RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 NISCHQ9Y2I1 1504 aa22.14■■□□□ 1.13
BCAS3-220ENST00000588720 DCAF8L2P0C7V8 631 aa20.49■□□□□ 0.87
BCAS3-220ENST00000588720 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
BCAS3-220ENST00000588720 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
BCAS3-220ENST00000588720 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
BCAS3-220ENST00000588720 MYT1Q01538 1121 aa18.51■□□□□ 0.55
BCAS3-220ENST00000588720 ABCC9O60706 1549 aa18.5■□□□□ 0.55
BCAS3-220ENST00000588720 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
BCAS3-220ENST00000588720 PELP1Q8IZL8 1130 aaKnown RBP18.41■□□□□ 0.54
BCAS3-220ENST00000588720 EHMT2Q96KQ7 1210 aa18.33■□□□□ 0.53
BCAS3-220ENST00000588720 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
BCAS3-220ENST00000588720 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
BCAS3-220ENST00000588720 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
BCAS3-220ENST00000588720 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
BCAS3-220ENST00000588720 SCRIBQ14160 1630 aa17.93■□□□□ 0.46
BCAS3-220ENST00000588720 APLP2Q06481 763 aa17.93■□□□□ 0.46
BCAS3-220ENST00000588720 PCGF6Q9BYE7 350 aa17.91■□□□□ 0.46
BCAS3-220ENST00000588720 DCAF1Q9Y4B6 1507 aa17.89■□□□□ 0.45
BCAS3-220ENST00000588720 UBTFP17480 764 aaKnown RBP17.8■□□□□ 0.44
BCAS3-220ENST00000588720 NACADO15069 1562 aa17.76■□□□□ 0.43
BCAS3-220ENST00000588720 LOC105371045A0A1W2PR82 267 aa17.75■□□□□ 0.43
BCAS3-220ENST00000588720 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
BCAS3-220ENST00000588720 RANGAP1P46060 587 aaPredicted RBP17.67■□□□□ 0.42
BCAS3-220ENST00000588720 TTBK1Q5TCY1 1321 aaPredicted RBP17.66■□□□□ 0.42
BCAS3-220ENST00000588720 TRIM26Q12899 539 aaPredicted RBP17.52■□□□□ 0.4
BCAS3-220ENST00000588720 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
BCAS3-220ENST00000588720 ZEB1P37275 1124 aaPredicted RBP17.49■□□□□ 0.39
BCAS3-220ENST00000588720 MYO15BQ96JP2 1530 aa17.48■□□□□ 0.39
BCAS3-220ENST00000588720 PPARGC1BQ86YN6 1023 aaKnown RBP17.42■□□□□ 0.38
BCAS3-220ENST00000588720 CCER1Q8TC90 406 aaPredicted RBP17.39■□□□□ 0.37
BCAS3-220ENST00000588720 ATP1B4Q9UN42 357 aaPredicted RBP17.39■□□□□ 0.37
BCAS3-220ENST00000588720 HRCP23327 699 aa17.37■□□□□ 0.37
BCAS3-220ENST00000588720 CECR2Q9BXF3 1484 aa17.28■□□□□ 0.36
BCAS3-220ENST00000588720 BAZ1AQ9NRL2 1556 aaPredicted RBP17.27■□□□□ 0.35
BCAS3-220ENST00000588720 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
BCAS3-220ENST00000588720 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
BCAS3-220ENST00000588720 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
BCAS3-220ENST00000588720 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
BCAS3-220ENST00000588720 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.31
BCAS3-220ENST00000588720 ITGAEP38570 1179 aa16.96■□□□□ 0.31
BCAS3-220ENST00000588720 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
BCAS3-220ENST00000588720 EEA1Q15075 1411 aa16.93■□□□□ 0.3
BCAS3-220ENST00000588720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
BCAS3-220ENST00000588720 WIZO95785 1651 aa16.88■□□□□ 0.29
BCAS3-220ENST00000588720 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
BCAS3-220ENST00000588720 ERICH6Q7L0X2 663 aa16.87■□□□□ 0.29
BCAS3-220ENST00000588720 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
BCAS3-220ENST00000588720 TOP2AP11388 1531 aaKnown RBP16.84■□□□□ 0.29
BCAS3-220ENST00000588720 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
BCAS3-220ENST00000588720 GOLGA3Q08378 1498 aa16.75■□□□□ 0.27
BCAS3-220ENST00000588720 FAM50AQ14320 339 aaKnown RBP16.75■□□□□ 0.27
BCAS3-220ENST00000588720 P3H3Q8IVL6 736 aa16.74■□□□□ 0.27
BCAS3-220ENST00000588720 ATAD2BQ9ULI0 1458 aa16.72■□□□□ 0.27
BCAS3-220ENST00000588720 CLIP1P30622 1438 aa16.7■□□□□ 0.26
BCAS3-220ENST00000588720 FBLN2P98095 1184 aa16.7■□□□□ 0.26
BCAS3-220ENST00000588720 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
BCAS3-220ENST00000588720 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
BCAS3-220ENST00000588720 KIF27Q86VH2 1401 aa16.68■□□□□ 0.26
BCAS3-220ENST00000588720 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
BCAS3-220ENST00000588720 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
BCAS3-220ENST00000588720 SOGA1O94964 1423 aa16.64■□□□□ 0.26
BCAS3-220ENST00000588720 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
BCAS3-220ENST00000588720 DIEXFQ68CQ4 756 aaKnown RBP16.5■□□□□ 0.23
BCAS3-220ENST00000588720 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
BCAS3-220ENST00000588720 MYT1LQ9UL68 1186 aa16.48■□□□□ 0.23
BCAS3-220ENST00000588720 CDK11AQ9UQ88 783 aaPredicted RBP16.48■□□□□ 0.23
BCAS3-220ENST00000588720 TRIM52Q96A61 297 aa16.47■□□□□ 0.23
BCAS3-220ENST00000588720 ARID3CA6NKF2 412 aa16.46■□□□□ 0.23
BCAS3-220ENST00000588720 CUX2O14529 1486 aa16.46■□□□□ 0.23
BCAS3-220ENST00000588720 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
BCAS3-220ENST00000588720 NEUROD1Q13562 356 aa16.43■□□□□ 0.22
BCAS3-220ENST00000588720 NEFLP07196 543 aa16.42■□□□□ 0.22
BCAS3-220ENST00000588720 CARMIL1Q5VZK9 1371 aa16.42■□□□□ 0.22
BCAS3-220ENST00000588720 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
BCAS3-220ENST00000588720 PDS5BQ9NTI5 1447 aa16.4■□□□□ 0.22
BCAS3-220ENST00000588720 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
BCAS3-220ENST00000588720 ZNF316A6NFI3 1004 aaPredicted RBP16.37■□□□□ 0.21
BCAS3-220ENST00000588720 MTUS2Q5JR59 1369 aa16.36■□□□□ 0.21
BCAS3-220ENST00000588720 BICRAQ9NZM4 1560 aa16.35■□□□□ 0.21
BCAS3-220ENST00000588720 GTF3C3Q9Y5Q9 886 aa16.33■□□□□ 0.2
BCAS3-220ENST00000588720 ERCC6Q03468 1493 aa16.32■□□□□ 0.2
BCAS3-220ENST00000588720 VPS8Q8N3P4 1428 aa16.31■□□□□ 0.2
BCAS3-220ENST00000588720 RUSC2Q8N2Y8 1516 aa16.29■□□□□ 0.2
BCAS3-220ENST00000588720 ZNF777Q9ULD5 760 aaPredicted RBP16.29■□□□□ 0.2
BCAS3-220ENST00000588720 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
BCAS3-220ENST00000588720 POLR3GLQ9BT43 218 aa16.26■□□□□ 0.19
BCAS3-220ENST00000588720 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
BCAS3-220ENST00000588720 FANCD2Q9BXW9 1451 aa16.24■□□□□ 0.19
BCAS3-220ENST00000588720 RAPGEF2Q9Y4G8 1499 aa16.23■□□□□ 0.19
BCAS3-220ENST00000588720 TDRD9Q8NDG6 1382 aaKnown RBP16.22■□□□□ 0.19
BCAS3-220ENST00000588720 HMGXB3Q12766 1538 aa16.21■□□□□ 0.19
BCAS3-220ENST00000588720 CFTRP13569 1480 aa16.17■□□□□ 0.18
BCAS3-220ENST00000588720 CHIC2Q9UKJ5 165 aa16.16■□□□□ 0.18
BCAS3-220ENST00000588720 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
BCAS3-220ENST00000588720 TONSLQ96HA7 1378 aa16.14■□□□□ 0.17
BCAS3-220ENST00000588720 CCNB3Q8WWL7 1395 aa16.12■□□□□ 0.17
BCAS3-220ENST00000588720 PEG3Q9GZU2 1588 aa16.12■□□□□ 0.17
BCAS3-220ENST00000588720 SCAF1Q9H7N4 1312 aaKnown RBP16.12■□□□□ 0.17
BCAS3-220ENST00000588720 ZNF326Q5BKZ1 582 aaKnown RBP16.11■□□□□ 0.17
BCAS3-220ENST00000588720 PLEKHD1A6NEE1 506 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms