RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeast

Gene FCF1, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FCF1	YDR339C	ARP2	P32381	391 aa	Known RBP	4.09	□□□□□ -1.75
FCF1	YDR339C	DHR2	P36009	735 aa	Predicted RBP	4.09	□□□□□ -1.75
FCF1	YDR339C	YJL193W	P39542	402 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	YEL025C	P39991	1188 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	FTR1	P40088	404 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	YNL195C	P40168	261 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	YJR061W	P40355	935 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	MRK1	P50873	501 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	SPC98	P53540	846 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	TDA9	Q04545	1251 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	RCO1	Q04779	684 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	SNO4	Q04902	237 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	THI22	Q06490	572 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	HSP33	Q08914	237 aa	Known RBP	4.09	□□□□□ -1.75
FCF1	YDR339C	HSP32	Q08992	237 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	NUS1	Q12063	375 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	HUA2	Q12134	243 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	DRS2	P39524	1355 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	YSP2	Q06681	1438 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	TRM3	Q07527	1436 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	CDC25	P04821	1589 aa		4.09	□□□□□ -1.75
FCF1	YDR339C	GCN4	P03069	281 aa		4.08	□□□□□ -1.76
FCF1	YDR339C	SPO16	P17122	198 aa		4.08	□□□□□ -1.76
FCF1	YDR339C	NUP1	P20676	1076 aa		4.08	□□□□□ -1.76
FCF1	YDR339C	SWI4	P25302	1093 aa	Known RBP	4.08	□□□□□ -1.76
FCF1	YDR339C	CDC60	P26637	1090 aa	Known RBP	4.08	□□□□□ -1.76
FCF1	YDR339C	YHR097C	P38809	366 aa	Known RBP	4.08	□□□□□ -1.76
FCF1	YDR339C	CRG1	P38892	291 aa	RIP-Chip data	4.08	□□□□□ -1.76	not detected
FCF1	YDR339C	CIR1	P42940	261 aa		4.08	□□□□□ -1.76
FCF1	YDR339C	BNA3	P47039	444 aa	Known RBP	4.08	□□□□□ -1.76
FCF1	YDR339C	PIL1	P53252	339 aa	Known RBP	4.08	□□□□□ -1.76
FCF1	YDR339C	YGR151C	P53287	111 aa		4.08	□□□□□ -1.76
FCF1	YDR339C	ACS1	Q01574	713 aa		4.08	□□□□□ -1.76
FCF1	YDR339C	FMP30	Q02883	468 aa		4.08	□□□□□ -1.76
FCF1	YDR339C	RCF1	Q03713	159 aa		4.08	□□□□□ -1.76
FCF1	YDR339C	YLR352W	Q06479	807 aa		4.08	□□□□□ -1.76
FCF1	YDR339C	SPN1	Q06505	410 aa	Predicted RBP	4.08	□□□□□ -1.76
FCF1	YDR339C	YFT2	Q06676	274 aa		4.08	□□□□□ -1.76
FCF1	YDR339C	AIM6	Q07716	390 aa		4.08	□□□□□ -1.76
FCF1	YDR339C	SLK19	Q08581	821 aa	Known RBP	4.08	□□□□□ -1.76
FCF1	YDR339C	HSH49	Q99181	213 aa	Predicted RBP	4.08	□□□□□ -1.76
FCF1	YDR339C	HSP82	P02829	709 aa	Known RBP	4.07	□□□□□ -1.76
FCF1	YDR339C	SEC53	P07283	254 aa	Known RBP	4.07	□□□□□ -1.76
FCF1	YDR339C	DAL5	P15365	543 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	PTP1	P25044	335 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	SGF29	P25554	259 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	YMC2	P38087	329 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	CDS1	P38221	457 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	COS111	P38308	924 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	KSP1	P38691	1029 aa	Known RBP	4.07	□□□□□ -1.76
FCF1	YDR339C	TCD1	P38756	429 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	RTR1	P40084	226 aa	Predicted RBP	4.07	□□□□□ -1.76
FCF1	YDR339C	XBP1	P40489	647 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	IDS2	P46958	469 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	YDL183C	P48569	320 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	ASE1	P50275	885 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	VPS4	P52917	437 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	RRT6	P53117	311 aa	Predicted RBP	4.07	□□□□□ -1.76
FCF1	YDR339C	COX17	Q12287	69 aa		4.07	□□□□□ -1.76
FCF1	YDR339C	ERG27	Q12452	347 aa	Known RBP	4.07	□□□□□ -1.76
FCF1	YDR339C	MET8	P15807	274 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	OLE1	P21147	510 aa	Known RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	OCA4	P25366	362 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	FEN2	P25621	512 aa	Known RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	RPS7A	P26786	190 aa	Known RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	YMC1	P32331	307 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	SWI3	P32591	825 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	DSS4	P32601	143 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	BCS1	P32839	456 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	YBL029W	P38201	376 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	MUM2	P38236	366 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	MIT1	P40002	666 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	LRO1	P40345	661 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	YIL161W	P40449	235 aa	Known RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	YIL077C	P40508	320 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	SMC3	P47037	1230 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	ZAP1	P47043	880 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	COG1	P53079	417 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	NMA2	P53204	395 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	CSL4	P53859	292 aa	Predicted RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	SYF1	Q04048	859 aa	Predicted RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	TAF11	Q04226	346 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	YKU80	Q04437	629 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	VAM6	Q07468	1049 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	GRC3	Q07845	632 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	SNU66	Q12420	587 aa	Predicted RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	YOR111W	Q99210	232 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-H	O13535	1793 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-DR5	P0C2I2	1755 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-DR6	P0C2I3	1755 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-LR2	P0C2I5	1755 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-PR2	P0C2J0	1756 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-JR1	P47098	1755 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-ML2	Q03434	1755 aa	Known RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-ER1	Q03612	1755 aa		4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.06	□□□□□ -1.76
FCF1	YDR339C	TY1B-GR2	Q12269	1755 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms