RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP30	YCR021C	GDA1	P32621	518 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	SEC6	P32844	805 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	CNS1	P33313	385 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	SLD2	P34252	453 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	ALY1	P36117	915 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	SPP381	P38282	291 aa	Predicted RBP	4.11	□□□□□ -1.75
HSP30	YCR021C	YHL008C	P38750	627 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	RPS14B	P39516	138 aa	Known RBP	4.11	□□□□□ -1.75
HSP30	YCR021C	SCC4	P40090	624 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	MGS1	P40151	587 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	SMX2	P40204	77 aa	Known RBP	4.11	□□□□□ -1.75
HSP30	YCR021C	ERG10	P41338	398 aa	Known RBP	4.11	□□□□□ -1.75
HSP30	YCR021C	TES1	P41903	349 aa	Known RBP	4.11	□□□□□ -1.75
HSP30	YCR021C	BST1	P43571	1029 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	RTT101	P47050	842 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	URB2	P47108	1174 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	ZIP2	P53061	704 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	NPY1	P53164	384 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	CPR6	P53691	371 aa	Known RBP	4.11	□□□□□ -1.75
HSP30	YCR021C	PIR1	Q03178	341 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	SEG1	Q04279	960 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	ADE13	Q05911	482 aa	Known RBP	4.11	□□□□□ -1.75
HSP30	YCR021C	RSB1	Q08417	382 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	NRT1	Q08485	598 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	YLL054C	Q12244	843 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	SVS1	Q12254	260 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	PDH1	Q12428	516 aa	Known RBP	4.11	□□□□□ -1.75
HSP30	YCR021C	YLR149C	Q99296	730 aa		4.11	□□□□□ -1.75
HSP30	YCR021C	MPH2	P0CD99	609 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	YMR085W	P0CF18	432 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	ERR1	P0CX10	437 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	ERR2	P0CX11	437 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	REV1	P12689	985 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	MTF1	P14908	341 aa	Known RBP	4.1	□□□□□ -1.75
HSP30	YCR021C	SPO16	P17122	198 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
HSP30	YCR021C	RBK1	P25332	333 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	MSH1	P25846	959 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	DEP1	P31385	405 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	KAR9	P32526	644 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	UBC6	P33296	250 aa	Predicted RBP	4.1	□□□□□ -1.75
HSP30	YCR021C	MSR1	P38714	643 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	SMF2	P38778	549 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	INA22	P40576	216 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	CHS6	P40955	746 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	OYE3	P41816	400 aa	Predicted RBP	4.1	□□□□□ -1.75
HSP30	YCR021C	ERR3	P42222	437 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	YJR079W	P47126	109 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	YNR063W	P53749	607 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	COG6	P53959	839 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	VPS9	P54787	451 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	DOS2	P54858	310 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	LEE1	Q02799	301 aa	Known RBP	4.1	□□□□□ -1.75
HSP30	YCR021C	NSE5	Q03718	556 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	RTN1	Q04947	295 aa	Known RBP	4.1	□□□□□ -1.75
HSP30	YCR021C	YLR046C	Q12253	270 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	RMD5	Q12508	421 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	SEY1	Q99287	776 aa		4.1	□□□□□ -1.75
HSP30	YCR021C	FLP1	P03870	423 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	SPS1	P08458	490 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	IMA3	P0CW40	589 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	IMA4	P0CW41	589 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
HSP30	YCR021C	CLN1	P20437	546 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	SEC14	P24280	304 aa	Known RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	CLB1	P24868	471 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	SGF29	P25554	259 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	YCL068C	P25593	260 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	URA7	P28274	579 aa	Known RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	MRPL9	P31334	269 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	PHO11	P35842	467 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	KES1	P35844	434 aa	Known RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	MUD2	P36084	527 aa	Known RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	SEA4	P38164	1038 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	KAP104	P38217	918 aa	Known RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	OLA1	P38219	394 aa	Known RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	PHO12	P38693	467 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	OAF1	P39720	1047 aa	Predicted RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	HEM14	P40012	539 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	DOT6	P40059	670 aa	Known RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	ELO3	P40319	345 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	MND2	P40577	368 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	ROK1	P45818	564 aa	Predicted RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	DLD2	P46681	530 aa	Known RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	CTK3	P46963	296 aa	Predicted RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	MNN11	P46985	422 aa	Known RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	HLJ1	P48353	224 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	YNR061C	P53747	219 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	YNL247W	P53852	767 aa	Known RBP	4.09	□□□□□ -1.75
HSP30	YCR021C	UBX4	P54730	416 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	ARP4	P80428	489 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	SDH1	Q00711	640 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	YMR206W	Q03695	313 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	BSC2	Q05611	235 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	YET3	Q07451	203 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	IMA2	Q08295	589 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	APC5	Q08683	685 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	CIR2	Q08822	631 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	PER33	Q12144	273 aa		4.09	□□□□□ -1.75
HSP30	YCR021C	UPC2	Q12151	913 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms