RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	HCM1	P25364	564 aa		5.65	□□□□□ -1.5
UBA3	YPR066W	PRE2	P30656	287 aa	Known RBP	5.65	□□□□□ -1.5
UBA3	YPR066W	NTH1	P32356	751 aa		5.65	□□□□□ -1.5
UBA3	YPR066W	DSS4	P32601	143 aa		5.65	□□□□□ -1.5
UBA3	YPR066W	MRPL7	P36519	292 aa		5.65	□□□□□ -1.5
UBA3	YPR066W	FSH1	P38777	243 aa	Known RBP	5.65	□□□□□ -1.5
UBA3	YPR066W	YHR097C	P38809	366 aa	Known RBP	5.65	□□□□□ -1.5
UBA3	YPR066W	BST1	P43571	1029 aa		5.65	□□□□□ -1.5
UBA3	YPR066W	RNT1	Q02555	471 aa		5.65	□□□□□ -1.5
UBA3	YPR066W	EFR3	Q03653	782 aa	Known RBP	5.65	□□□□□ -1.5
UBA3	YPR066W	CSR1	Q06705	408 aa	Known RBP	5.65	□□□□□ -1.5
UBA3	YPR066W	AIM39	Q08223	395 aa		5.65	□□□□□ -1.5
UBA3	YPR066W	NTO1	Q12311	748 aa		5.65	□□□□□ -1.5
UBA3	YPR066W	CYB2	P00175	591 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	CDC16	P09798	840 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	HSC82	P15108	705 aa	Known RBP	5.64	□□□□□ -1.51
UBA3	YPR066W	FUB1	P25659	250 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	CTS1	P29029	562 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	ELF1	P36053	145 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	MUD2	P36084	527 aa	Known RBP	5.64	□□□□□ -1.51
UBA3	YPR066W	YBL028C	P38202	106 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	DPH1	P40487	425 aa	Known RBP	5.64	□□□□□ -1.51
UBA3	YPR066W	TEL2	P53038	688 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	ATG21	Q02887	496 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	RBA50	Q04418	439 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	HOF1	Q05080	669 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	YDL086W	Q07505	273 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	PCL8	Q08966	492 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	USV1	Q12132	391 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	SUL2	Q12325	893 aa		5.64	□□□□□ -1.51
UBA3	YPR066W	PPR1	P07272	904 aa	Predicted RBP	5.63	□□□□□ -1.51
UBA3	YPR066W	KRS1	P15180	591 aa	Known RBP	5.63	□□□□□ -1.51
UBA3	YPR066W	COQ1	P18900	473 aa		5.63	□□□□□ -1.51
UBA3	YPR066W	MRPL36	P36531	177 aa		5.63	□□□□□ -1.51
UBA3	YPR066W	PPS1	P38148	807 aa		5.63	□□□□□ -1.51
UBA3	YPR066W	SUL1	P38359	859 aa		5.63	□□□□□ -1.51
UBA3	YPR066W	TIF4631	P39935	952 aa	Known RBP	5.63	□□□□□ -1.51
UBA3	YPR066W	YER010C	P40011	234 aa		5.63	□□□□□ -1.51
UBA3	YPR066W	ARB1	P40024	610 aa	Known RBP	5.63	□□□□□ -1.51
UBA3	YPR066W	TMA108	P40462	946 aa		5.63	□□□□□ -1.51
UBA3	YPR066W	MLC1	P53141	149 aa		5.63	□□□□□ -1.51
UBA3	YPR066W	DHR2	P36009	735 aa	Predicted RBP	5.62	□□□□□ -1.51
UBA3	YPR066W	IDS2	P46958	469 aa		5.62	□□□□□ -1.51
UBA3	YPR066W	PSP1	P50896	841 aa	Known RBP	5.62	□□□□□ -1.51
UBA3	YPR066W	SAP4	P53036	818 aa		5.62	□□□□□ -1.51
UBA3	YPR066W	YGR151C	P53287	111 aa		5.62	□□□□□ -1.51
UBA3	YPR066W	YAP1802	P53309	568 aa		5.62	□□□□□ -1.51
UBA3	YPR066W	SNF12	P53628	566 aa		5.62	□□□□□ -1.51
UBA3	YPR066W	ESF2	P53743	316 aa	Known RBP	5.62	□□□□□ -1.51
UBA3	YPR066W	KEL3	Q08979	651 aa	Predicted RBP	5.62	□□□□□ -1.51
UBA3	YPR066W	PDR18	P53756	1333 aa		5.62	□□□□□ -1.51
UBA3	YPR066W	SAN1	P22470	610 aa		5.61	□□□□□ -1.51
UBA3	YPR066W	PRO3	P32263	286 aa	Known RBP	5.61	□□□□□ -1.51
UBA3	YPR066W	IMP2'	P32351	346 aa		5.61	□□□□□ -1.51
UBA3	YPR066W	UME6	P39001	836 aa		5.61	□□□□□ -1.51
UBA3	YPR066W	IRC24	P40580	263 aa		5.61	□□□□□ -1.51
UBA3	YPR066W	SNO4	Q04902	237 aa		5.61	□□□□□ -1.51
UBA3	YPR066W	NKP2	Q06162	153 aa		5.61	□□□□□ -1.51
UBA3	YPR066W	YSH1	Q06224	779 aa	Predicted RBP	5.61	□□□□□ -1.51
UBA3	YPR066W	YOL073C	Q08232	322 aa		5.61	□□□□□ -1.51
UBA3	YPR066W	HSP33	Q08914	237 aa	Known RBP	5.61	□□□□□ -1.51
UBA3	YPR066W	HSP32	Q08992	237 aa		5.61	□□□□□ -1.51
UBA3	YPR066W	COX17	Q12287	69 aa		5.61	□□□□□ -1.51
UBA3	YPR066W	MED1	Q12321	566 aa		5.61	□□□□□ -1.51
UBA3	YPR066W	NCB2	Q92317	146 aa		5.61	□□□□□ -1.51
UBA3	YPR066W	VPS34	P22543	875 aa		5.6	□□□□□ -1.51
UBA3	YPR066W	CAP1	P28495	268 aa	Known RBP	5.6	□□□□□ -1.51
UBA3	YPR066W	CBF2	P32504	956 aa		5.6	□□□□□ -1.51
UBA3	YPR066W	NOC2	P39744	710 aa	Known RBP	5.6	□□□□□ -1.51
UBA3	YPR066W	IRC8	P47046	822 aa		5.6	□□□□□ -1.51
UBA3	YPR066W	NMA2	P53204	395 aa		5.6	□□□□□ -1.51
UBA3	YPR066W	DIP5	P53388	608 aa		5.6	□□□□□ -1.51
UBA3	YPR066W	ATG4	P53867	494 aa		5.6	□□□□□ -1.51
UBA3	YPR066W	CBK1	P53894	756 aa		5.6	□□□□□ -1.51
UBA3	YPR066W	MDM1	Q01846	1127 aa		5.6	□□□□□ -1.51
UBA3	YPR066W	SKG3	Q06315	1026 aa		5.6	□□□□□ -1.51
UBA3	YPR066W	PET122	P10355	254 aa		5.59	□□□□□ -1.51
UBA3	YPR066W	ABF1	P14164	731 aa		5.59	□□□□□ -1.51
UBA3	YPR066W	PRE8	P23639	250 aa		5.59	□□□□□ -1.51
UBA3	YPR066W	RAD16	P31244	790 aa		5.59	□□□□□ -1.51
UBA3	YPR066W	TEF4	P36008	412 aa	Known RBP	5.59	□□□□□ -1.51
UBA3	YPR066W	UBS1	P38290	277 aa		5.59	□□□□□ -1.51
UBA3	YPR066W	RFC1	P38630	861 aa	Known RBP	5.59	□□□□□ -1.51
UBA3	YPR066W	YEL068C	P39977	110 aa		5.59	□□□□□ -1.51
UBA3	YPR066W	UPF3	P48412	387 aa	Known RBP	5.59	□□□□□ -1.51
UBA3	YPR066W	TAM41	P53230	385 aa		5.59	□□□□□ -1.51
UBA3	YPR066W	YPL108W	Q02872	168 aa	Predicted RBP	5.59	□□□□□ -1.51
UBA3	YPR066W	USA1	Q03714	838 aa		5.59	□□□□□ -1.51
UBA3	YPR066W	RKI1	Q12189	258 aa		5.59	□□□□□ -1.51
UBA3	YPR066W	TPK1	P06244	397 aa		5.58	□□□□□ -1.52
UBA3	YPR066W	FUM1	P08417	488 aa	Known RBP	5.58	□□□□□ -1.52
UBA3	YPR066W	SAM2	P19358	384 aa	Known RBP	5.58	□□□□□ -1.52
UBA3	YPR066W	YCR061W	P25639	631 aa		5.58	□□□□□ -1.52
UBA3	YPR066W	MPE1	P35728	441 aa	Known RBP	5.58	□□□□□ -1.52
UBA3	YPR066W	ERG7	P38604	731 aa		5.58	□□□□□ -1.52
UBA3	YPR066W	KSP1	P38691	1029 aa	Known RBP	5.58	□□□□□ -1.52
UBA3	YPR066W	UBP5	P39944	805 aa		5.58	□□□□□ -1.52
UBA3	YPR066W	NOP16	P40007	231 aa	Known RBP	5.58	□□□□□ -1.52
UBA3	YPR066W	NDE1	P40215	560 aa		5.58	□□□□□ -1.52
UBA3	YPR066W	MFM1	Q02783	413 aa		5.58	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms