RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeastyeast

Gene SOD1, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD1YJR104C YNR040WP53736 256 aa3.61□□□□□ -1.83
SOD1YJR104C RTC4P53850 401 aa3.61□□□□□ -1.83
SOD1YJR104C ELA1P53861 379 aaPredicted RBP3.61□□□□□ -1.83
SOD1YJR104C SNZ1Q03148 297 aa3.61□□□□□ -1.83
SOD1YJR104C YDR444WQ04093 687 aa3.61□□□□□ -1.83
SOD1YJR104C YMR114CQ04471 368 aaKnown RBP3.61□□□□□ -1.83
SOD1YJR104C YLR407WQ06070 228 aa3.61□□□□□ -1.83
SOD1YJR104C VIP1Q06685 1146 aaKnown RBP3.61□□□□□ -1.83
SOD1YJR104C YDL114WQ07530 308 aa3.61□□□□□ -1.83
SOD1YJR104C AFT2Q08957 416 aa3.61□□□□□ -1.83
SOD1YJR104C YPL277CQ08989 487 aa3.61□□□□□ -1.83
SOD1YJR104C YPL278CQ08990 100 aa3.61□□□□□ -1.83
SOD1YJR104C YOR289WQ12012 251 aaPredicted RBP3.61□□□□□ -1.83
SOD1YJR104C MED4Q12343 284 aa3.61□□□□□ -1.83
SOD1YJR104C YIL002W-AQ3E7Z5 69 aa3.61□□□□□ -1.83
SOD1YJR104C YOR111WQ99210 232 aa3.61□□□□□ -1.83
SOD1YJR104C SEC16P48415 2195 aaKnown RBP3.61□□□□□ -1.83
SOD1YJR104C SEM1O94742 89 aa3.6□□□□□ -1.83
SOD1YJR104C ILS1P09436 1072 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C MRP7P12687 371 aa3.6□□□□□ -1.83
SOD1YJR104C YAK1P14680 807 aa3.6□□□□□ -1.83
SOD1YJR104C GFA1P14742 717 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C RPC53P25441 422 aa3.6□□□□□ -1.83
SOD1YJR104C RPS5P26783 225 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C PEP3P27801 918 aa3.6□□□□□ -1.83
SOD1YJR104C MCM5P29496 775 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C RPT5P33297 434 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C GCS1P35197 352 aa3.6□□□□□ -1.83
SOD1YJR104C YET1P35723 206 aa3.6□□□□□ -1.83
SOD1YJR104C GLG1P36143 616 aa3.6□□□□□ -1.83
SOD1YJR104C YBR225WP38321 900 aa3.6□□□□□ -1.83
SOD1YJR104C RCK2P38623 610 aa3.6□□□□□ -1.83
SOD1YJR104C LSM12P38828 187 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C AST2P39945 430 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C VFA1P40080 203 aa3.6□□□□□ -1.83
SOD1YJR104C SMX2P40204 77 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C FAR7P43592 221 aa3.6□□□□□ -1.83
SOD1YJR104C ROG3P43602 733 aa3.6□□□□□ -1.83
SOD1YJR104C SRB7P47822 140 aa3.6□□□□□ -1.83
SOD1YJR104C TRF5P48561 642 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C IMD3P50095 523 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C ATP22P50273 684 aaPredicted RBP3.6□□□□□ -1.83
SOD1YJR104C NUT1P53114 1132 aa3.6□□□□□ -1.83
SOD1YJR104C CUE3P53137 624 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C MRPS35P53292 345 aa3.6□□□□□ -1.83
SOD1YJR104C TOF1P53840 1238 aa3.6□□□□□ -1.83
SOD1YJR104C IMP4P53941 290 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C PRO2P54885 456 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C SLU7Q02775 382 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C NOG1Q02892 647 aaKnown RBP3.6□□□□□ -1.83
SOD1YJR104C URC2Q04411 772 aa3.6□□□□□ -1.83
SOD1YJR104C SOV1Q04748 898 aa3.6□□□□□ -1.83
SOD1YJR104C ENT2Q05785 613 aa3.6□□□□□ -1.83
SOD1YJR104C RSC3Q06639 885 aa3.6□□□□□ -1.83
SOD1YJR104C YEH2Q07950 538 aa3.6□□□□□ -1.83
SOD1YJR104C YRM1Q12340 786 aa3.6□□□□□ -1.83
SOD1YJR104C ARP6Q12509 438 aa3.6□□□□□ -1.83
SOD1YJR104C IPP1P00817 287 aaKnown RBP3.59□□□□□ -1.83
SOD1YJR104C RIP1P08067 215 aa3.59□□□□□ -1.83
SOD1YJR104C SPE1P08432 466 aa3.59□□□□□ -1.83
SOD1YJR104C MPH2P0CD99 609 aa3.59□□□□□ -1.83
SOD1YJR104C KAR1P11927 433 aa3.59□□□□□ -1.83
SOD1YJR104C KIN2P13186 1147 aaKnown RBP3.59□□□□□ -1.83
SOD1YJR104C CMP2P14747 604 aa3.59□□□□□ -1.83
SOD1YJR104C STF2P16965 84 aa3.59□□□□□ -1.83
SOD1YJR104C HSP60P19882 572 aaKnown RBP3.59□□□□□ -1.83
SOD1YJR104C OCA4P25366 362 aa3.59□□□□□ -1.83
SOD1YJR104C SPB1P25582 841 aaPredicted RBP3.59□□□□□ -1.83
SOD1YJR104C POL4P25615 582 aa3.59□□□□□ -1.83
SOD1YJR104C MSS51P32335 436 aa3.59□□□□□ -1.83
SOD1YJR104C HXT3P32466 567 aaKnown RBP3.59□□□□□ -1.83
SOD1YJR104C CPR5P35176 225 aa3.59□□□□□ -1.83
SOD1YJR104C RFC3P38629 340 aa3.59□□□□□ -1.83
SOD1YJR104C SMC2P38989 1170 aaKnown RBP3.59□□□□□ -1.83
SOD1YJR104C CEM1P39525 442 aa3.59□□□□□ -1.83
SOD1YJR104C TMN3P40071 706 aa3.59□□□□□ -1.83
SOD1YJR104C AVT6P40074 448 aa3.59□□□□□ -1.83
SOD1YJR104C DIM1P41819 318 aaKnown RBP3.59□□□□□ -1.83
SOD1YJR104C YNL320WP42840 284 aa3.59□□□□□ -1.83
SOD1YJR104C DUG1P43616 481 aaKnown RBP3.59□□□□□ -1.83
SOD1YJR104C RPC17P47076 161 aa3.59□□□□□ -1.83
SOD1YJR104C BFA1P47113 574 aa3.59□□□□□ -1.83
SOD1YJR104C YGR237CP50089 785 aa3.59□□□□□ -1.83
SOD1YJR104C PSP1P50896 841 aaKnown RBP3.59□□□□□ -1.83
SOD1YJR104C PAN2P53010 1115 aaPredicted RBP3.59□□□□□ -1.83
SOD1YJR104C ZIP2P53061 704 aa3.59□□□□□ -1.83
SOD1YJR104C YGL108CP53139 140 aa3.59□□□□□ -1.83
SOD1YJR104C CUZ1P53899 274 aa3.59□□□□□ -1.83
SOD1YJR104C YNL040WP53960 456 aaPredicted RBP3.59□□□□□ -1.83
SOD1YJR104C NAM8Q00539 523 aaKnown RBP3.59□□□□□ -1.83
SOD1YJR104C RPT6Q01939 405 aaKnown RBP3.59□□□□□ -1.83
SOD1YJR104C MUK1Q02866 612 aa3.59□□□□□ -1.83
SOD1YJR104C ABZ2Q03266 374 aa3.59□□□□□ -1.83
SOD1YJR104C ADI1Q03677 179 aa3.59□□□□□ -1.83
SOD1YJR104C YDR239CQ03780 787 aa3.59□□□□□ -1.83
SOD1YJR104C GPI17Q04080 534 aa3.59□□□□□ -1.83
SOD1YJR104C ARP9Q05123 467 aa3.59□□□□□ -1.83
SOD1YJR104C DXO1Q06349 442 aa3.59□□□□□ -1.83
SOD1YJR104C YLR001CQ07895 862 aa3.59□□□□□ -1.83
SOD1YJR104C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms