RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W MCR1P36060 302 aaKnown RBP4.94□□□□□ -1.62
RER1YCL001W DBP7P36120 742 aaKnown RBP4.94□□□□□ -1.62
RER1YCL001W AFG3P39925 761 aa4.94□□□□□ -1.62
RER1YCL001W SAE2P46946 345 aa4.94□□□□□ -1.62
RER1YCL001W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.94□□□□□ -1.62not detected
RER1YCL001W ERP3Q12403 225 aa4.94□□□□□ -1.62
RER1YCL001W SAM1P10659 382 aaKnown RBP4.93□□□□□ -1.62
RER1YCL001W YAP1P19880 650 aaKnown RBP4.93□□□□□ -1.62
RER1YCL001W TKL1P23254 680 aaKnown RBP4.93□□□□□ -1.62
RER1YCL001W MRC1P25588 1096 aa4.93□□□□□ -1.62
RER1YCL001W MCM4P30665 933 aaKnown RBP4.93□□□□□ -1.62
RER1YCL001W TOM20P35180 183 aa4.93□□□□□ -1.62
RER1YCL001W OPY1P38271 328 aa4.93□□□□□ -1.62
RER1YCL001W YFL040WP43562 540 aa4.93□□□□□ -1.62
RER1YCL001W YJR120WP47157 116 aa4.93□□□□□ -1.62
RER1YCL001W FMS1P50264 508 aa4.93□□□□□ -1.62
RER1YCL001W LIF1P53150 421 aa4.93□□□□□ -1.62
RER1YCL001W SUE1Q06524 206 aa4.93□□□□□ -1.62
RER1YCL001W PGA3Q12746 312 aaKnown RBP4.93□□□□□ -1.62
RER1YCL001W YOR111WQ99210 232 aa4.93□□□□□ -1.62
RER1YCL001W AAC1P04710 309 aa4.92□□□□□ -1.62
RER1YCL001W MATALPHA2P0CY08 210 aa4.92□□□□□ -1.62
RER1YCL001W HMLALPHA2P0CY09 210 aa4.92□□□□□ -1.62
RER1YCL001W YJU2P28320 278 aaPredicted RBP4.92□□□□□ -1.62
RER1YCL001W DGR2P32330 852 aa4.92□□□□□ -1.62
RER1YCL001W SHP1P34223 423 aa4.92□□□□□ -1.62
RER1YCL001W UIP5P36137 443 aa4.92□□□□□ -1.62
RER1YCL001W TPM2P40414 161 aa4.92□□□□□ -1.62
RER1YCL001W VIP1Q06685 1146 aaKnown RBP4.92□□□□□ -1.62
RER1YCL001W TRE2Q08693 809 aa4.92□□□□□ -1.62
RER1YCL001W TFC4P33339 1025 aa4.91□□□□□ -1.62
RER1YCL001W BMH2P34730 273 aaKnown RBP4.91□□□□□ -1.62
RER1YCL001W RMA1P36001 430 aaKnown RBP4.91□□□□□ -1.62
RER1YCL001W YBR071WP38243 211 aa4.91□□□□□ -1.62
RER1YCL001W DUG1P43616 481 aaKnown RBP4.91□□□□□ -1.62
RER1YCL001W PEF1P53238 335 aa4.91□□□□□ -1.62
RER1YCL001W SLD5Q03406 294 aa4.91□□□□□ -1.62
RER1YCL001W YMR321CQ04898 105 aa4.91□□□□□ -1.62
RER1YCL001W YDR341CQ05506 607 aaKnown RBP4.91□□□□□ -1.62
RER1YCL001W HRD3Q05787 833 aa4.91□□□□□ -1.62
RER1YCL001W YMR085WP0CF18 432 aa4.9□□□□□ -1.63
RER1YCL001W POX1P13711 748 aa4.9□□□□□ -1.63
RER1YCL001W PWP2P25635 923 aaKnown RBP4.9□□□□□ -1.63
RER1YCL001W PXL1P36166 706 aa4.9□□□□□ -1.63
RER1YCL001W RXT2P38255 430 aa4.9□□□□□ -1.63
RER1YCL001W NDT80P38830 627 aa4.9□□□□□ -1.63
RER1YCL001W NOC2P39744 710 aaKnown RBP4.9□□□□□ -1.63
RER1YCL001W TPO3Q06451 622 aa4.9□□□□□ -1.63
RER1YCL001W CBP3P21560 335 aa4.89□□□□□ -1.63
RER1YCL001W SWI4P25302 1093 aaKnown RBP4.89□□□□□ -1.63
RER1YCL001W DAL3P32459 195 aa4.89□□□□□ -1.63
RER1YCL001W HXT4P32467 576 aa4.89□□□□□ -1.63
RER1YCL001W DSS4P32601 143 aa4.89□□□□□ -1.63
RER1YCL001W REG2P38232 338 aa4.89□□□□□ -1.63
RER1YCL001W SKP2P42843 763 aa4.89□□□□□ -1.63
RER1YCL001W ASE1P50275 885 aa4.89□□□□□ -1.63
RER1YCL001W YGL138CP53122 345 aa4.89□□□□□ -1.63
RER1YCL001W YGL039WP53183 348 aaKnown RBP4.89□□□□□ -1.63
RER1YCL001W RET3P53600 189 aa4.89□□□□□ -1.63
RER1YCL001W COG6P53959 839 aa4.89□□□□□ -1.63
RER1YCL001W AHA1Q12449 350 aaKnown RBP4.89□□□□□ -1.63
RER1YCL001W RMP1Q12530 201 aa4.89□□□□□ -1.63
RER1YCL001W TAO3P40468 2376 aa4.89□□□□□ -1.63
RER1YCL001W MYO1P08964 1928 aa4.88□□□□□ -1.63
RER1YCL001W YPR089WO13585 888 aa4.88□□□□□ -1.63
RER1YCL001W SNA3P14359 133 aa4.88□□□□□ -1.63
RER1YCL001W AEP2P22136 580 aa4.88□□□□□ -1.63
RER1YCL001W RME1P32338 300 aaKnown RBP4.88□□□□□ -1.63
RER1YCL001W HMF1P40037 129 aaKnown RBP4.88□□□□□ -1.63
RER1YCL001W GPP2P40106 250 aaKnown RBP4.88□□□□□ -1.63
RER1YCL001W YPL071CQ02864 156 aa4.88□□□□□ -1.63
RER1YCL001W PSK2Q08217 1101 aa4.88□□□□□ -1.63
RER1YCL001W CRT10Q08226 957 aa4.88□□□□□ -1.63
RER1YCL001W CEX1Q12453 761 aa4.88□□□□□ -1.63
RER1YCL001W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
RER1YCL001W ARP6Q12509 438 aa4.88□□□□□ -1.63
RER1YCL001W RNR2P09938 399 aaKnown RBP4.87□□□□□ -1.63
RER1YCL001W YER190C-BP0CX94 160 aa4.87□□□□□ -1.63
RER1YCL001W YEL077W-AP0CX95 160 aa4.87□□□□□ -1.63
RER1YCL001W YGR296C-BP0CX96 160 aa4.87□□□□□ -1.63
RER1YCL001W YPL283W-BP0CX97 160 aa4.87□□□□□ -1.63
RER1YCL001W YPR204C-AP0CX98 160 aa4.87□□□□□ -1.63
RER1YCL001W YPK1P12688 680 aaKnown RBP4.87□□□□□ -1.63
RER1YCL001W TVP38P36164 337 aa4.87□□□□□ -1.63
RER1YCL001W YIL024CP40543 189 aa4.87□□□□□ -1.63
RER1YCL001W NIT2P47016 307 aa4.87□□□□□ -1.63
RER1YCL001W CYK3Q07533 885 aa4.87□□□□□ -1.63
RER1YCL001W NGL1Q08213 363 aaKnown RBP4.87□□□□□ -1.63
RER1YCL001W RTP1Q12751 981 aa4.87□□□□□ -1.63
RER1YCL001W BI2P03873 423 aa4.86□□□□□ -1.63
RER1YCL001W SES1P07284 462 aaKnown RBP4.86□□□□□ -1.63
RER1YCL001W PCK1P10963 549 aa4.86□□□□□ -1.63
RER1YCL001W BET2P20133 325 aa4.86□□□□□ -1.63
RER1YCL001W CDC5P32562 705 aa4.86□□□□□ -1.63
RER1YCL001W CFD1P40558 293 aa4.86□□□□□ -1.63
RER1YCL001W YIR014WP40570 242 aa4.86□□□□□ -1.63
RER1YCL001W EPL1P43572 832 aa4.86□□□□□ -1.63
RER1YCL001W RNR4P49723 345 aaKnown RBP4.86□□□□□ -1.63
RER1YCL001W PEX14P53112 341 aa4.86□□□□□ -1.63
RER1YCL001W YNL092WP53934 400 aa4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms