RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YKR018CP36114 725 aa-1.37□□□□□ -2.63
snR40snR40 CRG1P38892 291 aaRIP-Chip data-1.37□□□□□ -2.63not detected
snR40snR40 BRE5P53741 515 aaKnown RBP-1.37□□□□□ -2.63
snR40snR40 BSC5P53755 489 aa-1.37□□□□□ -2.63
snR40snR40 ATP25Q03153 612 aa-1.37□□□□□ -2.63
snR40snR40 PBA1Q05778 276 aa-1.37□□□□□ -2.63
snR40snR40 THI3Q07471 609 aa-1.37□□□□□ -2.63
snR40snR40 CWC2Q12046 339 aaPredicted RBP-1.37□□□□□ -2.63
snR40snR40 SCH9P11792 824 aaKnown RBP-1.38□□□□□ -2.63
snR40snR40 AMD2P22580 549 aa-1.38□□□□□ -2.63
snR40snR40 SCT1P32784 759 aa-1.38□□□□□ -2.63
snR40snR40 FAT1P38225 669 aa-1.38□□□□□ -2.63
snR40snR40 RRP8P38961 392 aaKnown RBP-1.38□□□□□ -2.63
snR40snR40 LRO1P40345 661 aa-1.38□□□□□ -2.63
snR40snR40 ATP22P50273 684 aaPredicted RBP-1.38□□□□□ -2.63
snR40snR40 HOL1P53389 586 aa-1.38□□□□□ -2.63
snR40snR40 YML119WQ03208 357 aa-1.38□□□□□ -2.63
snR40snR40 RCR2Q03446 210 aaKnown RBP-1.38□□□□□ -2.63
snR40snR40 FUN19P28003 413 aaPredicted RBP-1.39□□□□□ -2.63
snR40snR40 SEC20P28791 383 aa-1.39□□□□□ -2.63
snR40snR40 SAC6P32599 642 aaKnown RBP-1.39□□□□□ -2.63
snR40snR40 PRY2P36110 329 aa-1.39□□□□□ -2.63
snR40snR40 MTC4P38335 694 aaKnown RBP-1.39□□□□□ -2.63
snR40snR40 YNL208WP40159 199 aaKnown RBP-1.39□□□□□ -2.63
snR40snR40 RET2P43621 546 aa-1.39□□□□□ -2.63
snR40snR40 YJR030CP47101 745 aa-1.39□□□□□ -2.63
snR40snR40 NPY1P53164 384 aa-1.39□□□□□ -2.63
snR40snR40 SEN54Q02825 467 aaPredicted RBP-1.39□□□□□ -2.63
snR40snR40 SPR28Q04921 423 aa-1.39□□□□□ -2.63
snR40snR40 RPL20AP0CX23 172 aaKnown RBP-1.4□□□□□ -2.63
snR40snR40 RPL20BP0CX24 172 aaPredicted RBP-1.4□□□□□ -2.63
snR40snR40 TPS2P31688 896 aaKnown RBP-1.4□□□□□ -2.63
snR40snR40 PBY1P38254 753 aa-1.4□□□□□ -2.63
snR40snR40 YHR033WP38690 423 aa-1.4□□□□□ -2.63
snR40snR40 SCC4P40090 624 aa-1.4□□□□□ -2.63
snR40snR40 YPR003CP53394 754 aa-1.4□□□□□ -2.63
snR40snR40 WSC2P53832 503 aa-1.4□□□□□ -2.63
snR40snR40 RPL34AP87262 121 aaPredicted RBP-1.4□□□□□ -2.63
snR40snR40 ECM9Q02202 377 aa-1.4□□□□□ -2.63
snR40snR40 MUB1Q03162 620 aa-1.4□□□□□ -2.63
snR40snR40 RSN1Q03516 953 aa-1.4□□□□□ -2.63
snR40snR40 IME1P21190 360 aa-1.41□□□□□ -2.64
snR40snR40 NAP1P25293 417 aaKnown RBP-1.41□□□□□ -2.64
snR40snR40 PTC6P25646 442 aa-1.41□□□□□ -2.64
snR40snR40 CDS1P38221 457 aa-1.41□□□□□ -2.64
snR40snR40 YHR210CP38893 341 aa-1.41□□□□□ -2.64
snR40snR40 YER130CP39959 443 aa-1.41□□□□□ -2.64
snR40snR40 THI12P42883 340 aa-1.41□□□□□ -2.64
snR40snR40 THI5P43534 340 aa-1.41□□□□□ -2.64
snR40snR40 CPR7P47103 393 aa-1.41□□□□□ -2.64
snR40snR40 THI11P47183 340 aa-1.41□□□□□ -2.64
snR40snR40 UBP16Q02863 499 aa-1.41□□□□□ -2.64
snR40snR40 RRN11Q04712 507 aa-1.41□□□□□ -2.64
snR40snR40 MCP2Q06567 569 aa-1.41□□□□□ -2.64
snR40snR40 THI13Q07748 340 aa-1.41□□□□□ -2.64
snR40snR40 YEH2Q07950 538 aa-1.41□□□□□ -2.64
snR40snR40 ILV2P07342 687 aaKnown RBP-1.42□□□□□ -2.64
snR40snR40 GPA1P08539 472 aa-1.42□□□□□ -2.64
snR40snR40 GID7P25569 745 aa-1.42□□□□□ -2.64
snR40snR40 PRE4P30657 266 aa-1.42□□□□□ -2.64
snR40snR40 MRP8P35719 219 aa-1.42□□□□□ -2.64
snR40snR40 PHD1P36093 366 aa-1.42□□□□□ -2.64
snR40snR40 TUL1P36096 758 aa-1.42□□□□□ -2.64
snR40snR40 SSZ1P38788 538 aaKnown RBP-1.42□□□□□ -2.64
snR40snR40 BUD16P39988 312 aa-1.42□□□□□ -2.64
snR40snR40 BUD8P41698 603 aa-1.42□□□□□ -2.64
snR40snR40 YJL144WP47009 104 aa-1.42□□□□□ -2.64
snR40snR40 SGF73P53165 657 aa-1.42□□□□□ -2.64
snR40snR40 YML053CQ04978 212 aa-1.42□□□□□ -2.64
snR40snR40 SVF1Q05515 481 aa-1.42□□□□□ -2.64
snR40snR40 YDL057WQ07379 328 aa-1.42□□□□□ -2.64
snR40snR40 SLF1Q12034 447 aaKnown RBP-1.42□□□□□ -2.64
snR40snR40 YCR006CP25350 157 aa-1.43□□□□□ -2.64
snR40snR40 EHT1P38295 451 aa-1.43□□□□□ -2.64
snR40snR40 YHR202WP38887 602 aa-1.43□□□□□ -2.64
snR40snR40 VHS2P40463 436 aa-1.43□□□□□ -2.64
snR40snR40 YIL067CP40514 678 aa-1.43□□□□□ -2.64
snR40snR40 HXT9P40885 567 aa-1.43□□□□□ -2.64
snR40snR40 PXA1P41909 870 aa-1.43□□□□□ -2.64
snR40snR40 YJR085CP47131 105 aaKnown RBP-1.43□□□□□ -2.64
snR40snR40 HXT11P54862 567 aa-1.43□□□□□ -2.64
snR40snR40 LEA1Q08963 238 aaPredicted RBP-1.43□□□□□ -2.64
snR40snR40 RAX2Q12465 1220 aa-1.43□□□□□ -2.64
snR40snR40 HBN1Q96VH4 193 aa-1.43□□□□□ -2.64
snR40snR40 YPR096CO13587 100 aa-1.44□□□□□ -2.64
snR40snR40 PUT4P15380 627 aa-1.44□□□□□ -2.64
snR40snR40 SNF6P18888 332 aa-1.44□□□□□ -2.64
snR40snR40 BET2P20133 325 aa-1.44□□□□□ -2.64
snR40snR40 MKK1P32490 508 aa-1.44□□□□□ -2.64
snR40snR40 PTR2P32901 601 aa-1.44□□□□□ -2.64
snR40snR40 KKQ8P36004 724 aa-1.44□□□□□ -2.64
snR40snR40 VBA2P38358 474 aaKnown RBP-1.44□□□□□ -2.64
snR40snR40 ERG7P38604 731 aa-1.44□□□□□ -2.64
snR40snR40 RRP3P38712 501 aaKnown RBP-1.44□□□□□ -2.64
snR40snR40 UBP6P43593 499 aaKnown RBP-1.44□□□□□ -2.64
snR40snR40 FAA4P47912 694 aaKnown RBP-1.44□□□□□ -2.64
snR40snR40 RNH70P53331 553 aa-1.44□□□□□ -2.64
snR40snR40 RPN4Q03465 531 aa-1.44□□□□□ -2.64
snR40snR40 PPN1Q04119 674 aa-1.44□□□□□ -2.64
snR40snR40 GLO2Q05584 274 aa-1.44□□□□□ -2.64
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms