RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W RTT109Q07794 436 aa3.68□□□□□ -1.82
CAF130YGR134W PRS5Q12265 496 aaKnown RBP3.68□□□□□ -1.82
CAF130YGR134W YPT6Q99260 215 aa3.68□□□□□ -1.82
CAF130YGR134W TUB3P09734 445 aaKnown RBP3.68□□□□□ -1.82
CAF130YGR134W ERS1P17261 260 aa3.68□□□□□ -1.82
CAF130YGR134W MDH1P17505 334 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
CAF130YGR134W DIT1P21623 536 aa3.68□□□□□ -1.82
CAF130YGR134W ERG8P24521 451 aa3.68□□□□□ -1.82
CAF130YGR134W SPS22P25380 463 aa3.68□□□□□ -1.82
CAF130YGR134W PHO91P27514 894 aa3.68□□□□□ -1.82
CAF130YGR134W CHS6P40955 746 aa3.68□□□□□ -1.82
CAF130YGR134W HOP2P53187 214 aa3.68□□□□□ -1.82
CAF130YGR134W PPN1Q04119 674 aa3.68□□□□□ -1.82
CAF130YGR134W CUR1Q06469 252 aa3.68□□□□□ -1.82
CAF130YGR134W ISA2Q12425 185 aa3.68□□□□□ -1.82
CAF130YGR134W SPO14P36126 1683 aa3.68□□□□□ -1.82
CAF130YGR134W SUP35P05453 685 aaKnown RBP3.68□□□□□ -1.82
CAF130YGR134W STE12P13574 688 aa3.68□□□□□ -1.82
CAF130YGR134W YCR051WP25631 222 aa3.68□□□□□ -1.82
CAF130YGR134W YKT6P36015 200 aaKnown RBP3.68□□□□□ -1.82
CAF130YGR134W GPT2P36148 743 aa3.68□□□□□ -1.82
CAF130YGR134W TOM22P49334 152 aa3.68□□□□□ -1.82
CAF130YGR134W NAM8Q00539 523 aaKnown RBP3.68□□□□□ -1.82
CAF130YGR134W YKR011CQ02209 353 aa3.68□□□□□ -1.82
CAF130YGR134W HED1Q03937 162 aa3.68□□□□□ -1.82
CAF130YGR134W UBX3Q12229 455 aa3.68□□□□□ -1.82
CAF130YGR134W ATG11Q12527 1178 aa3.68□□□□□ -1.82
CAF130YGR134W RPS9AO13516 197 aaKnown RBP3.67□□□□□ -1.82
CAF130YGR134W RPS9BP05755 195 aaKnown RBP3.67□□□□□ -1.82
CAF130YGR134W ARG80P07249 177 aa3.67□□□□□ -1.82
CAF130YGR134W CDC24P11433 854 aaPredicted RBP3.67□□□□□ -1.82
CAF130YGR134W SAM35P14693 329 aa3.67□□□□□ -1.82
CAF130YGR134W PRP4P20053 465 aaKnown RBP3.67□□□□□ -1.82
CAF130YGR134W PWP1P21304 576 aaKnown RBP3.67□□□□□ -1.82
CAF130YGR134W BUD5P25300 642 aaPredicted RBP3.67□□□□□ -1.82
CAF130YGR134W YCR061WP25639 631 aa3.67□□□□□ -1.82
CAF130YGR134W RPD3P32561 433 aa3.67□□□□□ -1.82
CAF130YGR134W SMI1P32566 505 aa3.67□□□□□ -1.82
CAF130YGR134W RPT3P33298 428 aaKnown RBP3.67□□□□□ -1.82
CAF130YGR134W WBP1P33767 430 aaKnown RBP3.67□□□□□ -1.82
CAF130YGR134W OTU2P38747 307 aaKnown RBP3.67□□□□□ -1.82
CAF130YGR134W SLZ1P40167 298 aa3.67□□□□□ -1.82
CAF130YGR134W ALG5P40350 334 aa3.67□□□□□ -1.82
CAF130YGR134W ZIM17P42844 174 aa3.67□□□□□ -1.82
CAF130YGR134W COG1P53079 417 aa3.67□□□□□ -1.82
CAF130YGR134W GAD1Q04792 585 aa3.67□□□□□ -1.82
CAF130YGR134W STE23Q06010 1027 aa3.67□□□□□ -1.82
CAF130YGR134W YEH1Q07804 573 aa3.67□□□□□ -1.82
CAF130YGR134W ZRT2Q12436 422 aa3.67□□□□□ -1.82
CAF130YGR134W MRE11P32829 692 aa3.67□□□□□ -1.82
CAF130YGR134W VPS45P38932 577 aa3.67□□□□□ -1.82
CAF130YGR134W SCC4P40090 624 aa3.67□□□□□ -1.82
CAF130YGR134W RRT14P40470 206 aa3.67□□□□□ -1.82
CAF130YGR134W ELP2P42935 788 aa3.67□□□□□ -1.82
CAF130YGR134W GCN20P43535 752 aaKnown RBP3.67□□□□□ -1.82
CAF130YGR134W UBP15P50101 1230 aa3.67□□□□□ -1.82
CAF130YGR134W ORC4P54791 529 aa3.67□□□□□ -1.82
CAF130YGR134W EFR3Q03653 782 aaKnown RBP3.67□□□□□ -1.82
CAF130YGR134W ARR3Q06598 404 aa3.67□□□□□ -1.82
CAF130YGR134W MHP1P43638 1398 aa3.67□□□□□ -1.82
CAF130YGR134W STF1P01098 86 aa3.66□□□□□ -1.82
CAF130YGR134W FAA1P30624 700 aaKnown RBP3.66□□□□□ -1.82
CAF130YGR134W SMY1P32364 656 aaKnown RBP3.66□□□□□ -1.82
CAF130YGR134W MRPL16P38064 232 aa3.66□□□□□ -1.82
CAF130YGR134W GCD14P46959 383 aaPredicted RBP3.66□□□□□ -1.82
CAF130YGR134W YJL045WP47052 634 aa3.66□□□□□ -1.82
CAF130YGR134W NIT3P49954 291 aa3.66□□□□□ -1.82
CAF130YGR134W GLO1P50107 326 aa3.66□□□□□ -1.82
CAF130YGR134W TEL2P53038 688 aa3.66□□□□□ -1.82
CAF130YGR134W EOS1P53938 366 aa3.66□□□□□ -1.82
CAF130YGR134W FCP1Q03254 732 aa3.66□□□□□ -1.82
CAF130YGR134W SSL1Q04673 461 aaPredicted RBP3.66□□□□□ -1.82
CAF130YGR134W GSH2Q08220 491 aa3.66□□□□□ -1.82
CAF130YGR134W RSB1Q08417 382 aa3.66□□□□□ -1.82
CAF130YGR134W ULA1Q12059 462 aa3.66□□□□□ -1.82
CAF130YGR134W MDY2Q12285 212 aa3.66□□□□□ -1.82
CAF130YGR134W COX17Q12287 69 aa3.66□□□□□ -1.82
CAF130YGR134W HAP1P0CE41 1502 aa3.66□□□□□ -1.82
CAF130YGR134W SYN8P31377 255 aa3.66□□□□□ -1.82
CAF130YGR134W DGR2P32330 852 aa3.66□□□□□ -1.82
CAF130YGR134W SRB2P34162 210 aa3.66□□□□□ -1.82
CAF130YGR134W CRG1P38892 291 aaRIP-Chip data3.66□□□□□ -1.82not detected
CAF130YGR134W MET12P46151 657 aa3.66□□□□□ -1.82
CAF130YGR134W YJL181WP46987 611 aa3.66□□□□□ -1.82
CAF130YGR134W YGL036WP53185 909 aaPredicted RBP3.66□□□□□ -1.82
CAF130YGR134W DAK1P54838 584 aaKnown RBP3.66□□□□□ -1.82
CAF130YGR134W ALG6Q12001 544 aaKnown RBP3.66□□□□□ -1.82
CAF130YGR134W YBR126W-AQ8TGU7 68 aa3.66□□□□□ -1.82
CAF130YGR134W YSP3P25036 478 aa3.66□□□□□ -1.82
CAF130YGR134W REI1P38344 393 aaPredicted RBP3.66□□□□□ -1.82
CAF130YGR134W SMC2P38989 1170 aaKnown RBP3.66□□□□□ -1.82
CAF130YGR134W IAH1P41734 238 aa3.66□□□□□ -1.82
CAF130YGR134W SLU7Q02775 382 aaKnown RBP3.66□□□□□ -1.82
CAF130YGR134W TRS31Q03337 283 aa3.66□□□□□ -1.82
CAF130YGR134W SMC5Q08204 1093 aa3.66□□□□□ -1.82
CAF130YGR134W GPN2Q08726 347 aaPredicted RBP3.66□□□□□ -1.82
CAF130YGR134W LDB17Q12342 491 aa3.66□□□□□ -1.82
CAF130YGR134W YRF1-1P0CX20 1796 aa3.66□□□□□ -1.82
CAF130YGR134W YRF1-5P0CX21 1796 aa3.66□□□□□ -1.82
CAF130YGR134W YRF1-8P0CX22 1796 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms