RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W IMH1Q06704 911 aaKnown RBP2.9□□□□□ -1.95
PEP12YOR036W SDH5Q08230 162 aa2.9□□□□□ -1.95
PEP12YOR036W YPL216WQ08964 1102 aa2.9□□□□□ -1.95
PEP12YOR036W MED1Q12321 566 aa2.9□□□□□ -1.95
PEP12YOR036W SEM1O94742 89 aa2.89□□□□□ -1.95
PEP12YOR036W TPK1P06244 397 aa2.89□□□□□ -1.95
PEP12YOR036W FUM1P08417 488 aaKnown RBP2.89□□□□□ -1.95
PEP12YOR036W PFK2P16862 959 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
PEP12YOR036W CDC5P32562 705 aa2.89□□□□□ -1.95
PEP12YOR036W GEX2P36173 615 aa2.89□□□□□ -1.95
PEP12YOR036W CCL1P37366 393 aa2.89□□□□□ -1.95
PEP12YOR036W TDA10P42938 290 aa2.89□□□□□ -1.95
PEP12YOR036W SAE2P46946 345 aa2.89□□□□□ -1.95
PEP12YOR036W UPF3P48412 387 aaKnown RBP2.89□□□□□ -1.95
PEP12YOR036W LYS20P48570 428 aaKnown RBP2.89□□□□□ -1.95
PEP12YOR036W TAM41P53230 385 aa2.89□□□□□ -1.95
PEP12YOR036W RPL15BP54780 204 aaPredicted RBP2.89□□□□□ -1.95
PEP12YOR036W MDM1Q01846 1127 aa2.89□□□□□ -1.95
PEP12YOR036W SNO4Q04902 237 aa2.89□□□□□ -1.95
PEP12YOR036W SNA4Q07549 140 aa2.89□□□□□ -1.95
PEP12YOR036W HSP33Q08914 237 aaKnown RBP2.89□□□□□ -1.95
PEP12YOR036W HSP32Q08992 237 aa2.89□□□□□ -1.95
PEP12YOR036W PCD1Q12524 340 aa2.89□□□□□ -1.95
PEP12YOR036W YBR255C-AQ3E776 120 aa2.89□□□□□ -1.95
PEP12YOR036W CDC16P09798 840 aa2.88□□□□□ -1.95
PEP12YOR036W TY2A-LR1P0C2J4 438 aa2.88□□□□□ -1.95
PEP12YOR036W TY2A-FP0CX61 438 aa2.88□□□□□ -1.95
PEP12YOR036W TY2A-GR2P0CX62 438 aa2.88□□□□□ -1.95
PEP12YOR036W SAN1P22470 610 aa2.88□□□□□ -1.95
PEP12YOR036W TY2A-CP25383 438 aa2.88□□□□□ -1.95
PEP12YOR036W SWC3P31376 625 aa2.88□□□□□ -1.95
PEP12YOR036W CNS1P33313 385 aa2.88□□□□□ -1.95
PEP12YOR036W MUD2P36084 527 aaKnown RBP2.88□□□□□ -1.95
PEP12YOR036W VPS8P39702 1274 aa2.88□□□□□ -1.95
PEP12YOR036W BUD16P39988 312 aa2.88□□□□□ -1.95
PEP12YOR036W ESL1P40456 1118 aa2.88□□□□□ -1.95
PEP12YOR036W CFD1P40558 293 aa2.88□□□□□ -1.95
PEP12YOR036W ZAP1P47043 880 aa2.88□□□□□ -1.95
PEP12YOR036W COP1P53622 1201 aaKnown RBP2.88□□□□□ -1.95
PEP12YOR036W CBK1P53894 756 aa2.88□□□□□ -1.95
PEP12YOR036W TY2A-DR2Q03483 438 aa2.88□□□□□ -1.95
PEP12YOR036W RCO1Q04779 684 aa2.88□□□□□ -1.95
PEP12YOR036W GTB1Q04924 702 aa2.88□□□□□ -1.95
PEP12YOR036W TPO3Q06451 622 aa2.88□□□□□ -1.95
PEP12YOR036W TSR2Q06672 205 aaKnown RBP2.88□□□□□ -1.95
PEP12YOR036W PCL8Q08966 492 aa2.88□□□□□ -1.95
PEP12YOR036W TY2A-BQ12260 438 aa2.88□□□□□ -1.95
PEP12YOR036W COX17Q12287 69 aa2.88□□□□□ -1.95
PEP12YOR036W TY2A-OR2Q12293 438 aa2.88□□□□□ -1.95
PEP12YOR036W TY2A-DR1Q12392 438 aa2.88□□□□□ -1.95
PEP12YOR036W TY2A-OR1Q12439 438 aa2.88□□□□□ -1.95
PEP12YOR036W TY2A-DR3Q99303 438 aa2.88□□□□□ -1.95
PEP12YOR036W CDC31P06704 161 aaKnown RBP2.87□□□□□ -1.95
PEP12YOR036W RPB2P08518 1224 aaKnown RBP2.87□□□□□ -1.95
PEP12YOR036W KGD2P19262 463 aaPredicted RBP2.87□□□□□ -1.95
PEP12YOR036W PDE1P22434 369 aa2.87□□□□□ -1.95
PEP12YOR036W URK1P27515 501 aa2.87□□□□□ -1.95
PEP12YOR036W MFT1P33441 392 aaKnown RBP2.87□□□□□ -1.95
PEP12YOR036W LOT5P34234 306 aa2.87□□□□□ -1.95
PEP12YOR036W MPE1P35728 441 aaKnown RBP2.87□□□□□ -1.95
PEP12YOR036W YPT10P38146 199 aa2.87□□□□□ -1.95
PEP12YOR036W YEL068CP39977 110 aa2.87□□□□□ -1.95
PEP12YOR036W IST3P40565 148 aaPredicted RBP2.87□□□□□ -1.95
PEP12YOR036W SIP4P46954 829 aa2.87□□□□□ -1.95
PEP12YOR036W SRB7P47822 140 aa2.87□□□□□ -1.95
PEP12YOR036W COG1P53079 417 aa2.87□□□□□ -1.95
PEP12YOR036W YNL092WP53934 400 aa2.87□□□□□ -1.95
PEP12YOR036W CRF1Q04930 467 aa2.87□□□□□ -1.95
PEP12YOR036W TGS1Q12052 315 aa2.87□□□□□ -1.95
PEP12YOR036W RVB2Q12464 471 aaKnown RBP2.87□□□□□ -1.95
PEP12YOR036W ATP2P00830 511 aaKnown RBP2.86□□□□□ -1.95
PEP12YOR036W AAC1P04710 309 aa2.86□□□□□ -1.95
PEP12YOR036W RPL19AP0CX82 189 aaKnown RBP2.86□□□□□ -1.95
PEP12YOR036W RPL19BP0CX83 189 aaPredicted RBP2.86□□□□□ -1.95
PEP12YOR036W SPO16P17122 198 aa2.86□□□□□ -1.95
PEP12YOR036W AAC3P18238 307 aa2.86□□□□□ -1.95
PEP12YOR036W LRE1P25579 583 aaKnown RBP2.86□□□□□ -1.95
PEP12YOR036W MRP20P32387 263 aa2.86□□□□□ -1.95
PEP12YOR036W GCD7P32502 381 aaPredicted RBP2.86□□□□□ -1.95
PEP12YOR036W NUP120P35729 1037 aa2.86□□□□□ -1.95
PEP12YOR036W ARO9P38840 513 aaPredicted RBP2.86□□□□□ -1.95
PEP12YOR036W FMP10P40098 244 aa2.86□□□□□ -1.95
PEP12YOR036W NDE1P40215 560 aa2.86□□□□□ -1.95
PEP12YOR036W ARC1P46672 376 aaKnown RBP2.86□□□□□ -1.95
PEP12YOR036W ASE1P50275 885 aa2.86□□□□□ -1.95
PEP12YOR036W VPS4P52917 437 aa2.86□□□□□ -1.95
PEP12YOR036W BSC5P53755 489 aa2.86□□□□□ -1.95
PEP12YOR036W MTG1Q03151 367 aaPredicted RBP2.86□□□□□ -1.95
PEP12YOR036W WAR1Q03631 944 aa2.86□□□□□ -1.95
PEP12YOR036W GFD1Q04839 188 aaKnown RBP2.86□□□□□ -1.95
PEP12YOR036W ATG23Q06671 453 aa2.86□□□□□ -1.95
PEP12YOR036W CRT10Q08226 957 aa2.86□□□□□ -1.95
PEP12YOR036W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
PEP12YOR036W NBP2Q12163 236 aa2.86□□□□□ -1.95
PEP12YOR036W YER175W-AQ8TGU4 54 aa2.86□□□□□ -1.95
PEP12YOR036W PNO1Q99216 274 aaKnown RBP2.86□□□□□ -1.95
PEP12YOR036W VCX1Q99385 411 aa2.86□□□□□ -1.95
PEP12YOR036W YLR302CO13544 120 aa2.85□□□□□ -1.95
PEP12YOR036W INH1P01097 85 aa2.85□□□□□ -1.95
PEP12YOR036W CHO2P05374 869 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms