□□□□□ -1.8
RPO21	YDL140C	PRY3	P47033	881 aa		3.79	□□□□□ -1.8
RPO21	YDL140C	ELP4	Q02884	456 aa	Known RBP	3.79	□□□□□ -1.8
RPO21	YDL140C	UME1	Q03010	460 aa		3.79	□□□□□ -1.8
RPO21	YDL140C	YDR541C	Q03049	344 aa		3.79	□□□□□ -1.8
RPO21	YDL140C	RRP12	Q12754	1228 aa	Known RBP	3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms