RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS27	YNR006W	LYS4	P49367	693 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS27	YNR006W	SPT20	P50875	604 aa		4.07	□□□□□ -1.76
VPS27	YNR006W	COS12	P53053	380 aa		4.07	□□□□□ -1.76
VPS27	YNR006W	LCL3	P53153	274 aa		4.07	□□□□□ -1.76
VPS27	YNR006W	OGG1	P53397	376 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS27	YNR006W	TIM11	P81449	96 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS27	YNR006W	YLR224W	Q05947	369 aa		4.07	□□□□□ -1.76
VPS27	YNR006W	MMR1	Q06324	491 aa		4.07	□□□□□ -1.76
VPS27	YNR006W	YPL272C	Q08984	517 aa		4.07	□□□□□ -1.76
VPS27	YNR006W	RIM20	Q12033	661 aa		4.07	□□□□□ -1.76
VPS27	YNR006W	GPM3	Q12326	303 aa		4.07	□□□□□ -1.76
VPS27	YNR006W	TUF1	P02992	437 aa	Known RBP	4.06	□□□□□ -1.76
VPS27	YNR006W	RPS9B	P05755	195 aa	Known RBP	4.06	□□□□□ -1.76
VPS27	YNR006W	KIN82	P25341	720 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	YCR051W	P25631	222 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	ERV1	P27882	189 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	UBP11	P36026	717 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	HEL1	P36113	551 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	AIM3	P38266	947 aa	Known RBP	4.06	□□□□□ -1.76
VPS27	YNR006W	YBR259W	P38338	688 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	PCL7	P40186	285 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	PFK26	P40433	827 aa	Known RBP	4.06	□□□□□ -1.76
VPS27	YNR006W	TOF1	P53840	1238 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	YPL108W	Q02872	168 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS27	YNR006W	GTB1	Q04924	702 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	RGC1	Q06108	1083 aa	Known RBP	4.06	□□□□□ -1.76
VPS27	YNR006W	YEH1	Q07804	573 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	NUS1	Q12063	375 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	SPE3	Q12074	293 aa	Known RBP	4.06	□□□□□ -1.76
VPS27	YNR006W	YJR112W-A	Q3E743	109 aa		4.06	□□□□□ -1.76
VPS27	YNR006W	PNO1	Q99216	274 aa	Known RBP	4.06	□□□□□ -1.76
VPS27	YNR006W	CTT1	P06115	562 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	GAS1	P22146	559 aa	Known RBP	4.05	□□□□□ -1.76
VPS27	YNR006W	CLB3	P24870	427 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	TFB1	P32776	642 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	MAL33	P38157	468 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	REG2	P38232	338 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	VID24	P38263	362 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	FET5	P43561	622 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	ASE1	P50275	885 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	TEX1	P53851	422 aa	Known RBP	4.05	□□□□□ -1.76
VPS27	YNR006W	THI22	Q06490	572 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	ARR3	Q06598	404 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	AIM41	Q12032	185 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	SWM1	Q12379	170 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
VPS27	YNR006W	VPS33	P20795	691 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	CPR2	P23285	205 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	URK1	P27515	501 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	DCG1	P32460	244 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	SMI1	P32566	505 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	AUR1	P36107	401 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS27	YNR006W	APT2	P36973	181 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	KTR3	P38130	404 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS27	YNR006W	LRO1	P40345	661 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	SNF12	P53628	566 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	PRO2	P54885	456 aa	Known RBP	4.05	□□□□□ -1.76
VPS27	YNR006W	RPA49	Q01080	415 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS27	YNR006W	FDC1	Q03034	503 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	DPB4	Q04603	196 aa	Known RBP	4.05	□□□□□ -1.76
VPS27	YNR006W	ROY1	Q04847	553 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	MRD1	Q06106	887 aa	Known RBP	4.05	□□□□□ -1.76
VPS27	YNR006W	BUD7	Q08754	746 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	YOR019W	Q99248	730 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	YPT6	Q99260	215 aa		4.05	□□□□□ -1.76
VPS27	YNR006W	RPC40	P07703	335 aa	Known RBP	4.04	□□□□□ -1.76
VPS27	YNR006W	SNT1	P25357	1226 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	KAR4	P25583	335 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	GYP6	P32806	458 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	LST4	P34239	828 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	ADH5	P38113	351 aa	Known RBP	4.04	□□□□□ -1.76
VPS27	YNR006W	DOT5	P40553	215 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	RIM8	P53179	542 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	YGL036W	P53185	909 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS27	YNR006W	CUL3	P53202	744 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	MRPS35	P53292	345 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
VPS27	YNR006W	YNR068C	P53754	272 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	EOS1	P53938	366 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	TLG1	Q03322	224 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	RPC11	Q04307	110 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS27	YNR006W	PEX19	Q07418	342 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	PSY3	Q12318	242 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	CEX1	Q12453	761 aa		4.04	□□□□□ -1.76
VPS27	YNR006W	LAT1	P12695	482 aa	Known RBP	4.03	□□□□□ -1.76
VPS27	YNR006W	YCR015C	P25616	317 aa		4.03	□□□□□ -1.76
VPS27	YNR006W	RIB7	P33312	244 aa		4.03	□□□□□ -1.76
VPS27	YNR006W	RTT105	P40063	208 aa		4.03	□□□□□ -1.76
VPS27	YNR006W	IME4	P41833	600 aa		4.03	□□□□□ -1.76
VPS27	YNR006W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
VPS27	YNR006W	CLU1	Q03690	1277 aa	Known RBP	4.03	□□□□□ -1.76
VPS27	YNR006W	YML037C	Q03703	340 aa		4.03	□□□□□ -1.76
VPS27	YNR006W	HOF1	Q05080	669 aa		4.03	□□□□□ -1.76
VPS27	YNR006W	RPN5	Q12250	445 aa	Known RBP	4.03	□□□□□ -1.76
VPS27	YNR006W	ERG27	Q12452	347 aa	Known RBP	4.03	□□□□□ -1.76
VPS27	YNR006W	AFI1	Q99222	893 aa		4.03	□□□□□ -1.76
VPS27	YNR006W	YML003W	P0CF16	290 aa		4.03	□□□□□ -1.77
VPS27	YNR006W	PRP6	P19735	899 aa	Predicted RBP	4.03	□□□□□ -1.77
VPS27	YNR006W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.77	not detected
VPS27	YNR006W	PEX1	P24004	1043 aa		4.03	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 55 ms