RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C YPR003CP53394 754 aa4.38□□□□□ -1.71
CUP1-2YHR055C ECM22Q05958 814 aaPredicted RBP4.38□□□□□ -1.71
CUP1-2YHR055C PDR8Q06149 701 aa4.38□□□□□ -1.71
CUP1-2YHR055C ATP2P00830 511 aaKnown RBP4.37□□□□□ -1.71
CUP1-2YHR055C YER190C-BP0CX94 160 aa4.37□□□□□ -1.71
CUP1-2YHR055C YEL077W-AP0CX95 160 aa4.37□□□□□ -1.71
CUP1-2YHR055C YGR296C-BP0CX96 160 aa4.37□□□□□ -1.71
CUP1-2YHR055C YPL283W-BP0CX97 160 aa4.37□□□□□ -1.71
CUP1-2YHR055C YPR204C-AP0CX98 160 aa4.37□□□□□ -1.71
CUP1-2YHR055C MRP2P10663 115 aaPredicted RBP4.37□□□□□ -1.71
CUP1-2YHR055C NCP1P16603 691 aaKnown RBP4.37□□□□□ -1.71
CUP1-2YHR055C CNA1P23287 553 aa4.37□□□□□ -1.71
CUP1-2YHR055C YCL049CP25577 312 aa4.37□□□□□ -1.71
CUP1-2YHR055C OCT1P35999 772 aa4.37□□□□□ -1.71
CUP1-2YHR055C PHM8P40025 321 aa4.37□□□□□ -1.71
CUP1-2YHR055C RPT2P40327 437 aaKnown RBP4.37□□□□□ -1.71
CUP1-2YHR055C DCP2P53550 970 aaKnown RBP4.37□□□□□ -1.71
CUP1-2YHR055C ADE16P54113 591 aaKnown RBP4.37□□□□□ -1.71
CUP1-2YHR055C MRPL13Q02204 264 aa4.37□□□□□ -1.71
CUP1-2YHR055C STP3Q05937 343 aa4.37□□□□□ -1.71
CUP1-2YHR055C VAM6Q07468 1049 aa4.37□□□□□ -1.71
CUP1-2YHR055C GAL4P04386 881 aa4.36□□□□□ -1.71
CUP1-2YHR055C RAD16P31244 790 aa4.36□□□□□ -1.71
CUP1-2YHR055C TPM2P40414 161 aa4.36□□□□□ -1.71
CUP1-2YHR055C YIR016WP40572 265 aa4.36□□□□□ -1.71
CUP1-2YHR055C YPL068CQ02749 293 aa4.36□□□□□ -1.71
CUP1-2YHR055C MCH4Q08268 501 aa4.36□□□□□ -1.71
CUP1-2YHR055C ATX2Q12067 313 aa4.36□□□□□ -1.71
CUP1-2YHR055C TPK1P06244 397 aa4.35□□□□□ -1.71
CUP1-2YHR055C YML003WP0CF16 290 aa4.35□□□□□ -1.71
CUP1-2YHR055C APA1P16550 321 aaKnown RBP4.35□□□□□ -1.71
CUP1-2YHR055C YCR006CP25350 157 aa4.35□□□□□ -1.71
CUP1-2YHR055C TPA1P40032 644 aaKnown RBP4.35□□□□□ -1.71
CUP1-2YHR055C MDV1P47025 714 aa4.35□□□□□ -1.71
CUP1-2YHR055C YPT11P48559 417 aa4.35□□□□□ -1.71
CUP1-2YHR055C UBP8P50102 471 aa4.35□□□□□ -1.71
CUP1-2YHR055C SWA2Q06677 668 aa4.35□□□□□ -1.71
CUP1-2YHR055C YLR049CQ12110 428 aa4.35□□□□□ -1.71
CUP1-2YHR055C COX17Q12287 69 aa4.35□□□□□ -1.71
CUP1-2YHR055C AIM17P23180 465 aaKnown RBP4.34□□□□□ -1.71
CUP1-2YHR055C CDC1P40986 491 aa4.34□□□□□ -1.71
CUP1-2YHR055C SMK1P41808 388 aa4.34□□□□□ -1.71
CUP1-2YHR055C IRC8P47046 822 aa4.34□□□□□ -1.71
CUP1-2YHR055C ASE1P50275 885 aa4.34□□□□□ -1.71
CUP1-2YHR055C ARC35P53731 342 aaKnown RBP4.34□□□□□ -1.71
CUP1-2YHR055C RPL15BP54780 204 aaPredicted RBP4.34□□□□□ -1.71
CUP1-2YHR055C MTF2P10849 440 aa4.33□□□□□ -1.72
CUP1-2YHR055C PCT1P13259 424 aa4.33□□□□□ -1.72
CUP1-2YHR055C PFK2P16862 959 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
CUP1-2YHR055C DBF20P32328 564 aa4.33□□□□□ -1.72
CUP1-2YHR055C VPS25P47142 202 aa4.33□□□□□ -1.72
CUP1-2YHR055C COG1P53079 417 aa4.33□□□□□ -1.72
CUP1-2YHR055C BOP3P53958 396 aa4.33□□□□□ -1.72
CUP1-2YHR055C VMS1Q04311 632 aaKnown RBP4.33□□□□□ -1.72
CUP1-2YHR055C CSR1Q06705 408 aaKnown RBP4.33□□□□□ -1.72
CUP1-2YHR055C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72 RIP-Chip
CUP1-2YHR055C UBC1P21734 215 aaKnown RBP4.32□□□□□ -1.72
CUP1-2YHR055C YCP4P25349 247 aaKnown RBP4.32□□□□□ -1.72
CUP1-2YHR055C MRS6P32864 603 aaKnown RBP4.32□□□□□ -1.72
CUP1-2YHR055C XRS2P33301 854 aa4.32□□□□□ -1.72
CUP1-2YHR055C LHS1P36016 881 aa4.32□□□□□ -1.72
CUP1-2YHR055C EXO84P38261 753 aa4.32□□□□□ -1.72
CUP1-2YHR055C MRX1P40050 688 aa4.32□□□□□ -1.72
CUP1-2YHR055C CSL4P53859 292 aaPredicted RBP4.32□□□□□ -1.72
CUP1-2YHR055C IOC4Q04213 475 aa4.32□□□□□ -1.72
CUP1-2YHR055C SWF1Q04629 336 aa4.32□□□□□ -1.72
CUP1-2YHR055C CIA1Q05583 330 aa4.32□□□□□ -1.72
CUP1-2YHR055C PIG1Q06216 648 aa4.32□□□□□ -1.72
CUP1-2YHR055C CIR2Q08822 631 aa4.32□□□□□ -1.72
CUP1-2YHR055C UBX3Q12229 455 aa4.32□□□□□ -1.72
CUP1-2YHR055C ERG27Q12452 347 aaKnown RBP4.32□□□□□ -1.72
CUP1-2YHR055C TY2A-LR1P0C2J4 438 aa4.31□□□□□ -1.72
CUP1-2YHR055C TY2A-FP0CX61 438 aa4.31□□□□□ -1.72
CUP1-2YHR055C TY2A-GR2P0CX62 438 aa4.31□□□□□ -1.72
CUP1-2YHR055C YSP3P25036 478 aa4.31□□□□□ -1.72
CUP1-2YHR055C TY2A-CP25383 438 aa4.31□□□□□ -1.72
CUP1-2YHR055C TFC3P34111 1160 aa4.31□□□□□ -1.72
CUP1-2YHR055C ADE17P38009 592 aaKnown RBP4.31□□□□□ -1.72
CUP1-2YHR055C UME6P39001 836 aa4.31□□□□□ -1.72
CUP1-2YHR055C IST3P40565 148 aaPredicted RBP4.31□□□□□ -1.72
CUP1-2YHR055C SAP185P40856 1058 aa4.31□□□□□ -1.72
CUP1-2YHR055C TY2A-DR2Q03483 438 aa4.31□□□□□ -1.72
CUP1-2YHR055C CRN1Q06440 651 aa4.31□□□□□ -1.72
CUP1-2YHR055C TMA16Q08687 178 aa4.31□□□□□ -1.72
CUP1-2YHR055C TY2A-BQ12260 438 aa4.31□□□□□ -1.72
CUP1-2YHR055C TY2A-OR2Q12293 438 aa4.31□□□□□ -1.72
CUP1-2YHR055C TY2A-DR1Q12392 438 aa4.31□□□□□ -1.72
CUP1-2YHR055C TY2A-OR1Q12439 438 aa4.31□□□□□ -1.72
CUP1-2YHR055C TY2A-DR3Q99303 438 aa4.31□□□□□ -1.72
CUP1-2YHR055C ATO2P32907 282 aa4.3□□□□□ -1.72
CUP1-2YHR055C SOF1P33750 489 aaKnown RBP4.3□□□□□ -1.72
CUP1-2YHR055C TEF4P36008 412 aaKnown RBP4.3□□□□□ -1.72
CUP1-2YHR055C LYS20P48570 428 aaKnown RBP4.3□□□□□ -1.72
CUP1-2YHR055C FCP1Q03254 732 aa4.3□□□□□ -1.72
CUP1-2YHR055C YLR455WQ06188 304 aa4.3□□□□□ -1.72
CUP1-2YHR055C SNA4Q07549 140 aa4.3□□□□□ -1.72
CUP1-2YHR055C GSH2Q08220 491 aa4.3□□□□□ -1.72
CUP1-2YHR055C SSM4P40318 1319 aa4.29□□□□□ -1.72
CUP1-2YHR055C GPA1P08539 472 aa4.29□□□□□ -1.72
CUP1-2YHR055C CDC15P27636 974 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms