RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C EMP65P40085 556 aa2.37□□□□□ -2.03
YDR008CYDR008C PEX14P53112 341 aa2.37□□□□□ -2.03
YDR008CYDR008C HOL1P53389 586 aa2.37□□□□□ -2.03
YDR008CYDR008C FOL1P53848 824 aa2.37□□□□□ -2.03
YDR008CYDR008C LEA1Q08963 238 aaPredicted RBP2.37□□□□□ -2.03
YDR008CYDR008C APM4Q99186 491 aa2.37□□□□□ -2.03
YDR008CYDR008C COX11P19516 300 aaKnown RBP2.36□□□□□ -2.03
YDR008CYDR008C MRC1P25588 1096 aa2.36□□□□□ -2.03
YDR008CYDR008C TFC4P33339 1025 aa2.36□□□□□ -2.03
YDR008CYDR008C YBR071WP38243 211 aa2.36□□□□□ -2.03
YDR008CYDR008C YJR120WP47157 116 aa2.36□□□□□ -2.03
YDR008CYDR008C UBP8P50102 471 aa2.36□□□□□ -2.03
YDR008CYDR008C NGL1Q08213 363 aaKnown RBP2.36□□□□□ -2.03
YDR008CYDR008C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
YDR008CYDR008C KGD2P19262 463 aaPredicted RBP2.35□□□□□ -2.03
YDR008CYDR008C HXT4P32467 576 aa2.35□□□□□ -2.03
YDR008CYDR008C SRP68P38687 599 aaKnown RBP2.35□□□□□ -2.03
YDR008CYDR008C RTS1P38903 757 aa2.35□□□□□ -2.03
YDR008CYDR008C GPP2P40106 250 aaKnown RBP2.35□□□□□ -2.03
YDR008CYDR008C NIT2P47016 307 aa2.35□□□□□ -2.03
YDR008CYDR008C PHM6Q05637 104 aa2.35□□□□□ -2.03
YDR008CYDR008C YPL191CQ08930 360 aa2.35□□□□□ -2.03
YDR008CYDR008C CWC2Q12046 339 aaPredicted RBP2.35□□□□□ -2.03
YDR008CYDR008C HOS1Q12214 470 aa2.35□□□□□ -2.03
YDR008CYDR008C TOM20P35180 183 aa2.34□□□□□ -2.03
YDR008CYDR008C GRX7P38068 203 aa2.34□□□□□ -2.03
YDR008CYDR008C ASK10P48361 1146 aa2.34□□□□□ -2.03
YDR008CYDR008C PEX15Q08215 383 aa2.34□□□□□ -2.03
YDR008CYDR008C SOD1P00445 154 aaKnown RBP2.33□□□□□ -2.04
YDR008CYDR008C ATP12P22135 325 aa2.33□□□□□ -2.04
YDR008CYDR008C SER1P33330 395 aaKnown RBP2.33□□□□□ -2.04
YDR008CYDR008C PAF1P38351 445 aa2.33□□□□□ -2.04
YDR008CYDR008C SAW1P39735 261 aa2.33□□□□□ -2.04
YDR008CYDR008C TAN1P53072 289 aaPredicted RBP2.33□□□□□ -2.04
YDR008CYDR008C COG6P53959 839 aa2.33□□□□□ -2.04
YDR008CYDR008C ECM38Q05902 660 aaPredicted RBP2.33□□□□□ -2.04
YDR008CYDR008C YDL012CQ12489 107 aa2.33□□□□□ -2.04
YDR008CYDR008C RPS2P25443 254 aaKnown RBP2.32□□□□□ -2.04
YDR008CYDR008C HEM12P32347 362 aaPredicted RBP2.32□□□□□ -2.04
YDR008CYDR008C TAF5P38129 798 aa2.32□□□□□ -2.04
YDR008CYDR008C STL1P39932 569 aa2.32□□□□□ -2.04
YDR008CYDR008C SMK1P41808 388 aa2.32□□□□□ -2.04
YDR008CYDR008C YNL181WP53878 407 aa2.32□□□□□ -2.04
YDR008CYDR008C TMA7Q3E764 64 aaKnown RBP2.32□□□□□ -2.04
YDR008CYDR008C VPS5Q92331 675 aa2.32□□□□□ -2.04
YDR008CYDR008C CWH43P25618 953 aa2.31□□□□□ -2.04
YDR008CYDR008C SDS22P36047 338 aa2.31□□□□□ -2.04
YDR008CYDR008C LNP1P38878 278 aa2.31□□□□□ -2.04
YDR008CYDR008C SWF1Q04629 336 aa2.31□□□□□ -2.04
YDR008CYDR008C YOR378WQ08902 515 aa2.31□□□□□ -2.04
YDR008CYDR008C NUR1Q12066 484 aa2.31□□□□□ -2.04
YDR008CYDR008C PSF3Q12146 194 aa2.31□□□□□ -2.04
YDR008CYDR008C CTT1P06115 562 aa2.3□□□□□ -2.04
YDR008CYDR008C ARG1P22768 420 aa2.3□□□□□ -2.04
YDR008CYDR008C PHO3P24031 467 aa2.3□□□□□ -2.04
YDR008CYDR008C YCR006CP25350 157 aa2.3□□□□□ -2.04
YDR008CYDR008C LOS1P33418 1100 aaPredicted RBP2.3□□□□□ -2.04
YDR008CYDR008C SRO77P38163 1010 aa2.3□□□□□ -2.04
YDR008CYDR008C ERC1P38767 581 aa2.3□□□□□ -2.04
YDR008CYDR008C EAF5P39995 279 aa2.3□□□□□ -2.04
YDR008CYDR008C SLX4Q12098 748 aa2.3□□□□□ -2.04
YDR008CYDR008C NYV1Q12255 253 aa2.3□□□□□ -2.04
YDR008CYDR008C YER145C-AA0A023PYF4 145 aa2.29□□□□□ -2.04
YDR008CYDR008C PET309P32522 965 aaPredicted RBP2.29□□□□□ -2.04
YDR008CYDR008C SSP120P39931 234 aaKnown RBP2.29□□□□□ -2.04
YDR008CYDR008C IRC5P43610 853 aa2.29□□□□□ -2.04
YDR008CYDR008C VAS1P07806 1104 aaKnown RBP2.28□□□□□ -2.04
YDR008CYDR008C YEF3P16521 1044 aaKnown RBP2.28□□□□□ -2.04
YDR008CYDR008C PDR3P33200 976 aa2.28□□□□□ -2.04
YDR008CYDR008C TGL1P34163 548 aa2.28□□□□□ -2.04
YDR008CYDR008C YKL133CP36066 463 aa2.28□□□□□ -2.04
YDR008CYDR008C SCS2P40075 244 aaKnown RBP2.28□□□□□ -2.04
YDR008CYDR008C YIR014WP40570 242 aa2.28□□□□□ -2.04
YDR008CYDR008C IDS2P46958 469 aa2.28□□□□□ -2.04
YDR008CYDR008C MNT2P53059 558 aa2.28□□□□□ -2.04
YDR008CYDR008C MPD2Q99316 277 aa2.28□□□□□ -2.04
YDR008CYDR008C URA3P03962 267 aa2.27□□□□□ -2.05
YDR008CYDR008C GPA1P08539 472 aa2.27□□□□□ -2.05
YDR008CYDR008C GLN3P18494 730 aa2.27□□□□□ -2.05
YDR008CYDR008C ENP1P38333 483 aaKnown RBP2.27□□□□□ -2.05
YDR008CYDR008C VFA1P40080 203 aa2.27□□□□□ -2.05
YDR008CYDR008C VPS27P40343 622 aaKnown RBP2.27□□□□□ -2.05
YDR008CYDR008C FAF1P40546 346 aaPredicted RBP2.27□□□□□ -2.05
YDR008CYDR008C YNL034WP53963 612 aa2.27□□□□□ -2.05
YDR008CYDR008C YDR415CQ04033 374 aaPredicted RBP2.27□□□□□ -2.05
YDR008CYDR008C DBP10Q12389 995 aaKnown RBP2.27□□□□□ -2.05
YDR008CYDR008C MRS3P10566 314 aa2.26□□□□□ -2.05
YDR008CYDR008C YCR061WP25639 631 aa2.26□□□□□ -2.05
YDR008CYDR008C MDM31P38880 579 aa2.26□□□□□ -2.05
YDR008CYDR008C GSM1P42950 618 aa2.26□□□□□ -2.05
YDR008CYDR008C YGL242CP53066 181 aa2.26□□□□□ -2.05
YDR008CYDR008C PEX8P53248 589 aa2.26□□□□□ -2.05
YDR008CYDR008C YNR071CP53757 342 aa2.26□□□□□ -2.05
YDR008CYDR008C CNM67P53865 581 aaKnown RBP2.26□□□□□ -2.05
YDR008CYDR008C TRI1Q05024 226 aa2.26□□□□□ -2.05
YDR008CYDR008C RTK1Q12100 620 aaPredicted RBP2.26□□□□□ -2.05
YDR008CYDR008C SST2P11972 698 aaKnown RBP2.25□□□□□ -2.05
YDR008CYDR008C RPS7AP26786 190 aaKnown RBP2.25□□□□□ -2.05
YDR008CYDR008C SWC3P31376 625 aa2.25□□□□□ -2.05
YDR008CYDR008C MAD2P40958 196 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms