RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	ADF1	Q2V2Q1	113 aa		4.99	□□□□□ -1.61
DOA1	YKL213C	CCP1	P00431	361 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	TUB3	P09734	445 aa	Known RBP	4.98	□□□□□ -1.61
DOA1	YKL213C	STE6	P12866	1290 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	YAP1	P19880	650 aa	Known RBP	4.98	□□□□□ -1.61
DOA1	YKL213C	DAL1	P32375	460 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	TFB1	P32776	642 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	VPS51	P36116	164 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
DOA1	YKL213C	YBR225W	P38321	900 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	MSR1	P38714	643 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	VAC8	P39968	578 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	BTT1	P40314	149 aa	Predicted RBP	4.98	□□□□□ -1.61
DOA1	YKL213C	CEP3	P40969	608 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	MPS2	P53159	387 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	YNL040W	P53960	456 aa	Predicted RBP	4.98	□□□□□ -1.61
DOA1	YKL213C	YMR187C	Q03236	431 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	GCN5	Q03330	439 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	RKM2	Q03942	479 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	SPG3	Q04398	127 aa	Predicted RBP	4.98	□□□□□ -1.61
DOA1	YKL213C	THI21	Q08975	551 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	AIM41	Q12032	185 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	CCH1	P50077	2039 aa		4.98	□□□□□ -1.61
DOA1	YKL213C	PEX34	P25584	144 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	MSH2	P25847	964 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	GCG1	P32656	232 aa	Known RBP	4.97	□□□□□ -1.61
DOA1	YKL213C	YKL063C	P35725	167 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	SFB3	P38810	929 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	CCT4	P39078	528 aa	Known RBP	4.97	□□□□□ -1.61
DOA1	YKL213C	MBP1	P39678	833 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	MDV1	P47025	714 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	SSN8	P47821	323 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	YML6	P51998	286 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	PEX31	P53203	462 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	UTP8	P53276	713 aa	Known RBP	4.97	□□□□□ -1.61
DOA1	YKL213C	MTG1	Q03151	367 aa	Predicted RBP	4.97	□□□□□ -1.61
DOA1	YKL213C	TDA9	Q04545	1251 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	AIM32	Q04689	311 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	THI7	Q05998	598 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	AAD4	Q07747	329 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	NDJ1	Q12366	352 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	ARP7	Q12406	477 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	TMA7	Q3E764	64 aa	Known RBP	4.97	□□□□□ -1.61
DOA1	YKL213C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
DOA1	YKL213C	RAD10	P06838	210 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	SIS1	P25294	352 aa	Known RBP	4.97	□□□□□ -1.61
DOA1	YKL213C	MEI4	P29467	408 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	VPH2	P32341	215 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	NIP1	P32497	812 aa	Known RBP	4.97	□□□□□ -1.61
DOA1	YKL213C	KAR9	P32526	644 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	DOM34	P33309	386 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	HSP78	P33416	811 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	HCS1	P34243	683 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	MMS21	P38632	267 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	SAK1	P38990	1142 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	ARG2	P40360	574 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	INA22	P40576	216 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	ALA1	P40825	983 aa	Known RBP	4.97	□□□□□ -1.61
DOA1	YKL213C	ROK1	P45818	564 aa	Predicted RBP	4.97	□□□□□ -1.61
DOA1	YKL213C	PSP1	P50896	841 aa	Known RBP	4.97	□□□□□ -1.61
DOA1	YKL213C	YGL140C	P53120	1219 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	KTR6	P54070	446 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	BET4	Q00618	327 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	LEE1	Q02799	301 aa	Known RBP	4.97	□□□□□ -1.61
DOA1	YKL213C	YMR102C	Q03177	834 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	ARP9	Q05123	467 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	VAM6	Q07468	1049 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	YDR018C	Q12185	396 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	LCB4	Q12246	624 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	SFI1	Q12369	946 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	RMP1	Q12530	201 aa		4.97	□□□□□ -1.61
DOA1	YKL213C	TOR2	P32600	2474 aa	Known RBP	4.96	□□□□□ -1.61
DOA1	YKL213C	MTF1	P14908	341 aa	Known RBP	4.96	□□□□□ -1.62
DOA1	YKL213C	MRPS28	P21771	286 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	MRPL8	P22353	238 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	YIH1	P25637	258 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	RPC34	P32910	317 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	ATP3	P38077	311 aa	Known RBP	4.96	□□□□□ -1.62
DOA1	YKL213C	ECM13	P38195	257 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	ARP1	P38696	384 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	CRP1	P38845	465 aa	Known RBP	4.96	□□□□□ -1.62
DOA1	YKL213C	NUP60	P39705	539 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	FLC2	P39719	783 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	LSB6	P42951	607 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	YFL066C	P43538	392 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	ORM1	P53224	222 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	RPM2	Q02773	1202 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	YKU80	Q04437	629 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	ATG23	Q06671	453 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	YPQ1	Q12010	308 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	ACF2	Q12168	779 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	IZH4	Q99393	312 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	PBS2	P08018	668 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	ILS1	P09436	1072 aa	Known RBP	4.96	□□□□□ -1.62
DOA1	YKL213C	SLY1	P22213	666 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	SGF29	P25554	259 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	ISF1	P32488	338 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	CUE2	P36075	443 aa	Known RBP	4.96	□□□□□ -1.62
DOA1	YKL213C	PEX32	P38292	413 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	MSG5	P38590	489 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms