RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W GGA2P38817 585 aaKnown RBP7.89□□□□□ -1.15
NDE2YDL085W XDJ1P39102 459 aa7.89□□□□□ -1.15
NDE2YDL085W ELO3P40319 345 aa7.89□□□□□ -1.15
NDE2YDL085W DLD2P46681 530 aaKnown RBP7.89□□□□□ -1.15
NDE2YDL085W BFA1P47113 574 aa7.89□□□□□ -1.15
NDE2YDL085W YGR035CP53222 116 aa7.89□□□□□ -1.15
NDE2YDL085W NRD1P53617 575 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
NDE2YDL085W NHP10Q03435 203 aa7.89□□□□□ -1.15
NDE2YDL085W SWC7Q06707 132 aa7.89□□□□□ -1.15
NDE2YDL085W LDB18Q07887 179 aa7.89□□□□□ -1.15
NDE2YDL085W PGC1Q08959 321 aa7.89□□□□□ -1.15
NDE2YDL085W MSH5Q12175 901 aa7.89□□□□□ -1.15
NDE2YDL085W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
NDE2YDL085W AFI1Q99222 893 aa7.89□□□□□ -1.15
NDE2YDL085W UBR2Q07963 1872 aa7.88□□□□□ -1.15
NDE2YDL085W ATP1P07251 545 aaKnown RBP7.88□□□□□ -1.15
NDE2YDL085W AEP1P32493 518 aa7.88□□□□□ -1.15
NDE2YDL085W GDA1P32621 518 aa7.88□□□□□ -1.15
NDE2YDL085W SEC66P33754 206 aa7.88□□□□□ -1.15
NDE2YDL085W TOM20P35180 183 aa7.88□□□□□ -1.15
NDE2YDL085W ARN1P38731 627 aa7.88□□□□□ -1.15
NDE2YDL085W CNN1P43618 361 aa7.88□□□□□ -1.15
NDE2YDL085W NCS6P53088 359 aa7.88□□□□□ -1.15
NDE2YDL085W ASI2P53895 289 aa7.88□□□□□ -1.15
NDE2YDL085W YMR155WQ03795 547 aa7.88□□□□□ -1.15
NDE2YDL085W FAR10Q06001 478 aa7.88□□□□□ -1.15
NDE2YDL085W ENT4Q07872 247 aa7.88□□□□□ -1.15
NDE2YDL085W YOR389WQ08912 624 aa7.88□□□□□ -1.15
NDE2YDL085W STE2D6VTK4 431 aa7.87□□□□□ -1.15
NDE2YDL085W MST1P07236 462 aa7.87□□□□□ -1.15
NDE2YDL085W RPB4P20433 221 aaPredicted RBP7.87□□□□□ -1.15
NDE2YDL085W TRX2P22803 104 aaKnown RBP7.87□□□□□ -1.15
NDE2YDL085W CNA1P23287 553 aa7.87□□□□□ -1.15
NDE2YDL085W ATP7P30902 174 aa7.87□□□□□ -1.15
NDE2YDL085W CCR4P31384 837 aaKnown RBP7.87□□□□□ -1.15
NDE2YDL085W ADD66P36040 267 aa7.87□□□□□ -1.15
NDE2YDL085W YBR284WP38150 797 aa7.87□□□□□ -1.15
NDE2YDL085W RIM4P38741 713 aa7.87□□□□□ -1.15
NDE2YDL085W NPT1P39683 429 aaKnown RBP7.87□□□□□ -1.15
NDE2YDL085W NUP60P39705 539 aa7.87□□□□□ -1.15
NDE2YDL085W AFG3P39925 761 aa7.87□□□□□ -1.15
NDE2YDL085W HAT2P39984 401 aa7.87□□□□□ -1.15
NDE2YDL085W AIM20P40451 204 aa7.87□□□□□ -1.15
NDE2YDL085W UBP7P40453 1071 aa7.87□□□□□ -1.15
NDE2YDL085W HPM1P40481 377 aa7.87□□□□□ -1.15
NDE2YDL085W NOP19P53317 196 aaPredicted RBP7.87□□□□□ -1.15
NDE2YDL085W CEG1Q01159 459 aaPredicted RBP7.87□□□□□ -1.15
NDE2YDL085W PET117Q02771 107 aa7.87□□□□□ -1.15
NDE2YDL085W TRS31Q03337 283 aa7.87□□□□□ -1.15
NDE2YDL085W YDR179W-AQ03983 463 aa7.87□□□□□ -1.15
NDE2YDL085W DYN3Q04949 312 aa7.87□□□□□ -1.15
NDE2YDL085W BUD20Q08004 166 aaPredicted RBP7.87□□□□□ -1.15
NDE2YDL085W YOL019WQ08157 551 aa7.87□□□□□ -1.15
NDE2YDL085W SLD7Q08457 257 aa7.87□□□□□ -1.15
NDE2YDL085W LEA1Q08963 238 aaPredicted RBP7.87□□□□□ -1.15
NDE2YDL085W PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
NDE2YDL085W HEM2P05373 342 aa7.86□□□□□ -1.15
NDE2YDL085W SUI3P09064 285 aaKnown RBP7.86□□□□□ -1.15
NDE2YDL085W HSP26P15992 214 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
NDE2YDL085W YCR090CP25654 182 aaKnown RBP7.86□□□□□ -1.15
NDE2YDL085W TIF3P34167 436 aaKnown RBP7.86□□□□□ -1.15
NDE2YDL085W ASK1P35734 292 aa7.86□□□□□ -1.15
NDE2YDL085W SPC42P36094 363 aa7.86□□□□□ -1.15
NDE2YDL085W UTP9P38882 575 aaKnown RBP7.86□□□□□ -1.15
NDE2YDL085W IST3P40565 148 aaPredicted RBP7.86□□□□□ -1.15
NDE2YDL085W SHE4P51534 789 aa7.86□□□□□ -1.15
NDE2YDL085W ARC35P53731 342 aaKnown RBP7.86□□□□□ -1.15
NDE2YDL085W NAN1Q02931 896 aaKnown RBP7.86□□□□□ -1.15
NDE2YDL085W CSN9Q03981 162 aa7.86□□□□□ -1.15
NDE2YDL085W YML083CQ04526 418 aa7.86□□□□□ -1.15
NDE2YDL085W YMR226CQ05016 267 aaKnown RBP7.86□□□□□ -1.15
NDE2YDL085W GGA1Q06336 557 aa7.86□□□□□ -1.15
NDE2YDL085W HDA3Q06623 655 aa7.86□□□□□ -1.15
NDE2YDL085W PSR1Q07800 427 aa7.86□□□□□ -1.15
NDE2YDL085W APM4Q99186 491 aa7.86□□□□□ -1.15
NDE2YDL085W ERG20P08524 352 aaKnown RBP7.85□□□□□ -1.15
NDE2YDL085W CLB3P24870 427 aa7.85□□□□□ -1.15
NDE2YDL085W SLX1P38324 304 aa7.85□□□□□ -1.15
NDE2YDL085W SEO1P39709 593 aa7.85□□□□□ -1.15
NDE2YDL085W MGS1P40151 587 aa7.85□□□□□ -1.15
NDE2YDL085W SNG1P46950 547 aa7.85□□□□□ -1.15
NDE2YDL085W GCD14P46959 383 aaPredicted RBP7.85□□□□□ -1.15
NDE2YDL085W BNA3P47039 444 aaKnown RBP7.85□□□□□ -1.15
NDE2YDL085W EMC2P47133 292 aaKnown RBP7.85□□□□□ -1.15
NDE2YDL085W GET1P53192 235 aa7.85□□□□□ -1.15
NDE2YDL085W YNL010WP53981 241 aaKnown RBP7.85□□□□□ -1.15
NDE2YDL085W LSM3P57743 89 aaKnown RBP7.85□□□□□ -1.15
NDE2YDL085W SKI8Q02793 397 aaPredicted RBP7.85□□□□□ -1.15
NDE2YDL085W ECM22Q05958 814 aaPredicted RBP7.85□□□□□ -1.15
NDE2YDL085W NSL1Q12143 216 aa7.85□□□□□ -1.15
NDE2YDL085W MDY2Q12285 212 aa7.85□□□□□ -1.15
NDE2YDL085W DBP10Q12389 995 aaKnown RBP7.85□□□□□ -1.15
NDE2YDL085W SEM1O94742 89 aa7.85□□□□□ -1.15
NDE2YDL085W COX5AP00424 153 aa7.85□□□□□ -1.15
NDE2YDL085W CSM1P25651 190 aa7.85□□□□□ -1.15
NDE2YDL085W POT1P27796 417 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
NDE2YDL085W EAP1P36041 632 aaKnown RBP7.85□□□□□ -1.15
NDE2YDL085W ECM13P38195 257 aa7.85□□□□□ -1.15
NDE2YDL085W FES1P38260 290 aa7.85□□□□□ -1.15
NDE2YDL085W BRL1P38770 471 aa7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms