RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C YDR222WQ04925 415 aa2.54□□□□□ -2
SGS1YMR190C BLS1Q06071 122 aa2.54□□□□□ -2
SGS1YMR190C HIS1P00498 297 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C MET2P08465 486 aa2.54□□□□□ -2
SGS1YMR190C ASP3-2P0CX77 362 aa2.54□□□□□ -2
SGS1YMR190C ASP3-3P0CX78 362 aa2.54□□□□□ -2
SGS1YMR190C ASP3-4P0CX79 362 aa2.54□□□□□ -2
SGS1YMR190C ASP3-1P0CZ17 362 aa2.54□□□□□ -2
SGS1YMR190C PEP5P12868 1029 aa2.54□□□□□ -2
SGS1YMR190C RRP43P25359 394 aaPredicted RBP2.54□□□□□ -2
SGS1YMR190C YIM1P28625 365 aa2.54□□□□□ -2
SGS1YMR190C MCM5P29496 775 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C NIP1P32497 812 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C SRB4P32569 687 aa2.54□□□□□ -2
SGS1YMR190C YSW1P38280 609 aa2.54□□□□□ -2
SGS1YMR190C KIC1P38692 1080 aa2.54□□□□□ -2
SGS1YMR190C MIC19P43594 170 aa2.54□□□□□ -2
SGS1YMR190C YMR1P47147 688 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SGS1YMR190C KAP114P53067 1004 aa2.54□□□□□ -2
SGS1YMR190C ZRG17P53735 605 aa2.54□□□□□ -2
SGS1YMR190C SNP1Q00916 300 aaPredicted RBP2.54□□□□□ -2
SGS1YMR190C YMR187CQ03236 431 aa2.54□□□□□ -2
SGS1YMR190C GCN5Q03330 439 aa2.54□□□□□ -2
SGS1YMR190C YMR160WQ03823 816 aa2.54□□□□□ -2
SGS1YMR190C YDR278CQ05612 105 aa2.54□□□□□ -2
SGS1YMR190C ATG23Q06671 453 aa2.54□□□□□ -2
SGS1YMR190C OPY2Q06810 360 aa2.54□□□□□ -2
SGS1YMR190C GPN2Q08726 347 aaPredicted RBP2.54□□□□□ -2
SGS1YMR190C WSC3Q12215 556 aa2.54□□□□□ -2
SGS1YMR190C COX4P04037 155 aa2.54□□□□□ -2
SGS1YMR190C CPA1P07258 411 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C SFL1P20134 766 aa2.54□□□□□ -2
SGS1YMR190C PEX2P32800 271 aa2.54□□□□□ -2
SGS1YMR190C YBR225WP38321 900 aa2.54□□□□□ -2
SGS1YMR190C SPC72P39723 622 aa2.54□□□□□ -2
SGS1YMR190C YJR030CP47101 745 aa2.54□□□□□ -2
SGS1YMR190C TPO2P53283 614 aa2.54□□□□□ -2
SGS1YMR190C EEB1Q02891 456 aa2.54□□□□□ -2
SGS1YMR190C SFH1Q06168 426 aa2.54□□□□□ -2
SGS1YMR190C WTM2Q12206 467 aa2.54□□□□□ -2
SGS1YMR190C BI2P03873 423 aa2.54□□□□□ -2
SGS1YMR190C CIT2P08679 460 aa2.54□□□□□ -2
SGS1YMR190C PHO84P25297 587 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C MUD1P32605 298 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C SWE1P32944 819 aa2.54□□□□□ -2
SGS1YMR190C SFC1P33303 322 aa2.54□□□□□ -2
SGS1YMR190C YPT52P36018 234 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C DMA1P38823 416 aa2.54□□□□□ -2
SGS1YMR190C SMC2P38989 1170 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C MPT5P39016 859 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SGS1YMR190C CAJ1P39101 391 aa2.54□□□□□ -2
SGS1YMR190C VNX1P42839 908 aa2.54□□□□□ -2
SGS1YMR190C OSW7P43611 510 aa2.54□□□□□ -2
SGS1YMR190C YJR039WP47107 1121 aa2.54□□□□□ -2
SGS1YMR190C ASN1P49089 572 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C PRP31P49704 494 aaPredicted RBP2.54□□□□□ -2
SGS1YMR190C MNN10P50108 393 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C RIM8P53179 542 aa2.54□□□□□ -2
SGS1YMR190C ENT4Q07872 247 aa2.54□□□□□ -2
SGS1YMR190C AAD15Q08361 143 aa2.54□□□□□ -2
SGS1YMR190C RIO1Q12196 484 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C RRP12Q12754 1228 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C BI3Q9ZZW7 517 aa2.54□□□□□ -2
SGS1YMR190C NUP1P20676 1076 aa2.53□□□□□ -2
SGS1YMR190C SPS22P25380 463 aa2.53□□□□□ -2
SGS1YMR190C PLC1P32383 869 aa2.53□□□□□ -2
SGS1YMR190C BYE1P36106 594 aa2.53□□□□□ -2
SGS1YMR190C SET3P36124 751 aa2.53□□□□□ -2
SGS1YMR190C KAE1P36132 386 aa2.53□□□□□ -2
SGS1YMR190C RPH1P39956 796 aa2.53□□□□□ -2
SGS1YMR190C AVT1P47082 602 aa2.53□□□□□ -2
SGS1YMR190C ORC5P50874 479 aa2.53□□□□□ -2
SGS1YMR190C COX18P53239 316 aa2.53□□□□□ -2
SGS1YMR190C RRB1Q04225 511 aaKnown RBP2.53□□□□□ -2
SGS1YMR190C ECM38Q05902 660 aaPredicted RBP2.53□□□□□ -2
SGS1YMR190C YOR223WQ12015 292 aa2.53□□□□□ -2
SGS1YMR190C HOS1Q12214 470 aa2.53□□□□□ -2
SGS1YMR190C SPO21Q12411 609 aa2.53□□□□□ -2
SGS1YMR190C COX6P00427 148 aa2.53□□□□□ -2
SGS1YMR190C INH1P01097 85 aa2.53□□□□□ -2
SGS1YMR190C GAL10P04397 699 aa2.53□□□□□ -2
SGS1YMR190C RPL15AP05748 204 aaKnown RBP2.53□□□□□ -2
SGS1YMR190C YML002WP0CF17 737 aa2.53□□□□□ -2
SGS1YMR190C HSF1P10961 833 aa2.53□□□□□ -2
SGS1YMR190C APA1P16550 321 aaKnown RBP2.53□□□□□ -2
SGS1YMR190C SPR1P32603 445 aa2.53□□□□□ -2
SGS1YMR190C DEF1P35732 738 aaKnown RBP2.53□□□□□ -2
SGS1YMR190C LCP5P40079 357 aaPredicted RBP2.53□□□□□ -2
SGS1YMR190C YNL320WP42840 284 aa2.53□□□□□ -2
SGS1YMR190C RPL15BP54780 204 aaPredicted RBP2.53□□□□□ -2
SGS1YMR190C RHO3Q00245 231 aaKnown RBP2.53□□□□□ -2
SGS1YMR190C MRS2Q01926 470 aa2.53□□□□□ -2
SGS1YMR190C RPM2Q02773 1202 aa2.53□□□□□ -2
SGS1YMR190C MTG1Q03151 367 aaPredicted RBP2.53□□□□□ -2
SGS1YMR190C LDB18Q07887 179 aa2.53□□□□□ -2
SGS1YMR190C BSC6Q08280 497 aa2.53□□□□□ -2
SGS1YMR190C YOL087CQ99247 1116 aa2.53□□□□□ -2
SGS1YMR190C ECM3Q99252 613 aa2.53□□□□□ -2
SGS1YMR190C YPK1P12688 680 aaKnown RBP2.53□□□□□ -2
SGS1YMR190C DAL1P32375 460 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms