RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W GUP2Q08929 609 aa2.31□□□□□ -2.04
UBP1YDL122W TY1A-GR1Q12085 440 aa2.31□□□□□ -2.04
UBP1YDL122W GNT1Q12096 491 aa2.31□□□□□ -2.04
UBP1YDL122W ZPS1Q12512 249 aa2.31□□□□□ -2.04
UBP1YDL122W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W TY1A-OLQ92392 440 aaKnown RBP2.31□□□□□ -2.04
UBP1YDL122W CYC7P00045 113 aa2.3□□□□□ -2.04
UBP1YDL122W ILV1P00927 576 aaKnown RBP2.3□□□□□ -2.04
UBP1YDL122W PCL2P25693 308 aa2.3□□□□□ -2.04
UBP1YDL122W MLS1P30952 554 aa2.3□□□□□ -2.04
UBP1YDL122W PRP19P32523 503 aaKnown RBP2.3□□□□□ -2.04
UBP1YDL122W LST4P34239 828 aa2.3□□□□□ -2.04
UBP1YDL122W SIF2P38262 535 aa2.3□□□□□ -2.04
UBP1YDL122W GAA1P39012 614 aa2.3□□□□□ -2.04
UBP1YDL122W SIT1P39980 628 aa2.3□□□□□ -2.04
UBP1YDL122W SLS1P42900 643 aa2.3□□□□□ -2.04
UBP1YDL122W EPL1P43572 832 aa2.3□□□□□ -2.04
UBP1YDL122W STB4P50104 949 aa2.3□□□□□ -2.04
UBP1YDL122W VEL1P53058 206 aa2.3□□□□□ -2.04
UBP1YDL122W NCS2P53923 493 aaPredicted RBP2.3□□□□□ -2.04
UBP1YDL122W EGD1Q02642 157 aaKnown RBP2.3□□□□□ -2.04
UBP1YDL122W FAR10Q06001 478 aa2.3□□□□□ -2.04
UBP1YDL122W SPP382Q06411 708 aaPredicted RBP2.3□□□□□ -2.04
UBP1YDL122W ADE8P04161 214 aa2.3□□□□□ -2.04
UBP1YDL122W GAL1P04385 528 aa2.3□□□□□ -2.04
UBP1YDL122W SPT15P13393 240 aaKnown RBP2.3□□□□□ -2.04
UBP1YDL122W PMS1P14242 873 aa2.3□□□□□ -2.04
UBP1YDL122W SFL1P20134 766 aa2.3□□□□□ -2.04
UBP1YDL122W AEP2P22136 580 aa2.3□□□□□ -2.04
UBP1YDL122W PRR1P28708 518 aa2.3□□□□□ -2.04
UBP1YDL122W PTP2P29461 750 aa2.3□□□□□ -2.04
UBP1YDL122W PSO2P30620 661 aa2.3□□□□□ -2.04
UBP1YDL122W SSH4P32343 579 aa2.3□□□□□ -2.04
UBP1YDL122W ELM1P32801 640 aa2.3□□□□□ -2.04
UBP1YDL122W SPC29P33419 253 aa2.3□□□□□ -2.04
UBP1YDL122W NIC96P34077 839 aa2.3□□□□□ -2.04
UBP1YDL122W ECM21P38167 1117 aaKnown RBP2.3□□□□□ -2.04
UBP1YDL122W ALG3P38179 458 aa2.3□□□□□ -2.04
UBP1YDL122W TIM17P39515 158 aa2.3□□□□□ -2.04
UBP1YDL122W FHL1P39521 936 aa2.3□□□□□ -2.04
UBP1YDL122W YJR096WP47137 282 aa2.3□□□□□ -2.04
UBP1YDL122W ESF2P53743 316 aaKnown RBP2.3□□□□□ -2.04
UBP1YDL122W MTD1Q02046 320 aaKnown RBP2.3□□□□□ -2.04
UBP1YDL122W REH1Q06709 432 aa2.3□□□□□ -2.04
UBP1YDL122W YTM1Q12024 460 aaPredicted RBP2.3□□□□□ -2.04
UBP1YDL122W YLL054CQ12244 843 aa2.3□□□□□ -2.04
UBP1YDL122W LPX1Q12405 387 aaKnown RBP2.3□□□□□ -2.04
UBP1YDL122W CDC16P09798 840 aa2.29□□□□□ -2.04
UBP1YDL122W CDC24P11433 854 aaPredicted RBP2.29□□□□□ -2.04
UBP1YDL122W MIH1P23748 554 aa2.29□□□□□ -2.04
UBP1YDL122W RSM22P36056 628 aa2.29□□□□□ -2.04
UBP1YDL122W YRO2P38079 344 aa2.29□□□□□ -2.04
UBP1YDL122W ARL1P38116 183 aaKnown RBP2.29□□□□□ -2.04
UBP1YDL122W CTP1P38152 299 aa2.29□□□□□ -2.04
UBP1YDL122W CKB2P38930 258 aa2.29□□□□□ -2.04
UBP1YDL122W AVT2P39981 480 aa2.29□□□□□ -2.04
UBP1YDL122W GTS1P40956 396 aa2.29□□□□□ -2.04
UBP1YDL122W AVT1P47082 602 aa2.29□□□□□ -2.04
UBP1YDL122W TAN1P53072 289 aaPredicted RBP2.29□□□□□ -2.04
UBP1YDL122W CAF130P53280 1122 aaPredicted RBP2.29□□□□□ -2.04
UBP1YDL122W PBP1P53297 722 aaKnown RBP2.29□□□□□ -2.04
UBP1YDL122W FDC1Q03034 503 aa2.29□□□□□ -2.04
UBP1YDL122W TRS23Q03784 219 aa2.29□□□□□ -2.04
UBP1YDL122W SHS1Q07657 551 aa2.29□□□□□ -2.04
UBP1YDL122W PTC5Q12511 572 aa2.29□□□□□ -2.04
UBP1YDL122W ERS1P17261 260 aa2.29□□□□□ -2.04
UBP1YDL122W STO1P34160 861 aaKnown RBP2.29□□□□□ -2.04
UBP1YDL122W YNG2P38806 282 aaKnown RBP2.29□□□□□ -2.04
UBP1YDL122W RPN3P40016 523 aaKnown RBP2.29□□□□□ -2.04
UBP1YDL122W SPG5P42933 373 aa2.29□□□□□ -2.04
UBP1YDL122W CUE3P53137 624 aaKnown RBP2.29□□□□□ -2.04
UBP1YDL122W YDR541CQ03049 344 aa2.29□□□□□ -2.04
UBP1YDL122W COG8Q04632 607 aa2.29□□□□□ -2.04
UBP1YDL122W TFC6Q06339 672 aa2.29□□□□□ -2.04
UBP1YDL122W MLC2Q06580 163 aa2.29□□□□□ -2.04
UBP1YDL122W PSR2Q07949 397 aa2.29□□□□□ -2.04
UBP1YDL122W YLR030WQ07967 263 aa2.29□□□□□ -2.04
UBP1YDL122W RSB1Q08417 382 aa2.29□□□□□ -2.04
UBP1YDL122W YIG1Q08956 461 aa2.29□□□□□ -2.04
UBP1YDL122W YOR223WQ12015 292 aa2.29□□□□□ -2.04
UBP1YDL122W FRS2P15625 503 aaKnown RBP2.28□□□□□ -2.04
UBP1YDL122W MOH1P38191 138 aa2.28□□□□□ -2.04
UBP1YDL122W OAF1P39720 1047 aaPredicted RBP2.28□□□□□ -2.04
UBP1YDL122W YAL037WP39728 267 aa2.28□□□□□ -2.04
UBP1YDL122W SER3P40054 469 aa2.28□□□□□ -2.04
UBP1YDL122W RPT2P40327 437 aaKnown RBP2.28□□□□□ -2.04
UBP1YDL122W GZF3P42944 551 aaKnown RBP2.28□□□□□ -2.04
UBP1YDL122W CAF16P43569 289 aa2.28□□□□□ -2.04
UBP1YDL122W GUF1P46943 645 aa2.28□□□□□ -2.04
UBP1YDL122W NIT2P47016 307 aa2.28□□□□□ -2.04
UBP1YDL122W GCV1P48015 400 aa2.28□□□□□ -2.04
UBP1YDL122W ARK1P53974 638 aa2.28□□□□□ -2.04
UBP1YDL122W SNP1Q00916 300 aaPredicted RBP2.28□□□□□ -2.04
UBP1YDL122W RSF1Q05043 376 aa2.28□□□□□ -2.04
UBP1YDL122W ECM38Q05902 660 aaPredicted RBP2.28□□□□□ -2.04
UBP1YDL122W CUR1Q06469 252 aa2.28□□□□□ -2.04
UBP1YDL122W RMP1Q12530 201 aa2.28□□□□□ -2.04
UBP1YDL122W PHO2P07269 559 aa2.28□□□□□ -2.04
UBP1YDL122W YER152CP10356 443 aa2.28□□□□□ -2.04
UBP1YDL122W SCL1P21243 252 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 226 ms