RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B IDP3P53982 420 aaKnown RBP1.7□□□□□ -2.14
YGR109W-BYGR109W-B SPN1Q06505 410 aaPredicted RBP1.7□□□□□ -2.14
YGR109W-BYGR109W-B YMR085WP0CF18 432 aa1.7□□□□□ -2.14
YGR109W-BYGR109W-B CBP3P21560 335 aa1.7□□□□□ -2.14
YGR109W-BYGR109W-B GSY2P27472 705 aa1.7□□□□□ -2.14
YGR109W-BYGR109W-B YNK1P36010 153 aaKnown RBP1.7□□□□□ -2.14
YGR109W-BYGR109W-B RRP3P38712 501 aaKnown RBP1.7□□□□□ -2.14
YGR109W-BYGR109W-B YHR097CP38809 366 aaKnown RBP1.7□□□□□ -2.14
YGR109W-BYGR109W-B UTP18P40362 594 aaPredicted RBP1.7□□□□□ -2.14
YGR109W-BYGR109W-B YRB1P41920 201 aaKnown RBP1.7□□□□□ -2.14
YGR109W-BYGR109W-B NMD5P46970 1048 aa1.7□□□□□ -2.14
YGR109W-BYGR109W-B MET13P53128 600 aa1.7□□□□□ -2.14
YGR109W-BYGR109W-B DCP2P53550 970 aaKnown RBP1.7□□□□□ -2.14
YGR109W-BYGR109W-B DSL1P53847 754 aa1.7□□□□□ -2.14
YGR109W-BYGR109W-B VPS9P54787 451 aa1.7□□□□□ -2.14
YGR109W-BYGR109W-B VTC3Q02725 835 aa1.7□□□□□ -2.14
YGR109W-BYGR109W-B YLR407WQ06070 228 aa1.7□□□□□ -2.14
YGR109W-BYGR109W-B NUS1Q12063 375 aa1.7□□□□□ -2.14
YGR109W-BYGR109W-B DAP1Q12091 152 aa1.7□□□□□ -2.14
YGR109W-BYGR109W-B PFK27Q12471 397 aaPredicted RBP1.7□□□□□ -2.14
YGR109W-BYGR109W-B RPB4P20433 221 aaPredicted RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B NUP1P20676 1076 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B SPE2P21182 396 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B RER1P25560 188 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B MRPL40P36534 297 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B GDI1P39958 451 aaKnown RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B TAX4P47030 604 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B IRC8P47046 822 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B YGR153WP48238 217 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B YIP4P53093 235 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B BTN2P53286 410 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B MRPL50P53724 139 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B RRP17Q04031 235 aaPredicted RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B CFT2Q12102 859 aaPredicted RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B ULS1Q08562 1619 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B HOM3P10869 527 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B MCM4P30665 933 aaKnown RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B SSO1P32867 290 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B AGP2P38090 596 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B VPS41P38959 992 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B BUD8P41698 603 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B MNN11P46985 422 aaKnown RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B YHC3P47040 408 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B EMC2P47133 292 aaKnown RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B CNM67P53865 581 aaKnown RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B APL5Q08951 932 aaKnown RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B HFI1Q12060 488 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B SLX4Q12098 748 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B RDL1Q12305 139 aaKnown RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B AI5_ALPHAQ9ZZX1 630 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B LOS1P33418 1100 aaPredicted RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B ASK1P35734 292 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B PET100P38958 111 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B SSU1P41930 458 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B AIM14P53109 570 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B YGL082WP53155 381 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B LEE1Q02799 301 aaKnown RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B GIP3Q03016 1276 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B EFR3Q03653 782 aaKnown RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B YLR281CQ05863 155 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B DBP9Q06218 594 aaKnown RBP1.69□□□□□ -2.14
YGR109W-BYGR109W-B ERP4Q12450 207 aa1.69□□□□□ -2.14
YGR109W-BYGR109W-B NUP159P40477 1460 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B TOP2P06786 1428 aaKnown RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B PAP1P29468 568 aaKnown RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B ECM25P32525 599 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B YKL071WP36086 256 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B NOP4P37838 685 aaKnown RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B SAP1P39955 897 aaKnown RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B NUP53Q03790 475 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B BLS1Q06071 122 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B MRN1Q08925 612 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
YGR109W-BYGR109W-B MED1Q12321 566 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B AAC1P04710 309 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B RPL6BP05739 176 aaKnown RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B AAD3P25612 363 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B TFB1P32776 642 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B ARC19P33204 171 aaKnown RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B ELF1P36053 145 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B YJL193WP39542 402 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B VTC2P43585 828 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B HST1P53685 503 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B ATP23P53722 227 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B RPL6AQ02326 176 aaKnown RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B GRX5Q02784 150 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B IOC4Q04213 475 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B BI2P03873 423 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B OLE1P21147 510 aaKnown RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B IME1P21190 360 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B KRR1P25586 316 aaPredicted RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B PEP3P27801 918 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B CHS3P29465 1165 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B DGR2P32330 852 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B TOA1P32773 286 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B TMN3P40071 706 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B SCS3P53012 380 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B RBG2P53295 368 aaKnown RBP1.68□□□□□ -2.14
YGR109W-BYGR109W-B MEH1Q02205 184 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B COG4Q06096 861 aa1.68□□□□□ -2.14
YGR109W-BYGR109W-B VAM6Q07468 1049 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms