RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W RFA2P26754 273 aaKnown RBP6.05□□□□□ -1.44
PRP40YKL012W SPO22P40511 975 aa6.05□□□□□ -1.44
PRP40YKL012W IME4P41833 600 aa6.05□□□□□ -1.44
PRP40YKL012W AVT1P47082 602 aa6.05□□□□□ -1.44
PRP40YKL012W YML119WQ03208 357 aa6.05□□□□□ -1.44
PRP40YKL012W YDR179W-AQ03983 463 aa6.05□□□□□ -1.44
PRP40YKL012W CRT10Q08226 957 aa6.05□□□□□ -1.44
PRP40YKL012W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
PRP40YKL012W MET17P06106 444 aa6.04□□□□□ -1.44
PRP40YKL012W BLI1P35727 113 aa6.04□□□□□ -1.44
PRP40YKL012W YKL050CP35736 922 aa6.04□□□□□ -1.44
PRP40YKL012W JHD1P40034 492 aa6.04□□□□□ -1.44
PRP40YKL012W GPD2P41911 440 aaKnown RBP6.04□□□□□ -1.44
PRP40YKL012W UBP16Q02863 499 aa6.04□□□□□ -1.44
PRP40YKL012W BAG7Q12128 409 aa6.04□□□□□ -1.44
PRP40YKL012W CHO2P05374 869 aaKnown RBP6.03□□□□□ -1.44
PRP40YKL012W HOM3P10869 527 aa6.03□□□□□ -1.44
PRP40YKL012W ROX1P25042 368 aa6.03□□□□□ -1.44
PRP40YKL012W OCA4P25366 362 aa6.03□□□□□ -1.44
PRP40YKL012W ERG3P32353 365 aa6.03□□□□□ -1.44
PRP40YKL012W SIP1P32578 815 aa6.03□□□□□ -1.44
PRP40YKL012W GLG1P36143 616 aa6.03□□□□□ -1.44
PRP40YKL012W FUN12P39730 1002 aaKnown RBP6.03□□□□□ -1.44
PRP40YKL012W NPA3P47122 385 aa6.03□□□□□ -1.44
PRP40YKL012W RSC1P53236 928 aa6.03□□□□□ -1.44
PRP40YKL012W SKG3Q06315 1026 aa6.03□□□□□ -1.44
PRP40YKL012W URN1Q06525 465 aaKnown RBP6.03□□□□□ -1.44
PRP40YKL012W LYS21Q12122 440 aaKnown RBP6.03□□□□□ -1.44
PRP40YKL012W CDC15P27636 974 aa6.03□□□□□ -1.44
PRP40YKL012W PEP3P27801 918 aa6.03□□□□□ -1.44
PRP40YKL012W HES1P35843 434 aa6.03□□□□□ -1.44
PRP40YKL012W RPF2P36160 344 aaKnown RBP6.03□□□□□ -1.44
PRP40YKL012W LAS21P40367 830 aa6.03□□□□□ -1.44
PRP40YKL012W KIN4Q01919 800 aa6.03□□□□□ -1.44
PRP40YKL012W SFI1Q12369 946 aa6.03□□□□□ -1.44
PRP40YKL012W COX1P00401 534 aa6.02□□□□□ -1.45
PRP40YKL012W CBS1P14066 229 aa6.02□□□□□ -1.45
PRP40YKL012W AUR1P36107 401 aaPredicted RBP6.02□□□□□ -1.45
PRP40YKL012W ERC1P38767 581 aa6.02□□□□□ -1.45
PRP40YKL012W GRC3Q07845 632 aa6.02□□□□□ -1.45
PRP40YKL012W ESC8Q08119 714 aa6.02□□□□□ -1.45
PRP40YKL012W TCO89Q08921 799 aa6.02□□□□□ -1.45
PRP40YKL012W AI5_ALPHAQ9ZZX1 630 aa6.02□□□□□ -1.45
PRP40YKL012W YBR085C-AO43137 85 aa6.01□□□□□ -1.45
PRP40YKL012W WHI2P12611 486 aa6.01□□□□□ -1.45
PRP40YKL012W RNR3P21672 869 aaKnown RBP6.01□□□□□ -1.45
PRP40YKL012W YSP3P25036 478 aa6.01□□□□□ -1.45
PRP40YKL012W LCB1P25045 558 aaKnown RBP6.01□□□□□ -1.45
PRP40YKL012W VMA8P32610 256 aaKnown RBP6.01□□□□□ -1.45
PRP40YKL012W MTH1P35198 433 aa6.01□□□□□ -1.45
PRP40YKL012W BYE1P36106 594 aa6.01□□□□□ -1.45
PRP40YKL012W MAL33P38157 468 aa6.01□□□□□ -1.45
PRP40YKL012W UBP13P38187 747 aa6.01□□□□□ -1.45
PRP40YKL012W MTG2P38860 518 aa6.01□□□□□ -1.45
PRP40YKL012W BDH2P39713 417 aa6.01□□□□□ -1.45
PRP40YKL012W LSM5P40089 93 aaKnown RBP6.01□□□□□ -1.45
PRP40YKL012W AXL1P40851 1208 aa6.01□□□□□ -1.45
PRP40YKL012W MSY1P48527 492 aa6.01□□□□□ -1.45
PRP40YKL012W GLO1P50107 326 aa6.01□□□□□ -1.45
PRP40YKL012W YGL036WP53185 909 aaPredicted RBP6.01□□□□□ -1.45
PRP40YKL012W COQ6P53318 479 aa6.01□□□□□ -1.45
PRP40YKL012W GPN2Q08726 347 aaPredicted RBP6.01□□□□□ -1.45
PRP40YKL012W LCB4Q12246 624 aa6.01□□□□□ -1.45
PRP40YKL012W ZPS1Q12512 249 aa6.01□□□□□ -1.45
PRP40YKL012W RGI2P40188 164 aa6.01□□□□□ -1.45
PRP40YKL012W SEC24P40482 926 aaKnown RBP6.01□□□□□ -1.45
PRP40YKL012W UBX6P47049 396 aa6.01□□□□□ -1.45
PRP40YKL012W MSE1P48525 536 aa6.01□□□□□ -1.45
PRP40YKL012W YGR250CP53316 781 aaKnown RBP6.01□□□□□ -1.45
PRP40YKL012W INA17Q02888 182 aa6.01□□□□□ -1.45
PRP40YKL012W CRN1Q06440 651 aa6.01□□□□□ -1.45
PRP40YKL012W RTN2Q12443 393 aa6.01□□□□□ -1.45
PRP40YKL012W Q0010Q9ZZX9 128 aa6.01□□□□□ -1.45
PRP40YKL012W RPC53P25441 422 aa6□□□□□ -1.45
PRP40YKL012W POL4P25615 582 aa6□□□□□ -1.45
PRP40YKL012W GDA1P32621 518 aa6□□□□□ -1.45
PRP40YKL012W TRM2P33753 639 aa6□□□□□ -1.45
PRP40YKL012W DCP2P53550 970 aaKnown RBP6□□□□□ -1.45
PRP40YKL012W YMR206WQ03695 313 aa6□□□□□ -1.45
PRP40YKL012W YMR155WQ03795 547 aa6□□□□□ -1.45
PRP40YKL012W GFD1Q04839 188 aaKnown RBP6□□□□□ -1.45
PRP40YKL012W SPE4Q12455 300 aa6□□□□□ -1.45
PRP40YKL012W CPA2P03965 1118 aaKnown RBP5.99□□□□□ -1.45
PRP40YKL012W PXA2P34230 853 aa5.99□□□□□ -1.45
PRP40YKL012W SRO77P38163 1010 aa5.99□□□□□ -1.45
PRP40YKL012W SWP82P43554 623 aa5.99□□□□□ -1.45
PRP40YKL012W LYS4P49367 693 aaPredicted RBP5.99□□□□□ -1.45
PRP40YKL012W COG2P53271 262 aa5.99□□□□□ -1.45
PRP40YKL012W YAT1P80235 687 aa5.99□□□□□ -1.45
PRP40YKL012W YDR109CQ04585 715 aa5.99□□□□□ -1.45
PRP40YKL012W YML053CQ04978 212 aa5.99□□□□□ -1.45
PRP40YKL012W SWA2Q06677 668 aa5.99□□□□□ -1.45
PRP40YKL012W YPL191CQ08930 360 aa5.99□□□□□ -1.45
PRP40YKL012W MDM20Q12387 796 aaKnown RBP5.99□□□□□ -1.45
PRP40YKL012W PDX1P16451 410 aa5.98□□□□□ -1.45
PRP40YKL012W LAC1P28496 418 aa5.98□□□□□ -1.45
PRP40YKL012W PEX5P35056 612 aa5.98□□□□□ -1.45
PRP40YKL012W YMC2P38087 329 aa5.98□□□□□ -1.45
PRP40YKL012W YNG2P38806 282 aaKnown RBP5.98□□□□□ -1.45
PRP40YKL012W MIT1P40002 666 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms