RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	DAD2	P36162	133 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	MRPL40	P36534	297 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	MUP3	P38734	546 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	MRX1	P40050	688 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	PKP1	P40530	394 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	RLP7	P40693	322 aa	Known RBP	6.25	□□□□□ -1.41
TFB4	YPR056W	LYS4	P49367	693 aa	Predicted RBP	6.25	□□□□□ -1.41
TFB4	YPR056W	HOP2	P53187	214 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	SNZ1	Q03148	297 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	INP2	Q03824	705 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	SKG3	Q06315	1026 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	LUC7	Q07508	261 aa	Predicted RBP	6.25	□□□□□ -1.41
TFB4	YPR056W	RCN2	Q12044	265 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	NBP2	Q12163	236 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	YOR019W	Q99248	730 aa		6.25	□□□□□ -1.41
TFB4	YPR056W	TRP4	P07285	380 aa	Predicted RBP	6.24	□□□□□ -1.41
TFB4	YPR056W	YEL076C-A	P0CX16	216 aa		6.24	□□□□□ -1.41
TFB4	YPR056W	YLR464W	P0CX17	216 aa		6.24	□□□□□ -1.41
TFB4	YPR056W	EFT1	P32324	842 aa	Known RBP	6.24	□□□□□ -1.41
TFB4	YPR056W	MRE11	P32829	692 aa		6.24	□□□□□ -1.41
TFB4	YPR056W	HEL1	P36113	551 aa		6.24	□□□□□ -1.41
TFB4	YPR056W	ADH5	P38113	351 aa	Known RBP	6.24	□□□□□ -1.41
TFB4	YPR056W	FLC2	P39719	783 aa		6.24	□□□□□ -1.41
TFB4	YPR056W	SSP120	P39931	234 aa	Known RBP	6.24	□□□□□ -1.41
TFB4	YPR056W	AIM10	P39965	576 aa	Known RBP	6.24	□□□□□ -1.41
TFB4	YPR056W	YEL076C	P39971	216 aa		6.24	□□□□□ -1.41
TFB4	YPR056W	GIM3	P53900	129 aa		6.24	□□□□□ -1.41
TFB4	YPR056W	NGL3	Q03210	505 aa		6.24	□□□□□ -1.41
TFB4	YPR056W	FMP45	Q07651	309 aa		6.24	□□□□□ -1.41
TFB4	YPR056W	RRT8	Q08219	342 aa		6.24	□□□□□ -1.41
TFB4	YPR056W	RTK1	Q12100	620 aa	Predicted RBP	6.24	□□□□□ -1.41
TFB4	YPR056W	CHS5	Q12114	671 aa	Known RBP	6.24	□□□□□ -1.41
TFB4	YPR056W	PFK27	Q12471	397 aa	Predicted RBP	6.24	□□□□□ -1.41
TFB4	YPR056W	ADF1	Q2V2Q1	113 aa		6.24	□□□□□ -1.41
TFB4	YPR056W	DIF1	O13577	133 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	STE12	P13574	688 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	CBS1	P14066	229 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	RIT1	P23796	513 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	URA7	P28274	579 aa	Known RBP	6.23	□□□□□ -1.41
TFB4	YPR056W	CAP1	P28495	268 aa	Known RBP	6.23	□□□□□ -1.41
TFB4	YPR056W	DGR2	P32330	852 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	DPH5	P32469	300 aa	Predicted RBP	6.23	□□□□□ -1.41
TFB4	YPR056W	SRO77	P38163	1010 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	YHR054C	P38780	354 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	YDR089W	P38966	869 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	BUL1	P48524	976 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	PDR16	P53860	351 aa	Known RBP	6.23	□□□□□ -1.41
TFB4	YPR056W	NOP15	P53927	220 aa	Predicted RBP	6.23	□□□□□ -1.41
TFB4	YPR056W	GIS1	Q03833	894 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	ADE13	Q05911	482 aa	Known RBP	6.23	□□□□□ -1.41
TFB4	YPR056W	KAP95	Q06142	861 aa	Known RBP	6.23	□□□□□ -1.41
TFB4	YPR056W	ENT4	Q07872	247 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	RPN5	Q12250	445 aa	Known RBP	6.23	□□□□□ -1.41
TFB4	YPR056W	TAD3	Q9URQ3	322 aa		6.23	□□□□□ -1.41
TFB4	YPR056W	YLR302C	O13544	120 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	ADE3	P07245	946 aa	Known RBP	6.22	□□□□□ -1.41
TFB4	YPR056W	GAL7	P08431	366 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	YCL002C	P25565	263 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	YCR051W	P25631	222 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	PHO91	P27514	894 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	YKR075C	P36155	307 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	YBL029W	P38201	376 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	COS111	P38308	924 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	SMF1	P38925	575 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	YMR124W	P39523	943 aa	Known RBP	6.22	□□□□□ -1.41
TFB4	YPR056W	YJL070C	P40361	888 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	AIM20	P40451	204 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	SDP1	P40479	209 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	TCB2	P48231	1178 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	GPD1	Q00055	391 aa	Known RBP	6.22	□□□□□ -1.41
TFB4	YPR056W	MAK10	Q02197	733 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	PNG1	Q02890	363 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	LRS4	Q04087	347 aa	Known RBP	6.22	□□□□□ -1.41
TFB4	YPR056W	SSL1	Q04673	461 aa	Predicted RBP	6.22	□□□□□ -1.41
TFB4	YPR056W	CRR1	Q05790	422 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	MRD1	Q06106	887 aa	Known RBP	6.22	□□□□□ -1.41
TFB4	YPR056W	MMR1	Q06324	491 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	NMD4	Q12129	218 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	COX17	Q12287	69 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	YBR182C-A	Q8TGU6	64 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	Q0142	Q9ZZW4	58 aa		6.22	□□□□□ -1.41
TFB4	YPR056W	RFA1	P22336	621 aa	Known RBP	6.21	□□□□□ -1.42
TFB4	YPR056W	YCK1	P23291	538 aa		6.21	□□□□□ -1.42
TFB4	YPR056W	CAD1	P24813	409 aa	Known RBP	6.21	□□□□□ -1.42
TFB4	YPR056W	MRP20	P32387	263 aa		6.21	□□□□□ -1.42
TFB4	YPR056W	EFB1	P32471	206 aa	Known RBP	6.21	□□□□□ -1.42
TFB4	YPR056W	SRB2	P34162	210 aa		6.21	□□□□□ -1.42
TFB4	YPR056W	PEX32	P38292	413 aa		6.21	□□□□□ -1.42
TFB4	YPR056W	CTF8	P38877	133 aa		6.21	□□□□□ -1.42
TFB4	YPR056W	YEL057C	P39983	233 aa		6.21	□□□□□ -1.42
TFB4	YPR056W	PFK26	P40433	827 aa	Known RBP	6.21	□□□□□ -1.42
TFB4	YPR056W	MET18	P40469	1032 aa		6.21	□□□□□ -1.42
TFB4	YPR056W	MAD2	P40958	196 aa		6.21	□□□□□ -1.42
TFB4	YPR056W	SHR5	P41912	237 aa		6.21	□□□□□ -1.42
TFB4	YPR056W	LIA1	P47120	325 aa	Known RBP	6.21	□□□□□ -1.42
TFB4	YPR056W	MDR1	P53258	950 aa		6.21	□□□□□ -1.42
TFB4	YPR056W	REX2	P54964	269 aa	Known RBP	6.21	□□□□□ -1.42
TFB4	YPR056W	SLU7	Q02775	382 aa	Known RBP	6.21	□□□□□ -1.42
TFB4	YPR056W	EFR3	Q03653	782 aa	Known RBP	6.21	□□□□□ -1.42
TFB4	YPR056W	EST1	P17214	699 aa	Predicted RBP	6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms