RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W YLR302CO13544 120 aa3.65□□□□□ -1.83
SEC4YFL005W FUM1P08417 488 aaKnown RBP3.65□□□□□ -1.83
SEC4YFL005W RFA2P26754 273 aaKnown RBP3.65□□□□□ -1.83
SEC4YFL005W GSY2P27472 705 aa3.65□□□□□ -1.83
SEC4YFL005W LAC1P28496 418 aa3.65□□□□□ -1.83
SEC4YFL005W CHS3P29465 1165 aa3.65□□□□□ -1.83
SEC4YFL005W APD1P38281 316 aa3.65□□□□□ -1.83
SEC4YFL005W UBP7P40453 1071 aa3.65□□□□□ -1.83
SEC4YFL005W MNT3P40549 630 aa3.65□□□□□ -1.83
SEC4YFL005W SAE2P46946 345 aa3.65□□□□□ -1.83
SEC4YFL005W YJL043WP47053 257 aa3.65□□□□□ -1.83
SEC4YFL005W VPS4P52917 437 aa3.65□□□□□ -1.83
SEC4YFL005W YDR109CQ04585 715 aa3.65□□□□□ -1.83
SEC4YFL005W RCO1Q04779 684 aa3.65□□□□□ -1.83
SEC4YFL005W SNO4Q04902 237 aa3.65□□□□□ -1.83
SEC4YFL005W HSP33Q08914 237 aaKnown RBP3.65□□□□□ -1.83
SEC4YFL005W HSP32Q08992 237 aa3.65□□□□□ -1.83
SEC4YFL005W NUS1Q12063 375 aa3.65□□□□□ -1.83
SEC4YFL005W NBP2Q12163 236 aa3.65□□□□□ -1.83
SEC4YFL005W ERG8P24521 451 aa3.64□□□□□ -1.83
SEC4YFL005W PTC6P25646 442 aa3.64□□□□□ -1.83
SEC4YFL005W TFC3P34111 1160 aa3.64□□□□□ -1.83
SEC4YFL005W PHM8P40025 321 aa3.64□□□□□ -1.83
SEC4YFL005W DPH1P40487 425 aaKnown RBP3.64□□□□□ -1.83
SEC4YFL005W YRB30P53107 440 aaPredicted RBP3.64□□□□□ -1.83
SEC4YFL005W SPN1Q06505 410 aaPredicted RBP3.64□□□□□ -1.83
SEC4YFL005W YDR056CQ12025 205 aa3.64□□□□□ -1.83
SEC4YFL005W RDL1Q12305 139 aaKnown RBP3.64□□□□□ -1.83
SEC4YFL005W BI2P03873 423 aa3.63□□□□□ -1.83
SEC4YFL005W ILV2P07342 687 aaKnown RBP3.63□□□□□ -1.83
SEC4YFL005W RPB2P08518 1224 aaKnown RBP3.63□□□□□ -1.83
SEC4YFL005W SRB5P32585 307 aa3.63□□□□□ -1.83
SEC4YFL005W PSD1P39006 500 aa3.63□□□□□ -1.83
SEC4YFL005W PFK26P40433 827 aaKnown RBP3.63□□□□□ -1.83
SEC4YFL005W TAX4P47030 604 aa3.63□□□□□ -1.83
SEC4YFL005W DCP2P53550 970 aaKnown RBP3.63□□□□□ -1.83
SEC4YFL005W REG1Q00816 1014 aa3.63□□□□□ -1.83
SEC4YFL005W RAD34Q06665 692 aa3.63□□□□□ -1.83
SEC4YFL005W LEA1Q08963 238 aaPredicted RBP3.63□□□□□ -1.83
SEC4YFL005W VCX1Q99385 411 aa3.63□□□□□ -1.83
SEC4YFL005W RTC1Q08281 1341 aa3.63□□□□□ -1.83
SEC4YFL005W MAK32P23060 363 aa3.62□□□□□ -1.83
SEC4YFL005W YSP3P25036 478 aa3.62□□□□□ -1.83
SEC4YFL005W MRP20P32387 263 aa3.62□□□□□ -1.83
SEC4YFL005W HOT13P36078 116 aa3.62□□□□□ -1.83
SEC4YFL005W YJR061WP40355 935 aa3.62□□□□□ -1.83
SEC4YFL005W TMA108P40462 946 aa3.62□□□□□ -1.83
SEC4YFL005W SIP4P46954 829 aa3.62□□□□□ -1.83
SEC4YFL005W SCS3P53012 380 aa3.62□□□□□ -1.83
SEC4YFL005W ADE16P54113 591 aaKnown RBP3.62□□□□□ -1.83
SEC4YFL005W OSW1Q08692 278 aa3.62□□□□□ -1.83
SEC4YFL005W LYS21Q12122 440 aaKnown RBP3.62□□□□□ -1.83
SEC4YFL005W CET1O13297 549 aaPredicted RBP3.61□□□□□ -1.83
SEC4YFL005W PCT1P13259 424 aa3.61□□□□□ -1.83
SEC4YFL005W YUR1P26725 428 aa3.61□□□□□ -1.83
SEC4YFL005W CDC15P27636 974 aa3.61□□□□□ -1.83
SEC4YFL005W GSH1P32477 678 aa3.61□□□□□ -1.83
SEC4YFL005W ORC2P32833 620 aa3.61□□□□□ -1.83
SEC4YFL005W FTH1P38310 465 aa3.61□□□□□ -1.83
SEC4YFL005W NOP16P40007 231 aaKnown RBP3.61□□□□□ -1.83
SEC4YFL005W ASG1P40467 964 aa3.61□□□□□ -1.83
SEC4YFL005W ARC1P46672 376 aaKnown RBP3.61□□□□□ -1.83
SEC4YFL005W BSC5P53755 489 aa3.61□□□□□ -1.83
SEC4YFL005W MUB1Q03162 620 aa3.61□□□□□ -1.83
SEC4YFL005W CRN1Q06440 651 aa3.61□□□□□ -1.83
SEC4YFL005W BSP1Q06604 576 aa3.61□□□□□ -1.83
SEC4YFL005W SWA2Q06677 668 aa3.61□□□□□ -1.83
SEC4YFL005W PSK2Q08217 1101 aa3.61□□□□□ -1.83
SEC4YFL005W YOR389WQ08912 624 aa3.61□□□□□ -1.83
SEC4YFL005W RRI2Q12348 645 aa3.61□□□□□ -1.83
SEC4YFL005W SKM1Q12469 655 aa3.61□□□□□ -1.83
SEC4YFL005W HOM2P13663 365 aaKnown RBP3.6□□□□□ -1.83
SEC4YFL005W SRP54P20424 541 aaKnown RBP3.6□□□□□ -1.83
SEC4YFL005W IMP2'P32351 346 aa3.6□□□□□ -1.83
SEC4YFL005W MUD2P36084 527 aaKnown RBP3.6□□□□□ -1.83
SEC4YFL005W AAP1P37898 856 aaKnown RBP3.6□□□□□ -1.83
SEC4YFL005W SLZ1P40167 298 aa3.6□□□□□ -1.83
SEC4YFL005W GAT1P43574 510 aa3.6□□□□□ -1.83
SEC4YFL005W YNR061CP53747 219 aa3.6□□□□□ -1.83
SEC4YFL005W IRC3Q06683 689 aa3.6□□□□□ -1.83
SEC4YFL005W ENT1Q12518 454 aa3.6□□□□□ -1.83
SEC4YFL005W CDC16P09798 840 aa3.59□□□□□ -1.83
SEC4YFL005W CDC24P11433 854 aaPredicted RBP3.59□□□□□ -1.83
SEC4YFL005W PAH1P32567 862 aa3.59□□□□□ -1.83
SEC4YFL005W LHS1P36016 881 aa3.59□□□□□ -1.83
SEC4YFL005W ALY1P36117 915 aa3.59□□□□□ -1.83
SEC4YFL005W NTR2P36118 322 aaPredicted RBP3.59□□□□□ -1.83
SEC4YFL005W IMD2P38697 523 aaKnown RBP3.59□□□□□ -1.83
SEC4YFL005W SEC31P38968 1273 aaKnown RBP3.59□□□□□ -1.83
SEC4YFL005W YEL068CP39977 110 aa3.59□□□□□ -1.83
SEC4YFL005W MRX1P40050 688 aa3.59□□□□□ -1.83
SEC4YFL005W FMP10P40098 244 aa3.59□□□□□ -1.83
SEC4YFL005W IME4P41833 600 aa3.59□□□□□ -1.83
SEC4YFL005W RPN11P43588 306 aaKnown RBP3.59□□□□□ -1.83
SEC4YFL005W AAD10P47182 288 aa3.59□□□□□ -1.83
SEC4YFL005W IMD3P50095 523 aaKnown RBP3.59□□□□□ -1.83
SEC4YFL005W PIL1P53252 339 aaKnown RBP3.59□□□□□ -1.83
SEC4YFL005W YPL071CQ02864 156 aa3.59□□□□□ -1.83
SEC4YFL005W FCP1Q03254 732 aa3.59□□□□□ -1.83
SEC4YFL005W THI3Q07471 609 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms