RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C EAF7P53911 425 aaKnown RBP3.33□□□□□ -1.88
AFR1YDR085C STP3Q05937 343 aa3.33□□□□□ -1.88
AFR1YDR085C PIG1Q06216 648 aa3.33□□□□□ -1.88
AFR1YDR085C ATG23Q06671 453 aa3.33□□□□□ -1.88
AFR1YDR085C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
AFR1YDR085C YML003WP0CF16 290 aa3.32□□□□□ -1.88
AFR1YDR085C YEF3P16521 1044 aaKnown RBP3.32□□□□□ -1.88
AFR1YDR085C CLB4P24871 460 aa3.32□□□□□ -1.88
AFR1YDR085C YSP3P25036 478 aa3.32□□□□□ -1.88
AFR1YDR085C LRE1P25579 583 aaKnown RBP3.32□□□□□ -1.88
AFR1YDR085C RFA2P26754 273 aaKnown RBP3.32□□□□□ -1.88
AFR1YDR085C GCD7P32502 381 aaPredicted RBP3.32□□□□□ -1.88
AFR1YDR085C ATO2P32907 282 aa3.32□□□□□ -1.88
AFR1YDR085C SCO2P38072 301 aa3.32□□□□□ -1.88
AFR1YDR085C RPT2P40327 437 aaKnown RBP3.32□□□□□ -1.88
AFR1YDR085C YIR016WP40572 265 aa3.32□□□□□ -1.88
AFR1YDR085C ZAP1P47043 880 aa3.32□□□□□ -1.88
AFR1YDR085C ADE16P54113 591 aaKnown RBP3.32□□□□□ -1.88
AFR1YDR085C TRS130Q03660 1102 aa3.32□□□□□ -1.88
AFR1YDR085C GEX2P36173 615 aa3.31□□□□□ -1.88
AFR1YDR085C YIL152WP40455 235 aa3.31□□□□□ -1.88
AFR1YDR085C YNL144CP53907 740 aa3.31□□□□□ -1.88
AFR1YDR085C VAM6Q07468 1049 aa3.31□□□□□ -1.88
AFR1YDR085C MCH4Q08268 501 aa3.31□□□□□ -1.88
AFR1YDR085C SRL1Q08673 210 aa3.31□□□□□ -1.88
AFR1YDR085C UBX3Q12229 455 aa3.31□□□□□ -1.88
AFR1YDR085C NCP1P16603 691 aaKnown RBP3.3□□□□□ -1.88
AFR1YDR085C EXO84P38261 753 aa3.3□□□□□ -1.88
AFR1YDR085C ERR3P42222 437 aa3.3□□□□□ -1.88
AFR1YDR085C LSC1P53598 329 aaKnown RBP3.3□□□□□ -1.88
AFR1YDR085C PAP2P53632 584 aaKnown RBP3.3□□□□□ -1.88
AFR1YDR085C NUP53Q03790 475 aa3.3□□□□□ -1.88
AFR1YDR085C SNA4Q07549 140 aa3.3□□□□□ -1.88
AFR1YDR085C YOL057WQ08225 711 aa3.3□□□□□ -1.88
AFR1YDR085C BOP3P53958 396 aa3.3□□□□□ -1.88
AFR1YDR085C GPA1P08539 472 aa3.29□□□□□ -1.88
AFR1YDR085C SUI3P09064 285 aaKnown RBP3.29□□□□□ -1.88
AFR1YDR085C PHO81P17442 1178 aa3.29□□□□□ -1.88
AFR1YDR085C YCR006CP25350 157 aa3.29□□□□□ -1.88
AFR1YDR085C ACA1P39970 489 aa3.29□□□□□ -1.88
AFR1YDR085C MEP2P41948 499 aa3.29□□□□□ -1.88
AFR1YDR085C STB2P46679 850 aa3.29□□□□□ -1.88
AFR1YDR085C GSH2Q08220 491 aa3.29□□□□□ -1.88
AFR1YDR085C SWT1Q12104 458 aa3.29□□□□□ -1.88
AFR1YDR085C MRP2P10663 115 aaPredicted RBP3.28□□□□□ -1.88
AFR1YDR085C ASG1P40467 964 aa3.28□□□□□ -1.88
AFR1YDR085C FAF1P40546 346 aaPredicted RBP3.28□□□□□ -1.88
AFR1YDR085C YGL036WP53185 909 aaPredicted RBP3.28□□□□□ -1.88
AFR1YDR085C CAC2Q04199 468 aa3.28□□□□□ -1.88
AFR1YDR085C CIA1Q05583 330 aa3.28□□□□□ -1.88
AFR1YDR085C MLH2Q07980 695 aa3.28□□□□□ -1.88
AFR1YDR085C DSE3Q08729 430 aa3.28□□□□□ -1.88
AFR1YDR085C BUD7Q08754 746 aa3.28□□□□□ -1.88
AFR1YDR085C FRE3Q08905 711 aa3.28□□□□□ -1.88
AFR1YDR085C YER145C-AA0A023PYF4 145 aa3.28□□□□□ -1.88
AFR1YDR085C APA1P16550 321 aaKnown RBP3.28□□□□□ -1.88
AFR1YDR085C UBP8P50102 471 aa3.28□□□□□ -1.88
AFR1YDR085C SWF1Q04629 336 aa3.28□□□□□ -1.88
AFR1YDR085C YLR455WQ06188 304 aa3.28□□□□□ -1.88
AFR1YDR085C RPL42AP0CX27 106 aaKnown RBP3.27□□□□□ -1.89
AFR1YDR085C RPL42BP0CX28 106 aaKnown RBP3.27□□□□□ -1.89
AFR1YDR085C YFL068WP0CX99 160 aa3.27□□□□□ -1.89
AFR1YDR085C YLL066W-AP0CY00 160 aa3.27□□□□□ -1.89
AFR1YDR085C YLL067W-AP0CY01 160 aa3.27□□□□□ -1.89
AFR1YDR085C MSM1P22438 575 aa3.27□□□□□ -1.89
AFR1YDR085C YCR043CP25361 127 aa3.27□□□□□ -1.89
AFR1YDR085C YCL049CP25577 312 aa3.27□□□□□ -1.89
AFR1YDR085C NPR3P38742 1146 aa3.27□□□□□ -1.89
AFR1YDR085C YIL161WP40449 235 aaKnown RBP3.27□□□□□ -1.89
AFR1YDR085C VPS25P47142 202 aa3.27□□□□□ -1.89
AFR1YDR085C DCP2P53550 970 aaKnown RBP3.27□□□□□ -1.89
AFR1YDR085C ARC35P53731 342 aaKnown RBP3.27□□□□□ -1.89
AFR1YDR085C UBX4P54730 416 aa3.27□□□□□ -1.89
AFR1YDR085C SWA2Q06677 668 aa3.27□□□□□ -1.89
AFR1YDR085C ATP2P00830 511 aaKnown RBP3.26□□□□□ -1.89
AFR1YDR085C SPO16P17122 198 aa3.26□□□□□ -1.89
AFR1YDR085C SRP54P20424 541 aaKnown RBP3.26□□□□□ -1.89
AFR1YDR085C NUP120P35729 1037 aa3.26□□□□□ -1.89
AFR1YDR085C ADE17P38009 592 aaKnown RBP3.26□□□□□ -1.89
AFR1YDR085C UBP13P38187 747 aa3.26□□□□□ -1.89
AFR1YDR085C ARC40P38328 384 aaKnown RBP3.26□□□□□ -1.89
AFR1YDR085C CSL4P53859 292 aaPredicted RBP3.26□□□□□ -1.89
AFR1YDR085C YMR034CQ05131 434 aaPredicted RBP3.26□□□□□ -1.89
AFR1YDR085C YLR112WQ12130 139 aa3.26□□□□□ -1.89
AFR1YDR085C PSF2P40359 213 aa3.26□□□□□ -1.89
AFR1YDR085C TES1P41903 349 aaKnown RBP3.26□□□□□ -1.89
AFR1YDR085C YLR049CQ12110 428 aa3.26□□□□□ -1.89
AFR1YDR085C POS5Q06892 414 aa3.25□□□□□ -1.89
AFR1YDR085C COX17Q12287 69 aa3.25□□□□□ -1.89
AFR1YDR085C PCD1Q12524 340 aa3.25□□□□□ -1.89
AFR1YDR085C CHO1P08456 276 aa3.24□□□□□ -1.89
AFR1YDR085C MTF2P10849 440 aa3.24□□□□□ -1.89
AFR1YDR085C PGI1P12709 554 aaKnown RBP3.24□□□□□ -1.89
AFR1YDR085C MRPL36P36531 177 aa3.24□□□□□ -1.89
AFR1YDR085C PCL6P40038 420 aa3.24□□□□□ -1.89
AFR1YDR085C CRN1Q06440 651 aa3.24□□□□□ -1.89
AFR1YDR085C NUC1P08466 329 aa3.24□□□□□ -1.89
AFR1YDR085C PET111P08468 800 aa3.24□□□□□ -1.89
AFR1YDR085C TY2A-LR1P0C2J4 438 aa3.24□□□□□ -1.89
AFR1YDR085C TY2A-FP0CX61 438 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms