RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C TYE7P33122 291 aaPredicted RBP5.27□□□□□ -1.57
SCM3YDL139C BYE1P36106 594 aa5.27□□□□□ -1.57
SCM3YDL139C YDR089WP38966 869 aa5.27□□□□□ -1.57
SCM3YDL139C OAF1P39720 1047 aaPredicted RBP5.27□□□□□ -1.57
SCM3YDL139C AIM21P40563 679 aa5.27□□□□□ -1.57
SCM3YDL139C LAM5P43560 674 aa5.27□□□□□ -1.57
SCM3YDL139C RPC17P47076 161 aa5.27□□□□□ -1.57
SCM3YDL139C TAH11P47112 604 aa5.27□□□□□ -1.57
SCM3YDL139C PMT3P47190 753 aa5.27□□□□□ -1.57
SCM3YDL139C GCV2P49095 1034 aa5.27□□□□□ -1.57
SCM3YDL139C GPG1P53130 126 aa5.27□□□□□ -1.57
SCM3YDL139C GND2P53319 492 aa5.27□□□□□ -1.57
SCM3YDL139C UTP6Q02354 440 aaKnown RBP5.27□□□□□ -1.57
SCM3YDL139C PNG1Q02890 363 aa5.27□□□□□ -1.57
SCM3YDL139C MTG1Q03151 367 aaPredicted RBP5.27□□□□□ -1.57
SCM3YDL139C YMR102CQ03177 834 aa5.27□□□□□ -1.57
SCM3YDL139C CLU1Q03690 1277 aaKnown RBP5.27□□□□□ -1.57
SCM3YDL139C ARO80Q04052 950 aa5.27□□□□□ -1.57
SCM3YDL139C BUD22Q04347 519 aaKnown RBP5.27□□□□□ -1.57
SCM3YDL139C YDR018CQ12185 396 aa5.27□□□□□ -1.57
SCM3YDL139C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
SCM3YDL139C ZRT2Q12436 422 aa5.27□□□□□ -1.57
SCM3YDL139C YBR182C-AQ8TGU6 64 aa5.27□□□□□ -1.57
SCM3YDL139C SNF1P06782 633 aaKnown RBP5.26□□□□□ -1.57
SCM3YDL139C SPE1P08432 466 aa5.26□□□□□ -1.57
SCM3YDL139C YML002WP0CF17 737 aa5.26□□□□□ -1.57
SCM3YDL139C CDC24P11433 854 aaPredicted RBP5.26□□□□□ -1.57
SCM3YDL139C HMG1P12683 1054 aa5.26□□□□□ -1.57
SCM3YDL139C PEP5P12868 1029 aa5.26□□□□□ -1.57
SCM3YDL139C MIH1P23748 554 aa5.26□□□□□ -1.57
SCM3YDL139C RSA4P25382 515 aaKnown RBP5.26□□□□□ -1.57
SCM3YDL139C SEC21P32074 935 aaKnown RBP5.26□□□□□ -1.57
SCM3YDL139C HOG1P32485 435 aa5.26□□□□□ -1.57
SCM3YDL139C TRM2P33753 639 aa5.26□□□□□ -1.57
SCM3YDL139C UIP5P36137 443 aa5.26□□□□□ -1.57
SCM3YDL139C YBR032WP38223 100 aa5.26□□□□□ -1.57
SCM3YDL139C HSL7P38274 827 aa5.26□□□□□ -1.57
SCM3YDL139C TIF5P38431 405 aaKnown RBP5.26□□□□□ -1.57
SCM3YDL139C PCM1P38628 557 aaKnown RBP5.26□□□□□ -1.57
SCM3YDL139C YHL026CP38740 315 aa5.26□□□□□ -1.57
SCM3YDL139C YMR134WP40207 237 aa5.26□□□□□ -1.57
SCM3YDL139C YIL108WP40483 696 aaKnown RBP5.26□□□□□ -1.57
SCM3YDL139C RLP7P40693 322 aaKnown RBP5.26□□□□□ -1.57
SCM3YDL139C SNZ3P43545 298 aa5.26□□□□□ -1.57
SCM3YDL139C COS5P47187 383 aa5.26□□□□□ -1.57
SCM3YDL139C AIM14P53109 570 aa5.26□□□□□ -1.57
SCM3YDL139C MDR1P53258 950 aa5.26□□□□□ -1.57
SCM3YDL139C SPC98P53540 846 aa5.26□□□□□ -1.57
SCM3YDL139C SNZ2P53824 298 aa5.26□□□□□ -1.57
SCM3YDL139C JJJ1P53863 590 aa5.26□□□□□ -1.57
SCM3YDL139C FMP30Q02883 468 aa5.26□□□□□ -1.57
SCM3YDL139C CWC21Q03375 135 aaKnown RBP5.26□□□□□ -1.57
SCM3YDL139C ATG16Q03818 150 aa5.26□□□□□ -1.57
SCM3YDL139C YDR338CQ05497 695 aa5.26□□□□□ -1.57
SCM3YDL139C ATG33Q06485 197 aa5.26□□□□□ -1.57
SCM3YDL139C TSR1Q07381 788 aaKnown RBP5.26□□□□□ -1.57
SCM3YDL139C SLD7Q08457 257 aa5.26□□□□□ -1.57
SCM3YDL139C FAP7Q12055 197 aaPredicted RBP5.26□□□□□ -1.57
SCM3YDL139C RTP1Q12751 981 aa5.26□□□□□ -1.57
SCM3YDL139C CMD1P06787 147 aaKnown RBP5.25□□□□□ -1.57
SCM3YDL139C MGT1P26188 188 aa5.25□□□□□ -1.57
SCM3YDL139C EFB1P32471 206 aaKnown RBP5.25□□□□□ -1.57
SCM3YDL139C CNS1P33313 385 aa5.25□□□□□ -1.57
SCM3YDL139C SRB2P34162 210 aa5.25□□□□□ -1.57
SCM3YDL139C OAF3P36023 863 aa5.25□□□□□ -1.57
SCM3YDL139C SHM2P37291 469 aaKnown RBP5.25□□□□□ -1.57
SCM3YDL139C DSE1P40077 573 aa5.25□□□□□ -1.57
SCM3YDL139C PFK26P40433 827 aaKnown RBP5.25□□□□□ -1.57
SCM3YDL139C YIL054WP40524 105 aa5.25□□□□□ -1.57
SCM3YDL139C SAP185P40856 1058 aa5.25□□□□□ -1.57
SCM3YDL139C POL31P46957 487 aa5.25□□□□□ -1.57
SCM3YDL139C MND1P53102 219 aa5.25□□□□□ -1.57
SCM3YDL139C VPS62P53285 467 aa5.25□□□□□ -1.57
SCM3YDL139C YNL040WP53960 456 aaPredicted RBP5.25□□□□□ -1.57
SCM3YDL139C UBX4P54730 416 aa5.25□□□□□ -1.57
SCM3YDL139C MZM1Q03429 123 aaPredicted RBP5.25□□□□□ -1.57
SCM3YDL139C IVY1Q04934 453 aa5.25□□□□□ -1.57
SCM3YDL139C KAP95Q06142 861 aaKnown RBP5.25□□□□□ -1.57
SCM3YDL139C TPO1Q07824 586 aa5.25□□□□□ -1.57
SCM3YDL139C GPB1Q08886 897 aa5.25□□□□□ -1.57
SCM3YDL139C HAL9Q12180 1030 aa5.25□□□□□ -1.57
SCM3YDL139C HIF1Q12373 385 aa5.25□□□□□ -1.57
SCM3YDL139C PCD1Q12524 340 aa5.25□□□□□ -1.57
SCM3YDL139C DIF1O13577 133 aa5.24□□□□□ -1.57
SCM3YDL139C PRC1P00729 532 aa5.24□□□□□ -1.57
SCM3YDL139C PAB1P04147 577 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
SCM3YDL139C NAT1P12945 854 aaKnown RBP5.24□□□□□ -1.57
SCM3YDL139C CTS1P29029 562 aa5.24□□□□□ -1.57
SCM3YDL139C MEI4P29467 408 aa5.24□□□□□ -1.57
SCM3YDL139C SEC1P30619 724 aaKnown RBP5.24□□□□□ -1.57
SCM3YDL139C RRP1P35178 278 aaPredicted RBP5.24□□□□□ -1.57
SCM3YDL139C MPT5P39016 859 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
SCM3YDL139C TMA108P40462 946 aa5.24□□□□□ -1.57
SCM3YDL139C SHR5P41912 237 aa5.24□□□□□ -1.57
SCM3YDL139C YFL040WP43562 540 aa5.24□□□□□ -1.57
SCM3YDL139C ZIP2P53061 704 aa5.24□□□□□ -1.57
SCM3YDL139C STP1Q00947 519 aa5.24□□□□□ -1.57
SCM3YDL139C MRS2Q01926 470 aa5.24□□□□□ -1.57
SCM3YDL139C SND1Q04007 877 aa5.24□□□□□ -1.57
SCM3YDL139C NHX1Q04121 633 aa5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms