RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C UBX6P47049 396 aa2.33□□□□□ -2.04
SGD1YLR336C ADE16P54113 591 aaKnown RBP2.33□□□□□ -2.04
SGD1YLR336C SPN1Q06505 410 aaPredicted RBP2.33□□□□□ -2.04
SGD1YLR336C NKP1Q12493 238 aa2.33□□□□□ -2.04
SGD1YLR336C HOM2P13663 365 aaKnown RBP2.33□□□□□ -2.04
SGD1YLR336C MUD2P36084 527 aaKnown RBP2.33□□□□□ -2.04
SGD1YLR336C YIL161WP40449 235 aaKnown RBP2.33□□□□□ -2.04
SGD1YLR336C ASE1P50275 885 aa2.33□□□□□ -2.04
SGD1YLR336C YDR056CQ12025 205 aa2.33□□□□□ -2.04
SGD1YLR336C YLR302CO13544 120 aa2.33□□□□□ -2.04
SGD1YLR336C RPB2P08518 1224 aaKnown RBP2.33□□□□□ -2.04
SGD1YLR336C SPO16P17122 198 aa2.33□□□□□ -2.04
SGD1YLR336C SRP54P20424 541 aaKnown RBP2.33□□□□□ -2.04
SGD1YLR336C MBR1P23493 339 aa2.33□□□□□ -2.04
SGD1YLR336C MRP20P32387 263 aa2.33□□□□□ -2.04
SGD1YLR336C RPT3P33298 428 aaKnown RBP2.33□□□□□ -2.04
SGD1YLR336C FTH1P38310 465 aa2.33□□□□□ -2.04
SGD1YLR336C DJP1P40564 432 aa2.33□□□□□ -2.04
SGD1YLR336C CIN1P40987 1014 aa2.33□□□□□ -2.04
SGD1YLR336C SWP82P43554 623 aa2.33□□□□□ -2.04
SGD1YLR336C LGE1Q02796 332 aaKnown RBP2.33□□□□□ -2.04
SGD1YLR336C BSP1Q06604 576 aa2.33□□□□□ -2.04
SGD1YLR336C SWA2Q06677 668 aa2.33□□□□□ -2.04
SGD1YLR336C PSK2Q08217 1101 aa2.33□□□□□ -2.04
SGD1YLR336C LEA1Q08963 238 aaPredicted RBP2.33□□□□□ -2.04
SGD1YLR336C LYS21Q12122 440 aaKnown RBP2.33□□□□□ -2.04
SGD1YLR336C YOR019WQ99248 730 aa2.33□□□□□ -2.04
SGD1YLR336C BI2P03873 423 aa2.32□□□□□ -2.04
SGD1YLR336C ILV2P07342 687 aaKnown RBP2.32□□□□□ -2.04
SGD1YLR336C CUE2P36075 443 aaKnown RBP2.32□□□□□ -2.04
SGD1YLR336C PFK26P40433 827 aaKnown RBP2.32□□□□□ -2.04
SGD1YLR336C CDC1P40986 491 aa2.32□□□□□ -2.04
SGD1YLR336C SIP4P46954 829 aa2.32□□□□□ -2.04
SGD1YLR336C ATP23P53722 227 aa2.32□□□□□ -2.04
SGD1YLR336C AAT1Q01802 451 aa2.32□□□□□ -2.04
SGD1YLR336C YMR018WQ04364 514 aa2.32□□□□□ -2.04
SGD1YLR336C CRN1Q06440 651 aa2.32□□□□□ -2.04
SGD1YLR336C OPY2Q06810 360 aa2.32□□□□□ -2.04
SGD1YLR336C BAG7Q12128 409 aa2.32□□□□□ -2.04
SGD1YLR336C NDJ1Q12366 352 aa2.32□□□□□ -2.04
SGD1YLR336C NUP1P20676 1076 aa2.32□□□□□ -2.04
SGD1YLR336C APN1P22936 367 aa2.32□□□□□ -2.04
SGD1YLR336C ATF1P40353 525 aa2.32□□□□□ -2.04
SGD1YLR336C MNT3P40549 630 aa2.32□□□□□ -2.04
SGD1YLR336C SUB1P54000 292 aaKnown RBP2.32□□□□□ -2.04
SGD1YLR336C THI7Q05998 598 aa2.32□□□□□ -2.04
SGD1YLR336C VIP1Q06685 1146 aaKnown RBP2.32□□□□□ -2.04
SGD1YLR336C YOR389WQ08912 624 aa2.32□□□□□ -2.04
SGD1YLR336C CET1O13297 549 aaPredicted RBP2.31□□□□□ -2.04
SGD1YLR336C FUM1P08417 488 aaKnown RBP2.31□□□□□ -2.04
SGD1YLR336C CHS3P29465 1165 aa2.31□□□□□ -2.04
SGD1YLR336C SRB5P32585 307 aa2.31□□□□□ -2.04
SGD1YLR336C UBP13P38187 747 aa2.31□□□□□ -2.04
SGD1YLR336C APD1P38281 316 aa2.31□□□□□ -2.04
SGD1YLR336C YEL068CP39977 110 aa2.31□□□□□ -2.04
SGD1YLR336C VPS4P52917 437 aa2.31□□□□□ -2.04
SGD1YLR336C SNU56Q03782 492 aaKnown RBP2.31□□□□□ -2.04
SGD1YLR336C TPO3Q06451 622 aa2.31□□□□□ -2.04
SGD1YLR336C GPN2Q08726 347 aaPredicted RBP2.31□□□□□ -2.04
SGD1YLR336C BPL1P48445 690 aaPredicted RBP2.31□□□□□ -2.04
SGD1YLR336C YRB30P53107 440 aaPredicted RBP2.31□□□□□ -2.04
SGD1YLR336C PIL1P53252 339 aaKnown RBP2.31□□□□□ -2.04
SGD1YLR336C YPL071CQ02864 156 aa2.31□□□□□ -2.04
SGD1YLR336C ENT4Q07872 247 aa2.31□□□□□ -2.04
SGD1YLR336C ERG27Q12452 347 aaKnown RBP2.31□□□□□ -2.04
SGD1YLR336C YNL162W-AQ3E7A8 72 aa2.31□□□□□ -2.04
SGD1YLR336C ALY1P36117 915 aa2.3□□□□□ -2.04
SGD1YLR336C YJR061WP40355 935 aa2.3□□□□□ -2.04
SGD1YLR336C LYS14P40971 790 aa2.3□□□□□ -2.04
SGD1YLR336C NMD5P46970 1048 aa2.3□□□□□ -2.04
SGD1YLR336C INN1P53901 409 aa2.3□□□□□ -2.04
SGD1YLR336C YKU80Q04437 629 aa2.3□□□□□ -2.04
SGD1YLR336C RCO1Q04779 684 aa2.3□□□□□ -2.04
SGD1YLR336C COQ11Q05892 277 aa2.3□□□□□ -2.04
SGD1YLR336C YER145C-AA0A023PYF4 145 aa2.3□□□□□ -2.04
SGD1YLR336C PET111P08468 800 aa2.3□□□□□ -2.04
SGD1YLR336C YMR085WP0CF18 432 aa2.3□□□□□ -2.04
SGD1YLR336C SAN1P22470 610 aa2.3□□□□□ -2.04
SGD1YLR336C NTR2P36118 322 aaPredicted RBP2.3□□□□□ -2.04
SGD1YLR336C ESL2P36168 1195 aa2.3□□□□□ -2.04
SGD1YLR336C ADE17P38009 592 aaKnown RBP2.3□□□□□ -2.04
SGD1YLR336C PHM8P40025 321 aa2.3□□□□□ -2.04
SGD1YLR336C IME4P41833 600 aa2.3□□□□□ -2.04
SGD1YLR336C UPF3P48412 387 aaKnown RBP2.3□□□□□ -2.04
SGD1YLR336C DCP2P53550 970 aaKnown RBP2.3□□□□□ -2.04
SGD1YLR336C YNL058CP53947 316 aa2.3□□□□□ -2.04
SGD1YLR336C RSC9Q03124 581 aa2.3□□□□□ -2.04
SGD1YLR336C THI3Q07471 609 aa2.3□□□□□ -2.04
SGD1YLR336C PFA4Q12006 378 aa2.3□□□□□ -2.04
SGD1YLR336C PGK1P00560 416 aaKnown RBP2.29□□□□□ -2.04
SGD1YLR336C GAL4P04386 881 aa2.29□□□□□ -2.04
SGD1YLR336C ORC2P32833 620 aa2.29□□□□□ -2.04
SGD1YLR336C SLZ1P40167 298 aa2.29□□□□□ -2.04
SGD1YLR336C SEC24P40482 926 aaKnown RBP2.29□□□□□ -2.04
SGD1YLR336C IRC7P43623 340 aa2.29□□□□□ -2.04
SGD1YLR336C YGL036WP53185 909 aaPredicted RBP2.29□□□□□ -2.04
SGD1YLR336C YSA1Q01976 231 aa2.29□□□□□ -2.04
SGD1YLR336C FCP1Q03254 732 aa2.29□□□□□ -2.04
SGD1YLR336C NUS1Q12063 375 aa2.29□□□□□ -2.04
SGD1YLR336C CHO1P08456 276 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms