RNA–Protein interactions for RNA: YKL078W

DHR2, Transcript of Predominantly nucleolar DEAH-box ATP-dependent RNA helicase, yeast

Gene DHR2, Length 2,208 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DHR2	YKL078W	NPL6	P32832	435 aa		4.23	□□□□□ -1.73
DHR2	YKL078W	HIS7	P33734	552 aa	Known RBP	4.23	□□□□□ -1.73
DHR2	YKL078W	TOD6	P34219	525 aa		4.23	□□□□□ -1.73
DHR2	YKL078W	PHO11	P35842	467 aa		4.23	□□□□□ -1.73
DHR2	YKL078W	PHO12	P38693	467 aa		4.23	□□□□□ -1.73
DHR2	YKL078W	YJL206C	P39529	758 aa		4.23	□□□□□ -1.73
DHR2	YKL078W	SMC3	P47037	1230 aa		4.23	□□□□□ -1.73
DHR2	YKL078W	OCA1	P50946	238 aa	Predicted RBP	4.23	□□□□□ -1.73
DHR2	YKL078W	MTG1	Q03151	367 aa	Predicted RBP	4.23	□□□□□ -1.73
DHR2	YKL078W	EFR3	Q03653	782 aa	Known RBP	4.23	□□□□□ -1.73
DHR2	YKL078W	ATG23	Q06671	453 aa		4.23	□□□□□ -1.73
DHR2	YKL078W	IRC13	Q08630	104 aa		4.23	□□□□□ -1.73
DHR2	YKL078W	HUA2	Q12134	243 aa		4.23	□□□□□ -1.73
DHR2	YKL078W	PDR11	P40550	1411 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	OLE1	P21147	510 aa	Known RBP	4.22	□□□□□ -1.73
DHR2	YKL078W	SGF29	P25554	259 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	MRP20	P32387	263 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	ESL2	P36168	1195 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	TDP1	P38319	544 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	SDH8	P38345	138 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
DHR2	YKL078W	YMR124W	P39523	943 aa	Known RBP	4.22	□□□□□ -1.73
DHR2	YKL078W	ARB1	P40024	610 aa	Known RBP	4.22	□□□□□ -1.73
DHR2	YKL078W	YIL161W	P40449	235 aa	Known RBP	4.22	□□□□□ -1.73
DHR2	YKL078W	LYS14	P40971	790 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	ARF3	P40994	183 aa	RIP-Chip data	4.22	□□□□□ -1.73	not detected
DHR2	YKL078W	THI6	P41835	540 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	BUL1	P48524	976 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	RGC1	Q06108	1083 aa	Known RBP	4.22	□□□□□ -1.73
DHR2	YKL078W	RRP9	Q06506	573 aa	Known RBP	4.22	□□□□□ -1.73
DHR2	YKL078W	NFI1	Q12216	726 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	PCD1	Q12524	340 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	YOR111W	Q99210	232 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	GCN4	P03069	281 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	PMA1	P05030	918 aa	Known RBP	4.22	□□□□□ -1.73
DHR2	YKL078W	ERG4	P25340	473 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	FUB1	P25659	250 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	EFT1	P32324	842 aa	Known RBP	4.22	□□□□□ -1.73
DHR2	YKL078W	MRPL7	P36519	292 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	UBP7	P40453	1071 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	RNT1	Q02555	471 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	USA1	Q03714	838 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	TAF11	Q04226	346 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	GGA1	Q06336	557 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	VIP1	Q06685	1146 aa	Known RBP	4.22	□□□□□ -1.73
DHR2	YKL078W	GLE1	Q12315	538 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	YBR255C-A	Q3E776	120 aa		4.22	□□□□□ -1.73
DHR2	YKL078W	TUB2	P02557	457 aa	Known RBP	4.21	□□□□□ -1.74
DHR2	YKL078W	SEC53	P07283	254 aa	Known RBP	4.21	□□□□□ -1.74
DHR2	YKL078W	PDE1	P22434	369 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	RPL5	P26321	297 aa	Known RBP	4.21	□□□□□ -1.74
DHR2	YKL078W	BLI1	P35727	113 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	BYE1	P36106	594 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	YNL058C	P53947	316 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	DAK1	P54838	584 aa	Known RBP	4.21	□□□□□ -1.74
DHR2	YKL078W	RRB1	Q04225	511 aa	Known RBP	4.21	□□□□□ -1.74
DHR2	YKL078W	CRF1	Q04930	467 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	HEL2	Q05580	639 aa	Known RBP	4.21	□□□□□ -1.74
DHR2	YKL078W	YDL086W	Q07505	273 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	GCN2	P15442	1659 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	THR1	P17423	357 aa	Known RBP	4.21	□□□□□ -1.74
DHR2	YKL078W	TFC3	P34111	1160 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	MAC1	P35192	417 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	YKL050C	P35736	922 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	APL3	P38065	1025 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	YBL029W	P38201	376 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	YBR225W	P38321	900 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	PES4	P39684	611 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	AAD10	P47182	288 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	GTB1	Q04924	702 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	AIM39	Q08223	395 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	SFI1	Q12369	946 aa		4.21	□□□□□ -1.74
DHR2	YKL078W	NOP58	Q12499	511 aa	Known RBP	4.21	□□□□□ -1.74
DHR2	YKL078W	HSH49	Q99181	213 aa	Predicted RBP	4.21	□□□□□ -1.74
DHR2	YKL078W	FUR1	P18562	216 aa	Known RBP	4.2	□□□□□ -1.74
DHR2	YKL078W	PUP2	P32379	260 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	LOT5	P34234	306 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	CCL1	P37366	393 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	RKM3	P38222	552 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	CIR1	P42940	261 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	HOS2	P53096	452 aa	Predicted RBP	4.2	□□□□□ -1.74
DHR2	YKL078W	DUO1	P53168	247 aa	Known RBP	4.2	□□□□□ -1.74
DHR2	YKL078W	RIA1	P53893	1110 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	UFO1	Q04511	668 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	TGS1	Q12052	315 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	MLH3	Q12083	715 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	SWT1	Q12104	458 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	YBR126W-A	Q8TGU7	68 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	VCX1	Q99385	411 aa		4.2	□□□□□ -1.74
DHR2	YKL078W	CFT1	Q06632	1357 aa	Known RBP	4.2	□□□□□ -1.74
DHR2	YKL078W	LRE1	P25579	583 aa	Known RBP	4.19	□□□□□ -1.74
DHR2	YKL078W	URK1	P27515	501 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	LNP1	P38878	278 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
DHR2	YKL078W	FLC2	P39719	783 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	TAM41	P53230	385 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	YGR151C	P53287	111 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	REG1	Q00816	1014 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	YSA1	Q01976	231 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	MUB1	Q03162	620 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms