RNA–Protein interactions for RNA: YLR224W

YLR224W, Transcript of F-box protein and component of SCF ubiquitin ligase complexes, yeast

Gene YLR224W, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR224W	YLR224W	PWP2	P25635	923 aa	Known RBP	3.22	□□□□□ -1.89
YLR224W	YLR224W	MSS51	P32335	436 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	XRS2	P33301	854 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	VPS24	P36095	224 aa	Known RBP	3.22	□□□□□ -1.89
YLR224W	YLR224W	IES5	P40060	125 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	MNT3	P40549	630 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	SMK1	P41808	388 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	IRC8	P47046	822 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	MSY1	P48527	492 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	ORC5	P50874	479 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	COP1	P53622	1201 aa	Known RBP	3.22	□□□□□ -1.89
YLR224W	YLR224W	CSL4	P53859	292 aa	Predicted RBP	3.22	□□□□□ -1.89
YLR224W	YLR224W	ATG16	Q03818	150 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	STP3	Q05937	343 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	CSR1	Q06705	408 aa	Known RBP	3.22	□□□□□ -1.89
YLR224W	YLR224W	PSR2	Q07949	397 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	PFA4	Q12006	378 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	SWT1	Q12104	458 aa		3.22	□□□□□ -1.89
YLR224W	YLR224W	ATP2	P00830	511 aa	Known RBP	3.21	□□□□□ -1.9
YLR224W	YLR224W	TPK1	P06244	397 aa		3.21	□□□□□ -1.9
YLR224W	YLR224W	YML003W	P0CF16	290 aa		3.21	□□□□□ -1.9
YLR224W	YLR224W	RFA2	P26754	273 aa	Known RBP	3.21	□□□□□ -1.9
YLR224W	YLR224W	RAD16	P31244	790 aa		3.21	□□□□□ -1.9
YLR224W	YLR224W	EXO84	P38261	753 aa		3.21	□□□□□ -1.9
YLR224W	YLR224W	JHD1	P40034	492 aa		3.21	□□□□□ -1.9
YLR224W	YLR224W	YIL024C	P40543	189 aa		3.21	□□□□□ -1.9
YLR224W	YLR224W	CFD1	P40558	293 aa		3.21	□□□□□ -1.9
YLR224W	YLR224W	ASE1	P50275	885 aa		3.21	□□□□□ -1.9
YLR224W	YLR224W	VTC3	Q02725	835 aa		3.21	□□□□□ -1.9
YLR224W	YLR224W	YPT1	P01123	206 aa	Known RBP	3.2	□□□□□ -1.9
YLR224W	YLR224W	YER190C-B	P0CX94	160 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	YEL077W-A	P0CX95	160 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	YGR296C-B	P0CX96	160 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	YPL283W-B	P0CX97	160 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	YPR204C-A	P0CX98	160 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	PCT1	P13259	424 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	IFA38	P38286	347 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	FLO5	P38894	1075 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	ASG1	P40467	964 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	YJL107C	P42947	387 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	CTF18	P49956	741 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	DCP2	P53550	970 aa	Known RBP	3.2	□□□□□ -1.9
YLR224W	YLR224W	ADE16	P54113	591 aa	Known RBP	3.2	□□□□□ -1.9
YLR224W	YLR224W	TFC6	Q06339	672 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	COX17	Q12287	69 aa		3.2	□□□□□ -1.9
YLR224W	YLR224W	SUI3	P09064	285 aa	Known RBP	3.19	□□□□□ -1.9
YLR224W	YLR224W	TY2A-LR1	P0C2J4	438 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	TY2A-F	P0CX61	438 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	TY2A-GR2	P0CX62	438 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	TY2A-C	P25383	438 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	GEX2	P36173	615 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	PSY4	P38193	441 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	FUI1	P38196	639 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	ARN1	P38731	627 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	TOM71	P38825	639 aa	Known RBP	3.19	□□□□□ -1.9
YLR224W	YLR224W	SPC97	P38863	823 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	TPA1	P40032	644 aa	Known RBP	3.19	□□□□□ -1.9
YLR224W	YLR224W	IST3	P40565	148 aa	Predicted RBP	3.19	□□□□□ -1.9
YLR224W	YLR224W	CDC1	P40986	491 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	COG1	P53079	417 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	SCW4	P53334	386 aa	Known RBP	3.19	□□□□□ -1.9
YLR224W	YLR224W	YPR003C	P53394	754 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	GTR1	Q00582	310 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	TY2A-DR2	Q03483	438 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	SWA2	Q06677	668 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	TY2A-B	Q12260	438 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	HER1	Q12276	1246 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	TY2A-OR2	Q12293	438 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	TY2A-DR1	Q12392	438 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	TY2A-OR1	Q12439	438 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	TY2A-DR3	Q99303	438 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	SSM4	P40318	1319 aa		3.19	□□□□□ -1.9
YLR224W	YLR224W	MRP2	P10663	115 aa	Predicted RBP	3.18	□□□□□ -1.9
YLR224W	YLR224W	YSP3	P25036	478 aa		3.18	□□□□□ -1.9
YLR224W	YLR224W	RPT3	P33298	428 aa	Known RBP	3.18	□□□□□ -1.9
YLR224W	YLR224W	OCT1	P35999	772 aa		3.18	□□□□□ -1.9
YLR224W	YLR224W	TEF4	P36008	412 aa	Known RBP	3.18	□□□□□ -1.9
YLR224W	YLR224W	UME6	P39001	836 aa		3.18	□□□□□ -1.9
YLR224W	YLR224W	YMR124W	P39523	943 aa	Known RBP	3.18	□□□□□ -1.9
YLR224W	YLR224W	PCI8	P40512	444 aa		3.18	□□□□□ -1.9
YLR224W	YLR224W	PSP1	P50896	841 aa	Known RBP	3.18	□□□□□ -1.9
YLR224W	YLR224W	YGR021W	P53212	290 aa		3.18	□□□□□ -1.9
YLR224W	YLR224W	RRI1	Q12468	440 aa		3.18	□□□□□ -1.9
YLR224W	YLR224W	YPR089W	O13585	888 aa		3.17	□□□□□ -1.9
YLR224W	YLR224W	CNA1	P23287	553 aa		3.17	□□□□□ -1.9
YLR224W	YLR224W	TFC3	P34111	1160 aa		3.17	□□□□□ -1.9
YLR224W	YLR224W	ASK1	P35734	292 aa		3.17	□□□□□ -1.9
YLR224W	YLR224W	YNL144C	P53907	740 aa		3.17	□□□□□ -1.9
YLR224W	YLR224W	MRPL1	Q04599	285 aa		3.17	□□□□□ -1.9
YLR224W	YLR224W	PDR8	Q06149	701 aa		3.17	□□□□□ -1.9
YLR224W	YLR224W	MCH4	Q08268	501 aa		3.17	□□□□□ -1.9
YLR224W	YLR224W	TMA16	Q08687	178 aa		3.17	□□□□□ -1.9
YLR224W	YLR224W	ERG27	Q12452	347 aa	Known RBP	3.17	□□□□□ -1.9
YLR224W	YLR224W	PCD1	Q12524	340 aa		3.17	□□□□□ -1.9
YLR224W	YLR224W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
YLR224W	YLR224W	DPB3	P27344	201 aa		3.16	□□□□□ -1.9
YLR224W	YLR224W	RGT1	P32862	1170 aa		3.16	□□□□□ -1.9
YLR224W	YLR224W	CNS1	P33313	385 aa		3.16	□□□□□ -1.9
YLR224W	YLR224W	LHS1	P36016	881 aa		3.16	□□□□□ -1.9
YLR224W	YLR224W	PXL1	P36166	706 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms