RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKT6	YKL196C	RPS21A	P0C0V8	87 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	MSS116	P15424	664 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	OM45	P16547	393 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	TUP1	P16649	713 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	YAP1	P19880	650 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	TRX1	P22217	103 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	MRPL8	P22353	238 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	SAT4	P25333	603 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	CDC10	P25342	322 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	RPC53	P25441	422 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	NTH1	P32356	751 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	ASF2	P32448	525 aa	Predicted RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	EUG1	P32474	517 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	RPN2	P32565	945 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	SRB4	P32569	687 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	SSE1	P32589	693 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	YEL043W	P32618	956 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	RIB7	P33312	244 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	YKT6	P36015	200 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	KEL1	P38853	1164 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	SEC31	P38968	1273 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	YHB1	P39676	399 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	MDV1	P47025	714 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	SNX4	P47057	423 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	GPG1	P53130	126 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	FYV6	P53913	173 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	FMP30	Q02883	468 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	NSE5	Q03718	556 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	TRS23	Q03784	219 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	IVY1	Q04934	453 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	TRM8	Q12009	286 aa		3.58	□□□□□ -1.84
YKT6	YKL196C	RRP6	Q12149	733 aa	Known RBP	3.58	□□□□□ -1.84
YKT6	YKL196C	CTT1	P06115	562 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	TPK2	P06245	380 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	CDC16	P09798	840 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	MRP7	P12687	371 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	STE4	P18851	423 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	OCA4	P25366	362 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	PLC1	P32383	869 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	TFB1	P32776	642 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	OAF3	P36023	863 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	MAK5	P38112	773 aa	Predicted RBP	3.57	□□□□□ -1.84
YKT6	YKL196C	CDS1	P38221	457 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	YBR138C	P38277	524 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	CRG1	P38892	291 aa	RIP-Chip data	3.57	□□□□□ -1.84	not detected
YKT6	YKL196C	DUN1	P39009	513 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	AIM10	P39965	576 aa	Known RBP	3.57	□□□□□ -1.84
YKT6	YKL196C	SEC28	P40509	296 aa	Known RBP	3.57	□□□□□ -1.84
YKT6	YKL196C	PKP1	P40530	394 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	MNT3	P40549	630 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	GPD2	P41911	440 aa	Known RBP	3.57	□□□□□ -1.84
YKT6	YKL196C	ZIM17	P42844	174 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	YJL055W	P47044	245 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	MPS2	P53159	387 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	LSB1	P53281	241 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	RET3	P53600	189 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	YNR029C	P53729	429 aa	Known RBP	3.57	□□□□□ -1.84
YKT6	YKL196C	ERV25	P54837	211 aa	Known RBP	3.57	□□□□□ -1.84
YKT6	YKL196C	SEC5	P89102	971 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	CEG1	Q01159	459 aa	Predicted RBP	3.57	□□□□□ -1.84
YKT6	YKL196C	EGD1	Q02642	157 aa	Known RBP	3.57	□□□□□ -1.84
YKT6	YKL196C	YML108W	Q03759	105 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	YHM2	Q04013	314 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	EIS1	Q05050	843 aa	Known RBP	3.57	□□□□□ -1.84
YKT6	YKL196C	MCP2	Q06567	569 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	DNL4	Q08387	944 aa	Predicted RBP	3.57	□□□□□ -1.84
YKT6	YKL196C	NEW1	Q08972	1196 aa	Known RBP	3.57	□□□□□ -1.84
YKT6	YKL196C	BUG1	Q12191	341 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	SFI1	Q12369	946 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	YOL087C	Q99247	1116 aa		3.57	□□□□□ -1.84
YKT6	YKL196C	YRF1-4	O13559	1382 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	YML133C	Q03099	1374 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	CFT1	Q06632	1357 aa	Known RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	YLL067C	Q07888	1374 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	YLL066C	Q99208	1374 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	CDC37	P06101	506 aa	Known RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	HEM1	P09950	548 aa	Predicted RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	SSC1	P0CS90	654 aa	Known RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	ERG11	P10614	530 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	PRP22	P24384	1145 aa	Known RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	SPB1	P25582	841 aa	Predicted RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	YJU2	P28320	278 aa	Predicted RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	BMH1	P29311	267 aa	Known RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	MEI4	P29467	408 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	PRE4	P30657	266 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	RAD16	P31244	790 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	TPS2	P31688	896 aa	Known RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	NPL6	P32832	435 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	ORC2	P32833	620 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	UGP1	P32861	499 aa	Known RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	RPC34	P32910	317 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	LHS1	P36016	881 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	ATP3	P38077	311 aa	Known RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	RTC3	P38804	111 aa	Predicted RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	RTS1	P38903	757 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	STN1	P38960	494 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	VPS8	P39702	1274 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	OAF1	P39720	1047 aa	Predicted RBP	3.56	□□□□□ -1.84
YKT6	YKL196C	YIR014W	P40570	242 aa		3.56	□□□□□ -1.84
YKT6	YKL196C	EPL1	P43572	832 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms