RNA–Protein interactions for RNA: YGR058W

PEF1, Transcript of Penta-EF-hand protein, yeast

Gene PEF1, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEF1	YGR058W	AIM6	Q07716	390 aa		4.22	□□□□□ -1.73
PEF1	YGR058W	TY3B-G	Q99315	1547 aa		4.21	□□□□□ -1.73
PEF1	YGR058W	SEC18	P18759	758 aa	Known RBP	4.21	□□□□□ -1.74
PEF1	YGR058W	ATO2	P32907	282 aa		4.21	□□□□□ -1.74
PEF1	YGR058W	RPF2	P36160	344 aa	Known RBP	4.21	□□□□□ -1.74
PEF1	YGR058W	LSC1	P53598	329 aa	Known RBP	4.21	□□□□□ -1.74
PEF1	YGR058W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PEF1	YGR058W	IRC20	Q06554	1556 aa		4.21	□□□□□ -1.74
PEF1	YGR058W	NUP170	P38181	1502 aa		4.21	□□□□□ -1.74
PEF1	YGR058W	ILV2	P07342	687 aa	Known RBP	4.2	□□□□□ -1.74
PEF1	YGR058W	SSB1	P11484	613 aa	Known RBP	4.2	□□□□□ -1.74
PEF1	YGR058W	SIP1	P32578	815 aa		4.2	□□□□□ -1.74
PEF1	YGR058W	SSB2	P40150	613 aa	Known RBP	4.2	□□□□□ -1.74
PEF1	YGR058W	YIR016W	P40572	265 aa		4.2	□□□□□ -1.74
PEF1	YGR058W	MDV1	P47025	714 aa		4.2	□□□□□ -1.74
PEF1	YGR058W	NPA3	P47122	385 aa		4.2	□□□□□ -1.74
PEF1	YGR058W	SNA4	Q07549	140 aa		4.2	□□□□□ -1.74
PEF1	YGR058W	ICL2	Q12031	575 aa		4.2	□□□□□ -1.74
PEF1	YGR058W	ARP7	Q12406	477 aa		4.2	□□□□□ -1.74
PEF1	YGR058W	YBR255C-A	Q3E776	120 aa		4.2	□□□□□ -1.74
PEF1	YGR058W	PDR12	Q02785	1511 aa		4.2	□□□□□ -1.74
PEF1	YGR058W	IKI3	Q06706	1349 aa	Known RBP	4.2	□□□□□ -1.74
PEF1	YGR058W	YBT1	P32386	1661 aa		4.19	□□□□□ -1.74
PEF1	YGR058W	SPO14	P36126	1683 aa		4.19	□□□□□ -1.74
PEF1	YGR058W	DOP1	Q03921	1698 aa		4.19	□□□□□ -1.74
PEF1	YGR058W	PDE1	P22434	369 aa		4.19	□□□□□ -1.74
PEF1	YGR058W	PTC6	P25646	442 aa		4.19	□□□□□ -1.74
PEF1	YGR058W	TOM71	P38825	639 aa	Known RBP	4.19	□□□□□ -1.74
PEF1	YGR058W	YJL107C	P42947	387 aa		4.19	□□□□□ -1.74
PEF1	YGR058W	TGL2	P54857	326 aa		4.19	□□□□□ -1.74
PEF1	YGR058W	VTC3	Q02725	835 aa		4.19	□□□□□ -1.74
PEF1	YGR058W	NUP53	Q03790	475 aa		4.19	□□□□□ -1.74
PEF1	YGR058W	RRI1	Q12468	440 aa		4.19	□□□□□ -1.74
PEF1	YGR058W	CNA1	P23287	553 aa		4.18	□□□□□ -1.74
PEF1	YGR058W	FRD1	P32614	470 aa	Known RBP	4.18	□□□□□ -1.74
PEF1	YGR058W	MAD3	P47074	515 aa		4.18	□□□□□ -1.74
PEF1	YGR058W	ORC5	P50874	479 aa		4.18	□□□□□ -1.74
PEF1	YGR058W	LEA1	Q08963	238 aa	Predicted RBP	4.18	□□□□□ -1.74
PEF1	YGR058W	ATX2	Q12067	313 aa		4.18	□□□□□ -1.74
PEF1	YGR058W	CAT8	P39113	1433 aa		4.18	□□□□□ -1.74
PEF1	YGR058W	MMS1	Q06211	1407 aa		4.18	□□□□□ -1.74
PEF1	YGR058W	SCO2	P38072	301 aa		4.17	□□□□□ -1.74
PEF1	YGR058W	YIL152W	P40455	235 aa		4.17	□□□□□ -1.74
PEF1	YGR058W	THI3	Q07471	609 aa		4.17	□□□□□ -1.74
PEF1	YGR058W	SRL1	Q08673	210 aa		4.17	□□□□□ -1.74
PEF1	YGR058W	BUD7	Q08754	746 aa		4.17	□□□□□ -1.74
PEF1	YGR058W	DNF2	Q12675	1612 aa		4.17	□□□□□ -1.74
PEF1	YGR058W	GDB1	Q06625	1536 aa		4.16	□□□□□ -1.74
PEF1	YGR058W	DRS2	P39524	1355 aa		4.16	□□□□□ -1.74
PEF1	YGR058W	COX1	P00401	534 aa		4.16	□□□□□ -1.74
PEF1	YGR058W	ARN1	P38731	627 aa		4.16	□□□□□ -1.74
PEF1	YGR058W	STT3	P39007	718 aa	Known RBP	4.16	□□□□□ -1.74
PEF1	YGR058W	CDC1	P40986	491 aa		4.16	□□□□□ -1.74
PEF1	YGR058W	YPT11	P48559	417 aa		4.16	□□□□□ -1.74
PEF1	YGR058W	YGR079W	P53249	370 aa		4.16	□□□□□ -1.74
PEF1	YGR058W	YPR003C	P53394	754 aa		4.16	□□□□□ -1.74
PEF1	YGR058W	MPD2	Q99316	277 aa		4.16	□□□□□ -1.74
PEF1	YGR058W	PDR10	P51533	1564 aa		4.15	□□□□□ -1.74
PEF1	YGR058W	LAC1	P28496	418 aa		4.15	□□□□□ -1.75
PEF1	YGR058W	MAF1	P41910	395 aa		4.15	□□□□□ -1.75
PEF1	YGR058W	BOP3	P53958	396 aa		4.15	□□□□□ -1.75
PEF1	YGR058W	SND1	Q04007	877 aa		4.15	□□□□□ -1.75
PEF1	YGR058W	ECM22	Q05958	814 aa	Predicted RBP	4.15	□□□□□ -1.75
PEF1	YGR058W	DSE3	Q08729	430 aa		4.15	□□□□□ -1.75
PEF1	YGR058W	UBX3	Q12229	455 aa		4.15	□□□□□ -1.75
PEF1	YGR058W	YCR043C	P25361	127 aa		4.14	□□□□□ -1.75
PEF1	YGR058W	SWC3	P31376	625 aa		4.14	□□□□□ -1.75
PEF1	YGR058W	MSS51	P32335	436 aa		4.14	□□□□□ -1.75
PEF1	YGR058W	NIC96	P34077	839 aa		4.14	□□□□□ -1.75
PEF1	YGR058W	HES1	P35843	434 aa		4.14	□□□□□ -1.75
PEF1	YGR058W	TAM41	P53230	385 aa		4.14	□□□□□ -1.75
PEF1	YGR058W	YNL144C	P53907	740 aa		4.14	□□□□□ -1.75
PEF1	YGR058W	YOL114C	Q12322	202 aa		4.14	□□□□□ -1.75
PEF1	YGR058W	SSM4	P40318	1319 aa		4.14	□□□□□ -1.75
PEF1	YGR058W	SIR1	P21691	654 aa		4.13	□□□□□ -1.75
PEF1	YGR058W	GCS1	P35197	352 aa		4.13	□□□□□ -1.75
PEF1	YGR058W	FUN12	P39730	1002 aa	Known RBP	4.13	□□□□□ -1.75
PEF1	YGR058W	YRB30	P53107	440 aa	Predicted RBP	4.13	□□□□□ -1.75
PEF1	YGR058W	YMR034C	Q05131	434 aa	Predicted RBP	4.13	□□□□□ -1.75
PEF1	YGR058W	PDR8	Q06149	701 aa		4.13	□□□□□ -1.75
PEF1	YGR058W	MLH2	Q07980	695 aa		4.13	□□□□□ -1.75
PEF1	YGR058W	ARO1	P08566	1588 aa	Known RBP	4.13	□□□□□ -1.75
PEF1	YGR058W	NUP157	P40064	1391 aa	Known RBP	4.13	□□□□□ -1.75
PEF1	YGR058W	ARC40	P38328	384 aa	Known RBP	4.12	□□□□□ -1.75
PEF1	YGR058W	CAB2	P40506	365 aa		4.12	□□□□□ -1.75
PEF1	YGR058W	YPL108W	Q02872	168 aa	Predicted RBP	4.12	□□□□□ -1.75
PEF1	YGR058W	GSH2	Q08220	491 aa		4.12	□□□□□ -1.75
PEF1	YGR058W	NEW1	Q08972	1196 aa	Known RBP	4.12	□□□□□ -1.75
PEF1	YGR058W	RPL42A	P0CX27	106 aa	Known RBP	4.11	□□□□□ -1.75
PEF1	YGR058W	RPL42B	P0CX28	106 aa	Known RBP	4.11	□□□□□ -1.75
PEF1	YGR058W	RIT1	P23796	513 aa		4.11	□□□□□ -1.75
PEF1	YGR058W	SWI4	P25302	1093 aa	Known RBP	4.11	□□□□□ -1.75
PEF1	YGR058W	URK1	P27515	501 aa		4.11	□□□□□ -1.75
PEF1	YGR058W	OCT1	P35999	772 aa		4.11	□□□□□ -1.75
PEF1	YGR058W	VPS41	P38959	992 aa		4.11	□□□□□ -1.75
PEF1	YGR058W	TPA1	P40032	644 aa	Known RBP	4.11	□□□□□ -1.75
PEF1	YGR058W	TES1	P41903	349 aa	Known RBP	4.11	□□□□□ -1.75
PEF1	YGR058W	PEX8	P53248	589 aa		4.11	□□□□□ -1.75
PEF1	YGR058W	EAF7	P53911	425 aa	Known RBP	4.11	□□□□□ -1.75
PEF1	YGR058W	MOT3	P54785	490 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms