RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	ARA1	P38115	344 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	PRS2	P38620	318 aa	Known RBP	7.38	□□□□□ -1.23
AFG2	YLR397C	FRT2	P39734	528 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	CIN1	P40987	1014 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	CWC23	P52868	283 aa	Predicted RBP	7.38	□□□□□ -1.23
AFG2	YLR397C	COG1	P53079	417 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	EGD1	Q02642	157 aa	Known RBP	7.38	□□□□□ -1.23
AFG2	YLR397C	ARL3	Q02804	198 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	YET2	Q04210	160 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	CAB1	Q04430	367 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	CRN1	Q06440	651 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	FRS1	P15624	595 aa	Known RBP	7.38	□□□□□ -1.23
AFG2	YLR397C	SAR1	P20606	190 aa	Known RBP	7.38	□□□□□ -1.23
AFG2	YLR397C	SAN1	P22470	610 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	RAD14	P28519	371 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	SEC1	P30619	724 aa	Known RBP	7.38	□□□□□ -1.23
AFG2	YLR397C	ORC2	P32833	620 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	RRN3	P36070	627 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	TGL4	P36165	910 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	ABZ1	P37254	787 aa	Predicted RBP	7.38	□□□□□ -1.23
AFG2	YLR397C	NAT2	P37293	288 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	YBR285W	P38354	144 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	IMD2	P38697	523 aa	Known RBP	7.38	□□□□□ -1.23
AFG2	YLR397C	SAW1	P39735	261 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	GUF1	P46943	645 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	PRY3	P47033	881 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	YMR027W	Q04371	470 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	NSE3	Q05541	303 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	MRX10	Q05648	414 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	ADE13	Q05911	482 aa	Known RBP	7.38	□□□□□ -1.23
AFG2	YLR397C	BCP1	Q06338	283 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	DIB1	Q06819	143 aa	Predicted RBP	7.38	□□□□□ -1.23
AFG2	YLR397C	THI21	Q08975	551 aa		7.38	□□□□□ -1.23
AFG2	YLR397C	NUP188	P52593	1655 aa	Known RBP	7.37	□□□□□ -1.23
AFG2	YLR397C	PFK1	P16861	987 aa	Known RBP	7.37	□□□□□ -1.23
AFG2	YLR397C	CBF1	P17106	351 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	GLK1	P17709	500 aa	Known RBP	7.37	□□□□□ -1.23
AFG2	YLR397C	RIT1	P23796	513 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	DAL80	P26343	269 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	RPS7A	P26786	190 aa	Known RBP	7.37	□□□□□ -1.23
AFG2	YLR397C	YSC84	P32793	468 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	YHR045W	P38775	560 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	RTC3	P38804	111 aa	Predicted RBP	7.37	□□□□□ -1.23
AFG2	YLR397C	GPB2	P39717	880 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	LSM8	P47093	109 aa	Known RBP	7.37	□□□□□ -1.23
AFG2	YLR397C	ARC35	P53731	342 aa	Known RBP	7.37	□□□□□ -1.23
AFG2	YLR397C	PGA2	P53903	129 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	NAN1	Q02931	896 aa	Known RBP	7.37	□□□□□ -1.23
AFG2	YLR397C	NSE5	Q03718	556 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	UFO1	Q04511	668 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	REX3	Q12090	404 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	YOR342C	Q12182	319 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	ATG34	Q12292	412 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	YCL001W-B	Q96VH2	84 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	YRF1-2	P40105	1681 aa		7.37	□□□□□ -1.23
AFG2	YLR397C	RNR3	P21672	869 aa	Known RBP	7.36	□□□□□ -1.23
AFG2	YLR397C	EMP65	P40085	556 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	UBP7	P40453	1071 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	HPM1	P40481	377 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	SAE2	P46946	345 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	PIP2	P52960	996 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	IMP4	P53941	290 aa	Known RBP	7.36	□□□□□ -1.23
AFG2	YLR397C	ECM23	Q02710	187 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	KAP95	Q06142	861 aa	Known RBP	7.36	□□□□□ -1.23
AFG2	YLR397C	VTA1	Q06263	330 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	YPD1	Q07688	167 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	PGC1	Q08959	321 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	YPR204W	Q08995	1032 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	LYS21	Q12122	440 aa	Known RBP	7.36	□□□□□ -1.23
AFG2	YLR397C	STB3	Q12427	513 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	SRN2	Q99176	213 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	ARG3	P05150	338 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	ARO3	P14843	370 aa	Known RBP	7.36	□□□□□ -1.23
AFG2	YLR397C	OM45	P16547	393 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	MCM5	P29496	775 aa	Known RBP	7.36	□□□□□ -1.23
AFG2	YLR397C	FUN26	P31381	517 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	VMA6	P32366	345 aa	Known RBP	7.36	□□□□□ -1.23
AFG2	YLR397C	UTR4	P32626	227 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	PPQ1	P32945	549 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	SKG1	P36169	355 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	CDS1	P38221	457 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	ORC6	P38826	435 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	STT3	P39007	718 aa	Known RBP	7.36	□□□□□ -1.23
AFG2	YLR397C	HXT10	P43581	546 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	7.36	□□□□□ -1.23	not detected
AFG2	YLR397C	IDS2	P46958	469 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	COS5	P47187	383 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	CUE3	P53137	624 aa	Known RBP	7.36	□□□□□ -1.23
AFG2	YLR397C	SPP1	Q03012	353 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	CSC1	Q06538	782 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	COS7	Q07788	383 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	ISA1	Q07821	250 aa	Predicted RBP	7.36	□□□□□ -1.23
AFG2	YLR397C	MCH5	Q08777	521 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	AEP3	Q12089	606 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	ATP14	Q12349	124 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	TCB1	Q12466	1186 aa		7.36	□□□□□ -1.23
AFG2	YLR397C	CBS2	P14905	389 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	CDC23	P16522	626 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	PPH22	P23595	377 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	PET309	P32522	965 aa	Predicted RBP	7.35	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms