RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C LYS20P48570 428 aaKnown RBP3.14□□□□□ -1.91
AFB1YLR040C YRB30P53107 440 aaPredicted RBP3.14□□□□□ -1.91
AFB1YLR040C TRS130Q03660 1102 aa3.14□□□□□ -1.91
AFB1YLR040C MRPL1Q04599 285 aa3.14□□□□□ -1.91
AFB1YLR040C YER145C-AA0A023PYF4 145 aa3.13□□□□□ -1.91
AFB1YLR040C YCR006CP25350 157 aa3.13□□□□□ -1.91
AFB1YLR040C MSS51P32335 436 aa3.13□□□□□ -1.91
AFB1YLR040C GCD7P32502 381 aaPredicted RBP3.13□□□□□ -1.91
AFB1YLR040C PXL1P36166 706 aa3.13□□□□□ -1.91
AFB1YLR040C EAF7P53911 425 aaKnown RBP3.13□□□□□ -1.91
AFB1YLR040C VAM6Q07468 1049 aa3.13□□□□□ -1.91
AFB1YLR040C PCD1Q12524 340 aa3.13□□□□□ -1.91
AFB1YLR040C OCT1P35999 772 aa3.12□□□□□ -1.91
AFB1YLR040C TOM71P38825 639 aaKnown RBP3.12□□□□□ -1.91
AFB1YLR040C TPA1P40032 644 aaKnown RBP3.12□□□□□ -1.91
AFB1YLR040C DJP1P40564 432 aa3.12□□□□□ -1.91
AFB1YLR040C ERR3P42222 437 aa3.12□□□□□ -1.91
AFB1YLR040C MDV1P47025 714 aa3.12□□□□□ -1.91
AFB1YLR040C YPT11P48559 417 aa3.12□□□□□ -1.91
AFB1YLR040C TDA9Q04545 1251 aa3.12□□□□□ -1.91
AFB1YLR040C PIG1Q06216 648 aa3.12□□□□□ -1.91
AFB1YLR040C FRE3Q08905 711 aa3.12□□□□□ -1.91
AFB1YLR040C BAG7Q12128 409 aa3.12□□□□□ -1.91
AFB1YLR040C PHO81P17442 1178 aa3.11□□□□□ -1.91
AFB1YLR040C MSM1P22438 575 aa3.11□□□□□ -1.91
AFB1YLR040C LRE1P25579 583 aaKnown RBP3.11□□□□□ -1.91
AFB1YLR040C SCO2P38072 301 aa3.11□□□□□ -1.91
AFB1YLR040C UBP13P38187 747 aa3.11□□□□□ -1.91
AFB1YLR040C YGL036WP53185 909 aaPredicted RBP3.11□□□□□ -1.91
AFB1YLR040C ARC35P53731 342 aaKnown RBP3.11□□□□□ -1.91
AFB1YLR040C UBX4P54730 416 aa3.11□□□□□ -1.91
AFB1YLR040C VTC3Q02725 835 aa3.11□□□□□ -1.91
AFB1YLR040C ATG23Q06671 453 aa3.11□□□□□ -1.91
AFB1YLR040C SNA4Q07549 140 aa3.11□□□□□ -1.91
AFB1YLR040C MCH4Q08268 501 aa3.11□□□□□ -1.91
AFB1YLR040C SWT1Q12104 458 aa3.11□□□□□ -1.91
AFB1YLR040C YLR112WQ12130 139 aa3.11□□□□□ -1.91
AFB1YLR040C ATP2P00830 511 aaKnown RBP3.1□□□□□ -1.91
AFB1YLR040C NUC1P08466 329 aa3.1□□□□□ -1.91
AFB1YLR040C GPA1P08539 472 aa3.1□□□□□ -1.91
AFB1YLR040C SUI3P09064 285 aaKnown RBP3.1□□□□□ -1.91
AFB1YLR040C RPL42AP0CX27 106 aaKnown RBP3.1□□□□□ -1.91
AFB1YLR040C RPL42BP0CX28 106 aaKnown RBP3.1□□□□□ -1.91
AFB1YLR040C PGI1P12709 554 aaKnown RBP3.1□□□□□ -1.91
AFB1YLR040C SRP54P20424 541 aaKnown RBP3.1□□□□□ -1.91
AFB1YLR040C ATO2P32907 282 aa3.1□□□□□ -1.91
AFB1YLR040C ADE17P38009 592 aaKnown RBP3.1□□□□□ -1.91
AFB1YLR040C PHM8P40025 321 aa3.1□□□□□ -1.91
AFB1YLR040C YIR016WP40572 265 aa3.1□□□□□ -1.91
AFB1YLR040C YNL144CP53907 740 aa3.1□□□□□ -1.91
AFB1YLR040C SRL1Q08673 210 aa3.1□□□□□ -1.91
AFB1YLR040C UBX3Q12229 455 aa3.1□□□□□ -1.91
AFB1YLR040C COX17Q12287 69 aa3.1□□□□□ -1.91
AFB1YLR040C CHO1P08456 276 aa3.09□□□□□ -1.91
AFB1YLR040C YCL049CP25577 312 aa3.09□□□□□ -1.91
AFB1YLR040C DBF20P32328 564 aa3.09□□□□□ -1.91
AFB1YLR040C IFA38P38286 347 aa3.09□□□□□ -1.91
AFB1YLR040C PSF2P40359 213 aa3.09□□□□□ -1.91
AFB1YLR040C YIL152WP40455 235 aa3.09□□□□□ -1.91
AFB1YLR040C FAF1P40546 346 aaPredicted RBP3.09□□□□□ -1.91
AFB1YLR040C SCS3P53012 380 aa3.09□□□□□ -1.91
AFB1YLR040C LSC1P53598 329 aaKnown RBP3.09□□□□□ -1.91
AFB1YLR040C PAP2P53632 584 aaKnown RBP3.09□□□□□ -1.91
AFB1YLR040C CSL4P53859 292 aaPredicted RBP3.09□□□□□ -1.91
AFB1YLR040C SWA2Q06677 668 aa3.09□□□□□ -1.91
AFB1YLR040C GSH2Q08220 491 aa3.09□□□□□ -1.91
AFB1YLR040C PET111P08468 800 aa3.08□□□□□ -1.92
AFB1YLR040C MRP2P10663 115 aaPredicted RBP3.08□□□□□ -1.92
AFB1YLR040C YCR043CP25361 127 aa3.08□□□□□ -1.92
AFB1YLR040C NPR3P38742 1146 aa3.08□□□□□ -1.92
AFB1YLR040C YIL161WP40449 235 aaKnown RBP3.08□□□□□ -1.92
AFB1YLR040C ASG1P40467 964 aa3.08□□□□□ -1.92
AFB1YLR040C MEP2P41948 499 aa3.08□□□□□ -1.92
AFB1YLR040C YJR008WP47085 338 aa3.08□□□□□ -1.92
AFB1YLR040C BOP3P53958 396 aa3.08□□□□□ -1.92
AFB1YLR040C MRPL13Q02204 264 aa3.08□□□□□ -1.92
AFB1YLR040C YMR034CQ05131 434 aaPredicted RBP3.08□□□□□ -1.92
AFB1YLR040C YLR455WQ06188 304 aa3.08□□□□□ -1.92
AFB1YLR040C TFC6Q06339 672 aa3.08□□□□□ -1.92
AFB1YLR040C TMA16Q08687 178 aa3.08□□□□□ -1.92
AFB1YLR040C YFL068WP0CX99 160 aa3.07□□□□□ -1.92
AFB1YLR040C YLL066W-AP0CY00 160 aa3.07□□□□□ -1.92
AFB1YLR040C YLL067W-AP0CY01 160 aa3.07□□□□□ -1.92
AFB1YLR040C MTF2P10849 440 aa3.07□□□□□ -1.92
AFB1YLR040C UBC1P21734 215 aaKnown RBP3.07□□□□□ -1.92
AFB1YLR040C YUR1P26725 428 aa3.07□□□□□ -1.92
AFB1YLR040C SWP82P43554 623 aa3.07□□□□□ -1.92
AFB1YLR040C UBP8P50102 471 aa3.07□□□□□ -1.92
AFB1YLR040C COG1P53079 417 aa3.07□□□□□ -1.92
AFB1YLR040C RRT6P53117 311 aaPredicted RBP3.07□□□□□ -1.92
AFB1YLR040C DCP2P53550 970 aaKnown RBP3.07□□□□□ -1.92
AFB1YLR040C ASI1P54074 624 aa3.07□□□□□ -1.92
AFB1YLR040C BLS1Q06071 122 aa3.07□□□□□ -1.92
AFB1YLR040C CRN1Q06440 651 aa3.07□□□□□ -1.92
AFB1YLR040C POS5Q06892 414 aa3.07□□□□□ -1.92
AFB1YLR040C BUD7Q08754 746 aa3.07□□□□□ -1.92
AFB1YLR040C TY2A-LR1P0C2J4 438 aa3.06□□□□□ -1.92
AFB1YLR040C TY2A-FP0CX61 438 aa3.06□□□□□ -1.92
AFB1YLR040C TY2A-GR2P0CX62 438 aa3.06□□□□□ -1.92
AFB1YLR040C SPO16P17122 198 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms