RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 UBN2Q6ZU65 1347 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 GSG1L2A8MUP6 293 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 URI1O94763 535 aaPredicted RBP12.93□□□□□ -0.34
BCAS3-220ENST00000588720 TTLL12Q14166 644 aaPredicted RBP12.93□□□□□ -0.34
BCAS3-220ENST00000588720 STOX1Q6ZVD7 989 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 IPO4Q8TEX9 1081 aaKnown RBP12.93□□□□□ -0.34
BCAS3-220ENST00000588720 SMCO2A6NFE2 343 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 USP17L8P0C7I0 530 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 LINC00301Q8NCQ3 95 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 PLIN2Q99541 437 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 PPP6R2O75170 966 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 CHGBP05060 677 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 PPP1R2P41236 205 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 MNAT1P51948 309 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 EXOSC10Q01780 885 aaKnown RBP12.93□□□□□ -0.34
BCAS3-220ENST00000588720 TXNRD1Q16881 649 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 ZNF75DP51815 510 aa12.92□□□□□ -0.34
BCAS3-220ENST00000588720 CCDC17Q96LX7 622 aa12.92□□□□□ -0.34
BCAS3-220ENST00000588720 CRACR2AQ9BSW2 395 aa12.92□□□□□ -0.34
BCAS3-220ENST00000588720 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.92□□□□□ -0.34
BCAS3-220ENST00000588720 TRIM21P19474 475 aaKnown RBP12.92□□□□□ -0.34
BCAS3-220ENST00000588720 SV2BQ7L1I2 683 aa12.92□□□□□ -0.34
BCAS3-220ENST00000588720 CD209Q9NNX6 404 aa12.92□□□□□ -0.34
BCAS3-220ENST00000588720 NEDD4P46934 1319 aa12.92□□□□□ -0.34
BCAS3-220ENST00000588720 HSPA1LP34931 641 aa12.92□□□□□ -0.34
BCAS3-220ENST00000588720 NDUFA8P51970 172 aa12.92□□□□□ -0.34
BCAS3-220ENST00000588720 MASTLQ96GX5 879 aa12.92□□□□□ -0.34
BCAS3-220ENST00000588720 SWAP70Q9UH65 585 aa12.92□□□□□ -0.34
BCAS3-220ENST00000588720 MMP1P03956 469 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 CCDC181Q5TID7 509 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 CYB5R4Q7L1T6 521 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 CASQ1P31415 396 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 TXKP42681 527 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 SKIDA1Q1XH10 827 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 SMIM5Q71RC9 77 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 A6NNZ2 444 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 RCAN1P53805 252 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 TUBB8Q3ZCM7 444 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 TTC31Q49AM3 519 aaPredicted RBP12.91□□□□□ -0.34
BCAS3-220ENST00000588720 CC2D2BQ6DHV5 1058 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 DGKHQ86XP1 1220 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 SERPINB13Q9UIV8 391 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 PEAK1Q9H792 1746 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 PRPF3O43395 683 aaKnown RBP12.91□□□□□ -0.34
BCAS3-220ENST00000588720 GOLGA8HP0CJ92 632 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 GBP2P32456 591 aaPredicted RBP12.91□□□□□ -0.34
BCAS3-220ENST00000588720 TRAPPC10P48553 1259 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 CERKLQ49MI3 558 aaPredicted RBP12.91□□□□□ -0.34
BCAS3-220ENST00000588720 VPS36Q86VN1 386 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 SERTAD1Q9UHV2 236 aa12.91□□□□□ -0.34
BCAS3-220ENST00000588720 USO1O60763 962 aaKnown RBP12.9□□□□□ -0.34
BCAS3-220ENST00000588720 BRD2P25440 801 aaKnown RBP12.9□□□□□ -0.34
BCAS3-220ENST00000588720 TCERG1LQ5VWI1 586 aa12.9□□□□□ -0.34
BCAS3-220ENST00000588720 GPR101Q96P66 508 aaPredicted RBP12.9□□□□□ -0.34
BCAS3-220ENST00000588720 FTOQ9C0B1 505 aaKnown RBP eCLIP12.9□□□□□ -0.34
BCAS3-220ENST00000588720 DCP1AQ9NPI6 582 aaPredicted RBP12.9□□□□□ -0.34
BCAS3-220ENST00000588720 LRWD1Q9UFC0 647 aa12.9□□□□□ -0.34
BCAS3-220ENST00000588720 ODF2Q5BJF6 829 aa12.9□□□□□ -0.34
BCAS3-220ENST00000588720 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.34
BCAS3-220ENST00000588720 FANCCQ00597 558 aa12.9□□□□□ -0.34
BCAS3-220ENST00000588720 TDRD12Q587J7 1177 aaKnown RBP12.9□□□□□ -0.34
BCAS3-220ENST00000588720 KRBA2Q6ZNG9 492 aa12.9□□□□□ -0.34
BCAS3-220ENST00000588720 SGMS1Q86VZ5 419 aa12.9□□□□□ -0.34
BCAS3-220ENST00000588720 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.34
BCAS3-220ENST00000588720 KCNB2Q92953 911 aa12.9□□□□□ -0.34
BCAS3-220ENST00000588720 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
BCAS3-220ENST00000588720 DBNDD1Q9H9R9 158 aa12.9□□□□□ -0.34
BCAS3-220ENST00000588720 HOMEZQ8IX15 550 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 GPKOWQ92917 476 aaPredicted RBP eCLIP12.89□□□□□ -0.35
BCAS3-220ENST00000588720 AIFM3Q96NN9 605 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 CLIC6Q96NY7 704 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 LY9Q9HBG7 655 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 CETN1Q12798 172 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 PNOCQ13519 176 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 WDR78Q5VTH9 848 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 DYNLL2Q96FJ2 89 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 NFE2L3Q9Y4A8 694 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 GJA3Q9Y6H8 435 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 CALCRLQ16602 461 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 SYCP3Q8IZU3 236 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 SEPT11Q9NVA2 429 aaKnown RBP12.89□□□□□ -0.35
BCAS3-220ENST00000588720 STK36Q9NRP7 1315 aa12.89□□□□□ -0.35
BCAS3-220ENST00000588720 A0A1B0GUA9 196 aa12.88□□□□□ -0.35
BCAS3-220ENST00000588720 PTGDRQ13258 359 aa12.88□□□□□ -0.35
BCAS3-220ENST00000588720 INF2Q27J81 1249 aa12.88□□□□□ -0.35
BCAS3-220ENST00000588720 GPATCH4Q5T3I0 446 aaKnown RBP12.88□□□□□ -0.35
BCAS3-220ENST00000588720 HAUS3Q68CZ6 603 aa12.88□□□□□ -0.35
BCAS3-220ENST00000588720 PPP4R3AQ6IN85 833 aa12.88□□□□□ -0.35
BCAS3-220ENST00000588720 FCHSD1Q86WN1 690 aa12.88□□□□□ -0.35
BCAS3-220ENST00000588720 CCT6AP40227 531 aaKnown RBP12.88□□□□□ -0.35
BCAS3-220ENST00000588720 GNG11P61952 73 aa12.88□□□□□ -0.35
BCAS3-220ENST00000588720 PDE4DQ08499 809 aa12.88□□□□□ -0.35
BCAS3-220ENST00000588720 ASPRV1Q53RT3 343 aa12.88□□□□□ -0.35
BCAS3-220ENST00000588720 TRMT1LQ7Z2T5 733 aaKnown RBP12.88□□□□□ -0.35
BCAS3-220ENST00000588720 SH3RF3Q8TEJ3 882 aaPredicted RBP12.88□□□□□ -0.35
BCAS3-220ENST00000588720 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.88□□□□□ -0.35
BCAS3-220ENST00000588720 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms