RNA–Protein interactions for RNA: YPL074W

YTA6, Transcript of Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family, yeast

Gene YTA6, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTA6	YPL074W	VMR1	P38735	1592 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	TRP3	P00937	484 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	SCEI	P03882	235 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	PPR1	P07272	904 aa	Predicted RBP	4.9	□□□□□ -1.62
YTA6	YPL074W	PUT2	P07275	575 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	NSP1	P14907	823 aa	Known RBP	4.9	□□□□□ -1.62
YTA6	YPL074W	YSP3	P25036	478 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	PET127	P32606	800 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	YBR032W	P38223	100 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	BMT2	P38278	337 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	BCD1	P38772	366 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	GIC1	P38785	314 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	ORC6	P38826	435 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	YHR202W	P38887	602 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	SEO1	P39709	593 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	VFA1	P40080	203 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	ATG32	P40458	529 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	MAM33	P40513	266 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	HSH155	P49955	971 aa	Known RBP	4.9	□□□□□ -1.62
YTA6	YPL074W	PRP24	P49960	444 aa	Known RBP	4.9	□□□□□ -1.62
YTA6	YPL074W	YGR237C	P50089	785 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	COG1	P53079	417 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	LSC2	P53312	427 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	GIM3	P53900	129 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	ARL3	Q02804	198 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	RRN5	Q02983	363 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	PKH3	Q03306	898 aa	Predicted RBP	4.9	□□□□□ -1.62
YTA6	YPL074W	SAS4	Q04003	481 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	UTP14	Q04500	899 aa	Known RBP	4.9	□□□□□ -1.62
YTA6	YPL074W	BSC2	Q05611	235 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	RBS1	Q05672	457 aa	Known RBP	4.9	□□□□□ -1.62
YTA6	YPL074W	KAP95	Q06142	861 aa	Known RBP	4.9	□□□□□ -1.62
YTA6	YPL074W	DGK1	Q12382	290 aa		4.9	□□□□□ -1.62
YTA6	YPL074W	FOB1	O13329	566 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	CBP2	P03874	630 aa	Predicted RBP	4.9	□□□□□ -1.63
YTA6	YPL074W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
YTA6	YPL074W	TIF1	P10081	395 aa	Known RBP	4.9	□□□□□ -1.63
YTA6	YPL074W	PRI2	P20457	528 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	RPC25	P35718	212 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	CUE2	P36075	443 aa	Known RBP	4.9	□□□□□ -1.63
YTA6	YPL074W	YKL077W	P36081	392 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	MRPL7	P36519	292 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	GND1	P38720	489 aa	Known RBP	4.9	□□□□□ -1.63
YTA6	YPL074W	RIM4	P38741	713 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	THO1	P40040	218 aa	Known RBP	4.9	□□□□□ -1.63
YTA6	YPL074W	EMP47	P43555	445 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	GYP8	P43570	497 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	SAE2	P46946	345 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	FOL2	P51601	243 aa	Known RBP	4.9	□□□□□ -1.63
YTA6	YPL074W	DSD1	P53095	428 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	MNP1	P53163	194 aa	Predicted RBP	4.9	□□□□□ -1.63
YTA6	YPL074W	YGR125W	P53273	1036 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	YDR249C	Q03787	373 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	ECI1	Q05871	280 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	PDR8	Q06149	701 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	GPN3	Q06543	272 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	DCN1	Q12395	269 aa		4.9	□□□□□ -1.63
YTA6	YPL074W	MATALPHA2	P0CY08	210 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	HMLALPHA2	P0CY09	210 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	CDC23	P16522	626 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	RNR3	P21672	869 aa	Known RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	FBP26	P32604	452 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	STV1	P37296	890 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	ECM21	P38167	1117 aa	Known RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	YBP1	P38315	674 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	SRP72	P38688	640 aa	Known RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	YHR078W	P38799	552 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	TPA1	P40032	644 aa	Known RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	CIN1	P40987	1014 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	LOC1	P43586	204 aa	Predicted RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
YTA6	YPL074W	IDS2	P46958	469 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	RPC17	P47076	161 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	ABM1	P47146	123 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	RET3	P53600	189 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	SKI8	Q02793	397 aa	Predicted RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	DIG1	Q03063	452 aa	Known RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	YML131W	Q03102	365 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	EBS1	Q03466	884 aa	Known RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	TIF35	Q04067	274 aa	Known RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	LUC7	Q07508	261 aa	Predicted RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	IWR1	Q07532	353 aa	Predicted RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	COS7	Q07788	383 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	FLC1	Q08967	793 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	CWC2	Q12046	339 aa	Predicted RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	OSW2	Q12202	724 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	PHM7	Q12252	991 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	ADF1	Q2V2Q1	113 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	LAG2	Q92325	660 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	ILV2	P07342	687 aa	Known RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	ABF1	P14164	731 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	FRS1	P15624	595 aa	Known RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	KGD1	P20967	1014 aa	Known RBP	4.89	□□□□□ -1.63
YTA6	YPL074W	PRP28	P23394	588 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	DGR2	P32330	852 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	SPT14	P32363	452 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	CAF4	P36130	643 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	SKG1	P36169	355 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	YPK3	P38070	525 aa		4.89	□□□□□ -1.63
YTA6	YPL074W	EDS1	P38073	919 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms