RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W RIC1P40395 1056 aa4.49□□□□□ -1.69
PRE9YGR135W MNT2P53059 558 aa4.49□□□□□ -1.69
PRE9YGR135W YBP2P53169 641 aa4.49□□□□□ -1.69
PRE9YGR135W MDR1P53258 950 aa4.49□□□□□ -1.69
PRE9YGR135W YAP1802P53309 568 aa4.49□□□□□ -1.69
PRE9YGR135W SQS1P53866 767 aaKnown RBP4.49□□□□□ -1.69
PRE9YGR135W PKH1Q03407 766 aa4.49□□□□□ -1.69
PRE9YGR135W RSM24Q03976 319 aa4.49□□□□□ -1.69
PRE9YGR135W SOV1Q04748 898 aa4.49□□□□□ -1.69
PRE9YGR135W SGO1Q08490 590 aa4.49□□□□□ -1.69
PRE9YGR135W PLP2Q12017 286 aa4.49□□□□□ -1.69
PRE9YGR135W HOS1Q12214 470 aa4.49□□□□□ -1.69
PRE9YGR135W ATG11Q12527 1178 aa4.49□□□□□ -1.69
PRE9YGR135W VPS5Q92331 675 aa4.49□□□□□ -1.69
PRE9YGR135W FKS3Q04952 1785 aa4.49□□□□□ -1.69
PRE9YGR135W CYC1P00044 109 aaPredicted RBP4.48□□□□□ -1.69
PRE9YGR135W SUP35P05453 685 aaKnown RBP4.48□□□□□ -1.69
PRE9YGR135W PCK1P10963 549 aa4.48□□□□□ -1.69
PRE9YGR135W BET2P20133 325 aa4.48□□□□□ -1.69
PRE9YGR135W IME1P21190 360 aa4.48□□□□□ -1.69
PRE9YGR135W SIR1P21691 654 aa4.48□□□□□ -1.69
PRE9YGR135W PRP45P28004 379 aaPredicted RBP4.48□□□□□ -1.69
PRE9YGR135W PSO2P30620 661 aa4.48□□□□□ -1.69
PRE9YGR135W RPC25P35718 212 aa4.48□□□□□ -1.69
PRE9YGR135W SET3P36124 751 aa4.48□□□□□ -1.69
PRE9YGR135W YBR138CP38277 524 aa4.48□□□□□ -1.69
PRE9YGR135W YHR078WP38799 552 aa4.48□□□□□ -1.69
PRE9YGR135W YMR124WP39523 943 aaKnown RBP4.48□□□□□ -1.69
PRE9YGR135W MAD2P40958 196 aa4.48□□□□□ -1.69
PRE9YGR135W RRT6P53117 311 aaPredicted RBP4.48□□□□□ -1.69
PRE9YGR135W RPT6Q01939 405 aaKnown RBP4.48□□□□□ -1.69
PRE9YGR135W GCN5Q03330 439 aa4.48□□□□□ -1.69
PRE9YGR135W CLU1Q03690 1277 aaKnown RBP4.48□□□□□ -1.69
PRE9YGR135W RCF1Q03713 159 aa4.48□□□□□ -1.69
PRE9YGR135W URH1Q04179 340 aa4.48□□□□□ -1.69
PRE9YGR135W UBX2Q04228 584 aa4.48□□□□□ -1.69
PRE9YGR135W SNO4Q04902 237 aa4.48□□□□□ -1.69
PRE9YGR135W ASM4Q05166 528 aa4.48□□□□□ -1.69
PRE9YGR135W CDA1Q06702 301 aa4.48□□□□□ -1.69
PRE9YGR135W STP4Q07351 490 aa4.48□□□□□ -1.69
PRE9YGR135W ABP140Q08641 628 aaKnown RBP4.48□□□□□ -1.69
PRE9YGR135W HSP33Q08914 237 aaKnown RBP4.48□□□□□ -1.69
PRE9YGR135W HSP32Q08992 237 aa4.48□□□□□ -1.69
PRE9YGR135W UTP10P42945 1769 aaKnown RBP4.48□□□□□ -1.69
PRE9YGR135W JIP3O13555 125 aa4.47□□□□□ -1.69
PRE9YGR135W SEM1O94742 89 aa4.47□□□□□ -1.69
PRE9YGR135W HIS4P00815 799 aaKnown RBP4.47□□□□□ -1.69
PRE9YGR135W ADE3P07245 946 aaKnown RBP4.47□□□□□ -1.69
PRE9YGR135W SPO16P17122 198 aa4.47□□□□□ -1.69
PRE9YGR135W COQ1P18900 473 aa4.47□□□□□ -1.69
PRE9YGR135W RIT1P23796 513 aa4.47□□□□□ -1.69
PRE9YGR135W BUD14P27637 709 aa4.47□□□□□ -1.69
PRE9YGR135W PUP2P32379 260 aa4.47□□□□□ -1.69
PRE9YGR135W LOS1P33418 1100 aaPredicted RBP4.47□□□□□ -1.69
PRE9YGR135W SPP381P38282 291 aaPredicted RBP4.47□□□□□ -1.69
PRE9YGR135W ERG7P38604 731 aa4.47□□□□□ -1.69
PRE9YGR135W YLF2P38746 405 aa4.47□□□□□ -1.69
PRE9YGR135W MEF2P39677 819 aa4.47□□□□□ -1.69
PRE9YGR135W PRM2P40534 656 aa4.47□□□□□ -1.69
PRE9YGR135W TMA22P47089 198 aaPredicted RBP4.47□□□□□ -1.69
PRE9YGR135W TAF4P50105 388 aa4.47□□□□□ -1.69
PRE9YGR135W SPT20P50875 604 aa4.47□□□□□ -1.69
PRE9YGR135W COX18P53239 316 aa4.47□□□□□ -1.69
PRE9YGR135W ZPR1P53303 486 aaKnown RBP4.47□□□□□ -1.69
PRE9YGR135W YNR071CP53757 342 aa4.47□□□□□ -1.69
PRE9YGR135W YML119WQ03208 357 aa4.47□□□□□ -1.69
PRE9YGR135W YMR114CQ04471 368 aaKnown RBP4.47□□□□□ -1.69
PRE9YGR135W SPC24Q04477 213 aa4.47□□□□□ -1.69
PRE9YGR135W ERV41Q04651 352 aa4.47□□□□□ -1.69
PRE9YGR135W MFB1Q04922 465 aa4.47□□□□□ -1.69
PRE9YGR135W MRD1Q06106 887 aaKnown RBP4.47□□□□□ -1.69
PRE9YGR135W PIG1Q06216 648 aa4.47□□□□□ -1.69
PRE9YGR135W TFC6Q06339 672 aa4.47□□□□□ -1.69
PRE9YGR135W SIL1Q08199 421 aa4.47□□□□□ -1.69
PRE9YGR135W YOL075CQ08234 1294 aa4.47□□□□□ -1.69
PRE9YGR135W DAS2Q12084 232 aa4.47□□□□□ -1.69
PRE9YGR135W DIN7Q12086 430 aa4.47□□□□□ -1.69
PRE9YGR135W SKM1Q12469 655 aa4.47□□□□□ -1.69
PRE9YGR135W CHO2P05374 869 aaKnown RBP4.46□□□□□ -1.7
PRE9YGR135W RPB2P08518 1224 aaKnown RBP4.46□□□□□ -1.7
PRE9YGR135W GCD2P12754 651 aaPredicted RBP4.46□□□□□ -1.7
PRE9YGR135W RED1P14291 827 aa4.46□□□□□ -1.7
PRE9YGR135W FRS1P15624 595 aaKnown RBP4.46□□□□□ -1.7
PRE9YGR135W ALG1P16661 449 aa4.46□□□□□ -1.7
PRE9YGR135W YCR051WP25631 222 aa4.46□□□□□ -1.7
PRE9YGR135W PET127P32606 800 aa4.46□□□□□ -1.7
PRE9YGR135W ABZ1P37254 787 aaPredicted RBP4.46□□□□□ -1.7
PRE9YGR135W HEK2P38199 381 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
PRE9YGR135W MUM2P38236 366 aa4.46□□□□□ -1.7
PRE9YGR135W RXT2P38255 430 aa4.46□□□□□ -1.7
PRE9YGR135W SRP72P38688 640 aaKnown RBP4.46□□□□□ -1.7
PRE9YGR135W SIP3P38717 1229 aa4.46□□□□□ -1.7
PRE9YGR135W APE4P38821 490 aa4.46□□□□□ -1.7
PRE9YGR135W REV7P38927 245 aa4.46□□□□□ -1.7
PRE9YGR135W CCT2P39076 527 aaKnown RBP4.46□□□□□ -1.7
PRE9YGR135W PCI8P40512 444 aa4.46□□□□□ -1.7
PRE9YGR135W YIL001WP40560 513 aa4.46□□□□□ -1.7
PRE9YGR135W YNL320WP42840 284 aa4.46□□□□□ -1.7
PRE9YGR135W BTN2P53286 410 aa4.46□□□□□ -1.7
PRE9YGR135W ACS1Q01574 713 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms