RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	MNL1	P38888	796 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	IME4	P41833	600 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	YFR020W	P43600	232 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	YJR039W	P47107	1121 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	GLO1	P50107	326 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	YGR054W	P53235	642 aa	Known RBP	1.53	□□□□□ -2.16
YCS4	YLR272C	YIF1	P53845	314 aa	Known RBP	1.53	□□□□□ -2.16
YCS4	YLR272C	DAK1	P54838	584 aa	Known RBP	1.53	□□□□□ -2.16
YCS4	YLR272C	SSL2	Q00578	843 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	GCN5	Q03330	439 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	DCI1	Q08558	271 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	TGS1	Q12052	315 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	RTN2	Q12443	393 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	STE2	D6VTK4	431 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	PRP4	P20053	465 aa	Known RBP	1.53	□□□□□ -2.16
YCS4	YLR272C	JJJ1	P53863	590 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	PDS5	Q04264	1277 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	VPS38	Q05919	439 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	YKL033W-A	Q86ZR7	236 aa		1.53	□□□□□ -2.16
YCS4	YLR272C	HEM1	P09950	548 aa	Predicted RBP	1.53	□□□□□ -2.17
YCS4	YLR272C	HOM2	P13663	365 aa	Known RBP	1.53	□□□□□ -2.17
YCS4	YLR272C	CKA1	P15790	372 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	SIR1	P21691	654 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	RNQ1	P25367	405 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	AUR1	P36107	401 aa	Predicted RBP	1.53	□□□□□ -2.17
YCS4	YLR272C	DBP8	P38719	431 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	FAD1	P38913	306 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	BEM4	P39011	633 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	END3	P39013	349 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	ICP55	P40051	511 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	BIT61	P47041	543 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	MRX6	P48564	524 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	IMD4	P50094	524 aa	Known RBP	1.53	□□□□□ -2.17
YCS4	YLR272C	ASE1	P50275	885 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	MRPS35	P53292	345 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	BUD17	P53727	317 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	NGL2	Q03264	515 aa	Known RBP	1.53	□□□□□ -2.17
YCS4	YLR272C	YLL058W	Q12198	575 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	TIP41	Q12199	356 aa		1.53	□□□□□ -2.17
YCS4	YLR272C	NAT1	P12945	854 aa	Known RBP	1.52	□□□□□ -2.17
YCS4	YLR272C	SPO16	P17122	198 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	SGV1	P23293	657 aa	Known RBP	1.52	□□□□□ -2.17
YCS4	YLR272C	HCM1	P25364	564 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	XRS2	P33301	854 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	PMT1	P33775	817 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	LOT5	P34234	306 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	MUM2	P38236	366 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	MCX1	P38323	520 aa	Predicted RBP	1.52	□□□□□ -2.17
YCS4	YLR272C	ARO9	P38840	513 aa	Predicted RBP	1.52	□□□□□ -2.17
YCS4	YLR272C	LYS9	P38999	446 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	IES5	P40060	125 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	NDC80	P40460	691 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	INP52	P50942	1183 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	YGL138C	P53122	345 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	ARG5,6	Q01217	863 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	YML119W	Q03208	357 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	MCM21	Q06675	368 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	ESC8	Q08119	714 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	GPM3	Q12326	303 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	YML002W	P0CF17	737 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	URA4	P20051	364 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	YCR006C	P25350	157 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	CDC20	P26309	610 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	PRO3	P32263	286 aa	Known RBP	1.52	□□□□□ -2.17
YCS4	YLR272C	GDA1	P32621	518 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	ATG19	P35193	415 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	NUP60	P39705	539 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	ARG2	P40360	574 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	RSM23	Q01163	450 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	OAZ1	Q02803	292 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	MSS11	Q03825	758 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	ERB1	Q04660	807 aa	Known RBP	1.52	□□□□□ -2.17
YCS4	YLR272C	KEL3	Q08979	651 aa	Predicted RBP	1.52	□□□□□ -2.17
YCS4	YLR272C	TRM13	Q12383	476 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	TRM11	Q12463	433 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	YCR015C	P25616	317 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	BRF1	P29056	596 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	RSM22	P36056	628 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	GLG1	P36143	616 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	RPF2	P36160	344 aa	Known RBP	1.52	□□□□□ -2.17
YCS4	YLR272C	ESL2	P36168	1195 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	FTH1	P38310	465 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	BCD1	P38772	366 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	YGL036W	P53185	909 aa	Predicted RBP	1.52	□□□□□ -2.17
YCS4	YLR272C	YPL062W	Q02781	134 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	RBA50	Q04418	439 aa		1.52	□□□□□ -2.17
YCS4	YLR272C	LPX1	Q12405	387 aa	Known RBP	1.52	□□□□□ -2.17
YCS4	YLR272C	MF(ALPHA)1	P01149	165 aa		1.51	□□□□□ -2.17
YCS4	YLR272C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	1.51	□□□□□ -2.17	not detected
YCS4	YLR272C	CDC26	P14724	124 aa		1.51	□□□□□ -2.17
YCS4	YLR272C	SPO7	P18410	259 aa		1.51	□□□□□ -2.17
YCS4	YLR272C	YSR3	P23501	404 aa		1.51	□□□□□ -2.17
YCS4	YLR272C	ERG4	P25340	473 aa		1.51	□□□□□ -2.17
YCS4	YLR272C	PRE4	P30657	266 aa		1.51	□□□□□ -2.17
YCS4	YLR272C	YBR225W	P38321	900 aa		1.51	□□□□□ -2.17
YCS4	YLR272C	CTF8	P38877	133 aa		1.51	□□□□□ -2.17
YCS4	YLR272C	JEM1	P40358	645 aa		1.51	□□□□□ -2.17
YCS4	YLR272C	YIL089W	P40500	205 aa		1.51	□□□□□ -2.17
YCS4	YLR272C	RHO5	P53879	331 aa	Known RBP	1.51	□□□□□ -2.17
YCS4	YLR272C	ADE16	P54113	591 aa	Known RBP	1.51	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms