RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W UBP12P39538 1254 aa3.86□□□□□ -1.79
UBP8YMR223W YPR003CP53394 754 aa3.86□□□□□ -1.79
UBP8YMR223W TAH18Q12181 623 aa3.86□□□□□ -1.79
UBP8YMR223W YMR230W-AQ3E7B5 62 aa3.86□□□□□ -1.79
UBP8YMR223W CDC23P16522 626 aa3.85□□□□□ -1.79
UBP8YMR223W PHO3P24031 467 aa3.85□□□□□ -1.79
UBP8YMR223W RPS7AP26786 190 aaKnown RBP3.85□□□□□ -1.79
UBP8YMR223W HES1P35843 434 aa3.85□□□□□ -1.79
UBP8YMR223W GRX7P38068 203 aa3.85□□□□□ -1.79
UBP8YMR223W YEN1P40028 759 aa3.85□□□□□ -1.79
UBP8YMR223W YNL034WP53963 612 aa3.85□□□□□ -1.79
UBP8YMR223W COG4Q06096 861 aa3.85□□□□□ -1.79
UBP8YMR223W AAD4Q07747 329 aa3.85□□□□□ -1.79
UBP8YMR223W RLP24Q07915 199 aaKnown RBP3.85□□□□□ -1.79
UBP8YMR223W DAL5P15365 543 aa3.84□□□□□ -1.79
UBP8YMR223W TRX2P22803 104 aaKnown RBP3.84□□□□□ -1.79
UBP8YMR223W ENP1P38333 483 aaKnown RBP3.84□□□□□ -1.79
UBP8YMR223W SCS2P40075 244 aaKnown RBP3.84□□□□□ -1.79
UBP8YMR223W ARP9Q05123 467 aa3.84□□□□□ -1.79
UBP8YMR223W NFU1P32860 256 aa3.83□□□□□ -1.8
UBP8YMR223W NOC2P39744 710 aaKnown RBP3.83□□□□□ -1.8
UBP8YMR223W PHM8P40025 321 aa3.83□□□□□ -1.8
UBP8YMR223W VPS27P40343 622 aaKnown RBP3.83□□□□□ -1.8
UBP8YMR223W ESF2P53743 316 aaKnown RBP3.83□□□□□ -1.8
UBP8YMR223W YMR254CQ04838 102 aa3.83□□□□□ -1.8
UBP8YMR223W YLR112WQ12130 139 aa3.83□□□□□ -1.8
UBP8YMR223W FUN12P39730 1002 aaKnown RBP3.82□□□□□ -1.8
UBP8YMR223W RPS0AP32905 252 aaKnown RBP3.81□□□□□ -1.8
UBP8YMR223W VPS24P36095 224 aaKnown RBP3.81□□□□□ -1.8
UBP8YMR223W SDS24P38314 527 aa3.81□□□□□ -1.8
UBP8YMR223W SAW1P39735 261 aa3.81□□□□□ -1.8
UBP8YMR223W UBX6P47049 396 aa3.81□□□□□ -1.8
UBP8YMR223W PSP1P50896 841 aaKnown RBP3.81□□□□□ -1.8
UBP8YMR223W FOL1P53848 824 aa3.81□□□□□ -1.8
UBP8YMR223W IZH1Q03419 316 aa3.81□□□□□ -1.8
UBP8YMR223W PHM6Q05637 104 aa3.81□□□□□ -1.8
UBP8YMR223W ERP4Q12450 207 aa3.81□□□□□ -1.8
UBP8YMR223W NKP1Q12493 238 aa3.81□□□□□ -1.8
UBP8YMR223W COX1P00401 534 aa3.8□□□□□ -1.8
UBP8YMR223W ASG1P40467 964 aa3.8□□□□□ -1.8
UBP8YMR223W MPP10P47083 593 aaKnown RBP3.8□□□□□ -1.8
UBP8YMR223W YGL036WP53185 909 aaPredicted RBP3.8□□□□□ -1.8
UBP8YMR223W SND1Q04007 877 aa3.8□□□□□ -1.8
UBP8YMR223W GTB1Q04924 702 aa3.8□□□□□ -1.8
UBP8YMR223W APL5Q08951 932 aaKnown RBP3.8□□□□□ -1.8
UBP8YMR223W ADH4P10127 382 aa3.79□□□□□ -1.8
UBP8YMR223W PWP2P25635 923 aaKnown RBP3.79□□□□□ -1.8
UBP8YMR223W YOX1P34161 385 aa3.79□□□□□ -1.8
UBP8YMR223W EFM2P38347 419 aa3.79□□□□□ -1.8
UBP8YMR223W CUL3P53202 744 aa3.79□□□□□ -1.8
UBP8YMR223W CNM67P53865 581 aaKnown RBP3.79□□□□□ -1.8
UBP8YMR223W ESBP6P53918 673 aa3.79□□□□□ -1.8
UBP8YMR223W MRP2P10663 115 aaPredicted RBP3.78□□□□□ -1.8
UBP8YMR223W YCR006CP25350 157 aa3.78□□□□□ -1.8
UBP8YMR223W PAF1P38351 445 aa3.78□□□□□ -1.8
UBP8YMR223W SWD1P39706 426 aa3.78□□□□□ -1.8
UBP8YMR223W PEX8P53248 589 aa3.78□□□□□ -1.8
UBP8YMR223W COG6P53959 839 aa3.78□□□□□ -1.8
UBP8YMR223W CRZ1P53968 678 aa3.78□□□□□ -1.8
UBP8YMR223W MEH1Q02205 184 aa3.78□□□□□ -1.8
UBP8YMR223W YPL108WQ02872 168 aaPredicted RBP3.78□□□□□ -1.8
UBP8YMR223W PSK2Q08217 1101 aa3.78□□□□□ -1.8
UBP8YMR223W FRE3Q08905 711 aa3.78□□□□□ -1.8
UBP8YMR223W NUR1Q12066 484 aa3.78□□□□□ -1.8
UBP8YMR223W SNU66Q12420 587 aaPredicted RBP3.78□□□□□ -1.8
UBP8YMR223W MRC1P25588 1096 aa3.78□□□□□ -1.8
UBP8YMR223W YJL070CP40361 888 aa3.78□□□□□ -1.8
UBP8YMR223W IMA5P40884 581 aa3.78□□□□□ -1.8
UBP8YMR223W YNL181WP53878 407 aa3.78□□□□□ -1.8
UBP8YMR223W BAG7Q12128 409 aa3.78□□□□□ -1.8
UBP8YMR223W RVB2Q12464 471 aaKnown RBP3.78□□□□□ -1.8
UBP8YMR223W TMA17Q12513 150 aa3.78□□□□□ -1.8
UBP8YMR223W SEC1P30619 724 aaKnown RBP3.77□□□□□ -1.81
UBP8YMR223W RPN12P32496 274 aa3.77□□□□□ -1.81
UBP8YMR223W MFT1P33441 392 aaKnown RBP3.77□□□□□ -1.81
UBP8YMR223W EBP2P36049 427 aaKnown RBP3.77□□□□□ -1.81
UBP8YMR223W YBR139WP38109 508 aa3.77□□□□□ -1.81
UBP8YMR223W DHH1P39517 506 aaKnown RBP3.77□□□□□ -1.81
UBP8YMR223W IML2P47031 731 aa3.77□□□□□ -1.81
UBP8YMR223W MSY1P48527 492 aa3.77□□□□□ -1.81
UBP8YMR223W YGR079WP53249 370 aa3.77□□□□□ -1.81
UBP8YMR223W YDR109CQ04585 715 aa3.77□□□□□ -1.81
UBP8YMR223W PIF1P07271 859 aa3.76□□□□□ -1.81
UBP8YMR223W GPA1P08539 472 aa3.76□□□□□ -1.81
UBP8YMR223W HNM1P19807 563 aa3.76□□□□□ -1.81
UBP8YMR223W OPI1P21957 404 aa3.76□□□□□ -1.81
UBP8YMR223W ATG27P46989 271 aa3.76□□□□□ -1.81
UBP8YMR223W YLR455WQ06188 304 aa3.76□□□□□ -1.81
UBP8YMR223W FRD1P32614 470 aaKnown RBP3.75□□□□□ -1.81
UBP8YMR223W RAD24P32641 659 aa3.75□□□□□ -1.81
UBP8YMR223W VID27P40157 782 aa3.75□□□□□ -1.81
UBP8YMR223W YGR021WP53212 290 aa3.75□□□□□ -1.81
UBP8YMR223W IMP4P53941 290 aaKnown RBP3.75□□□□□ -1.81
UBP8YMR223W ATG16Q03818 150 aa3.75□□□□□ -1.81
UBP8YMR223W TIP41Q12199 356 aa3.75□□□□□ -1.81
UBP8YMR223W CBP1P07252 654 aa3.74□□□□□ -1.81
UBP8YMR223W SUI3P09064 285 aaKnown RBP3.74□□□□□ -1.81
UBP8YMR223W YML002WP0CF17 737 aa3.74□□□□□ -1.81
UBP8YMR223W RPN2P32565 945 aaKnown RBP3.74□□□□□ -1.81
UBP8YMR223W BLI1P35727 113 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms