RNA–Protein interactions for RNA: YCL037C

SRO9, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SRO9, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRO9	YCL037C	YBL029W	P38201	376 aa		4.6	□□□□□ -1.67
SRO9	YCL037C	IME4	P41833	600 aa		4.6	□□□□□ -1.67
SRO9	YCL037C	VPS75	P53853	264 aa		4.6	□□□□□ -1.67
SRO9	YCL037C	UBP16	Q02863	499 aa		4.6	□□□□□ -1.67
SRO9	YCL037C	FCP1	Q03254	732 aa		4.6	□□□□□ -1.67
SRO9	YCL037C	WAR1	Q03631	944 aa		4.6	□□□□□ -1.67
SRO9	YCL037C	ORM2	Q06144	216 aa		4.6	□□□□□ -1.67
SRO9	YCL037C	RIX7	Q07844	837 aa	Known RBP	4.6	□□□□□ -1.67
SRO9	YCL037C	LCB4	Q12246	624 aa		4.6	□□□□□ -1.67
SRO9	YCL037C	NOP58	Q12499	511 aa	Known RBP	4.6	□□□□□ -1.67
SRO9	YCL037C	YOR019W	Q99248	730 aa		4.6	□□□□□ -1.67
SRO9	YCL037C	YMR084W	A2P2R3	262 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	ARG3	P05150	338 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	AQY1	P0CD91	305 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	KAR3	P17119	729 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	PTP1	P25044	335 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	RPF2	P36160	344 aa	Known RBP	4.59	□□□□□ -1.67
SRO9	YCL037C	ERC1	P38767	581 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	NPA3	P47122	385 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	MRX6	P48564	524 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	ATP23	P53722	227 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	NGL3	Q03210	505 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	CIR2	Q08822	631 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	CTI6	Q08923	506 aa		4.59	□□□□□ -1.67
SRO9	YCL037C	COX1	P00401	534 aa		4.58	□□□□□ -1.68
SRO9	YCL037C	MBR1	P23493	339 aa		4.58	□□□□□ -1.68
SRO9	YCL037C	SIP1	P32578	815 aa		4.58	□□□□□ -1.68
SRO9	YCL037C	MTG2	P38860	518 aa		4.58	□□□□□ -1.68
SRO9	YCL037C	RTS1	P38903	757 aa		4.58	□□□□□ -1.68
SRO9	YCL037C	FUN12	P39730	1002 aa	Known RBP	4.58	□□□□□ -1.68
SRO9	YCL037C	ARF3	P40994	183 aa	RIP-Chip data	4.58	□□□□□ -1.68	not detected
SRO9	YCL037C	INA17	Q02888	182 aa		4.58	□□□□□ -1.68
SRO9	YCL037C	SYF1	Q04048	859 aa	Predicted RBP	4.58	□□□□□ -1.68
SRO9	YCL037C	IRC3	Q06683	689 aa		4.58	□□□□□ -1.68
SRO9	YCL037C	GDA1	P32621	518 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	KTR3	P38130	404 aa	Predicted RBP	4.57	□□□□□ -1.68
SRO9	YCL037C	VBA2	P38358	474 aa	Known RBP	4.57	□□□□□ -1.68
SRO9	YCL037C	UTP9	P38882	575 aa	Known RBP	4.57	□□□□□ -1.68
SRO9	YCL037C	EXO1	P39875	702 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	PHM8	P40025	321 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	JHD1	P40034	492 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	RGI2	P40188	164 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	OPT1	P40897	799 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	SNM1	P40993	198 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	DSD1	P53095	428 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	YPL071C	Q02864	156 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	ARP9	Q05123	467 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	CRN1	Q06440	651 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	SPN1	Q06505	410 aa	Predicted RBP	4.57	□□□□□ -1.68
SRO9	YCL037C	YPL191C	Q08930	360 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	PCL8	Q08966	492 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	RCN2	Q12044	265 aa		4.57	□□□□□ -1.68
SRO9	YCL037C	AHA1	Q12449	350 aa	Known RBP	4.57	□□□□□ -1.68
SRO9	YCL037C	PGA3	Q12746	312 aa	Known RBP	4.57	□□□□□ -1.68
SRO9	YCL037C	YBR085C-A	O43137	85 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	MET17	P06106	444 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	FUR1	P18562	216 aa	Known RBP	4.56	□□□□□ -1.68
SRO9	YCL037C	SRP54	P20424	541 aa	Known RBP	4.56	□□□□□ -1.68
SRO9	YCL037C	CDC15	P27636	974 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	AUR1	P36107	401 aa	Predicted RBP	4.56	□□□□□ -1.68
SRO9	YCL037C	SAP1	P39955	897 aa	Known RBP	4.56	□□□□□ -1.68
SRO9	YCL037C	LTP1	P40347	161 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	SEC24	P40482	926 aa	Known RBP	4.56	□□□□□ -1.68
SRO9	YCL037C	SPO22	P40511	975 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	CIR1	P42940	261 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	NET1	P47035	1189 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	BNA3	P47039	444 aa	Known RBP	4.56	□□□□□ -1.68
SRO9	YCL037C	UBX6	P47049	396 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	YGL036W	P53185	909 aa	Predicted RBP	4.56	□□□□□ -1.68
SRO9	YCL037C	COG2	P53271	262 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	DCP2	P53550	970 aa	Known RBP	4.56	□□□□□ -1.68
SRO9	YCL037C	MDG1	P53885	366 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	RPT6	Q01939	405 aa	Known RBP	4.56	□□□□□ -1.68
SRO9	YCL037C	RAD33	Q04231	177 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	YDR109C	Q04585	715 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	YML053C	Q04978	212 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	SKG3	Q06315	1026 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	GPN2	Q08726	347 aa	Predicted RBP	4.56	□□□□□ -1.68
SRO9	YCL037C	YPL272C	Q08984	517 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	RRG1	Q12167	365 aa	Predicted RBP	4.56	□□□□□ -1.68
SRO9	YCL037C	SPE4	Q12455	300 aa		4.56	□□□□□ -1.68
SRO9	YCL037C	PCT1	P13259	424 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	RED1	P14291	827 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	ROX1	P25042	368 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	RRP43	P25359	394 aa	Predicted RBP	4.55	□□□□□ -1.68
SRO9	YCL037C	LAC1	P28496	418 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	ERG3	P32353	365 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	MAL33	P38157	468 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	UBP13	P38187	747 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	APD1	P38281	316 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	YNG2	P38806	282 aa	Known RBP	4.55	□□□□□ -1.68
SRO9	YCL037C	SWP82	P43554	623 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	LYS4	P49367	693 aa	Predicted RBP	4.55	□□□□□ -1.68
SRO9	YCL037C	HRD3	Q05787	833 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	TCO89	Q08921	799 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	LYS21	Q12122	440 aa	Known RBP	4.55	□□□□□ -1.68
SRO9	YCL037C	FRE7	Q12333	620 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	SFI1	Q12369	946 aa		4.55	□□□□□ -1.68
SRO9	YCL037C	SES1	P07284	462 aa	Known RBP	4.54	□□□□□ -1.68
SRO9	YCL037C	OCA4	P25366	362 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms