RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A UBP7P40453 1071 aa3.71□□□□□ -1.82
RIM1YCR028C-A ZAP1P47043 880 aa3.71□□□□□ -1.82
RIM1YCR028C-A COP1P53622 1201 aaKnown RBP3.71□□□□□ -1.82
RIM1YCR028C-A SEC5P89102 971 aa3.71□□□□□ -1.82
RIM1YCR028C-A GTB1Q04924 702 aa3.71□□□□□ -1.82
RIM1YCR028C-A STP3Q05937 343 aa3.71□□□□□ -1.82
RIM1YCR028C-A SPT7P35177 1332 aa3.7□□□□□ -1.82
RIM1YCR028C-A NCP1P16603 691 aaKnown RBP3.7□□□□□ -1.82
RIM1YCR028C-A COQ3P27680 312 aa3.7□□□□□ -1.82
RIM1YCR028C-A TMT1P32643 299 aa3.7□□□□□ -1.82
RIM1YCR028C-A ECM32P32644 1121 aaKnown RBP3.7□□□□□ -1.82
RIM1YCR028C-A MRPL36P36531 177 aa3.7□□□□□ -1.82
RIM1YCR028C-A FLO5P38894 1075 aa3.7□□□□□ -1.82
RIM1YCR028C-A TPM2P40414 161 aa3.7□□□□□ -1.82
RIM1YCR028C-A YIL024CP40543 189 aa3.7□□□□□ -1.82
RIM1YCR028C-A CFD1P40558 293 aa3.7□□□□□ -1.82
RIM1YCR028C-A ORC5P50874 479 aa3.7□□□□□ -1.82
RIM1YCR028C-A YPR003CP53394 754 aa3.7□□□□□ -1.82
RIM1YCR028C-A YAP7Q08182 245 aa3.7□□□□□ -1.82
RIM1YCR028C-A RGT2Q12300 763 aa3.7□□□□□ -1.82
RIM1YCR028C-A CAT8P39113 1433 aa3.7□□□□□ -1.82
RIM1YCR028C-A RFA2P26754 273 aaKnown RBP3.69□□□□□ -1.82
RIM1YCR028C-A DBF20P32328 564 aa3.69□□□□□ -1.82
RIM1YCR028C-A MSS51P32335 436 aa3.69□□□□□ -1.82
RIM1YCR028C-A NUP120P35729 1037 aa3.69□□□□□ -1.82
RIM1YCR028C-A MSY1P48527 492 aa3.69□□□□□ -1.82
RIM1YCR028C-A MRPL13Q02204 264 aa3.69□□□□□ -1.82
RIM1YCR028C-A CIA1Q05583 330 aa3.69□□□□□ -1.82
RIM1YCR028C-A ATG23Q06671 453 aa3.69□□□□□ -1.82
RIM1YCR028C-A THI3Q07471 609 aa3.69□□□□□ -1.82
RIM1YCR028C-A PFA4Q12006 378 aa3.69□□□□□ -1.82
RIM1YCR028C-A MLP2P40457 1679 aa3.68□□□□□ -1.82
RIM1YCR028C-A VPS15P22219 1454 aa3.68□□□□□ -1.82
RIM1YCR028C-A YPR089WO13585 888 aa3.68□□□□□ -1.82
RIM1YCR028C-A GAL4P04386 881 aa3.68□□□□□ -1.82
RIM1YCR028C-A YML003WP0CF16 290 aa3.68□□□□□ -1.82
RIM1YCR028C-A MNT3P40549 630 aa3.68□□□□□ -1.82
RIM1YCR028C-A DJP1P40564 432 aa3.68□□□□□ -1.82
RIM1YCR028C-A ERR3P42222 437 aa3.68□□□□□ -1.82
RIM1YCR028C-A YJL107CP42947 387 aa3.68□□□□□ -1.82
RIM1YCR028C-A YRB30P53107 440 aaPredicted RBP3.68□□□□□ -1.82
RIM1YCR028C-A ADE16P54113 591 aaKnown RBP3.68□□□□□ -1.82
RIM1YCR028C-A BLS1Q06071 122 aa3.68□□□□□ -1.82
RIM1YCR028C-A GEP3Q08622 556 aa3.68□□□□□ -1.82
RIM1YCR028C-A BAG7Q12128 409 aa3.68□□□□□ -1.82
RIM1YCR028C-A COX17Q12287 69 aa3.68□□□□□ -1.82
RIM1YCR028C-A VTH1P40438 1549 aa3.68□□□□□ -1.82
RIM1YCR028C-A VTH2P40890 1549 aa3.68□□□□□ -1.82
RIM1YCR028C-A SNT2P53127 1403 aa3.68□□□□□ -1.82
RIM1YCR028C-A ATP2P00830 511 aaKnown RBP3.67□□□□□ -1.82
RIM1YCR028C-A SUI3P09064 285 aaKnown RBP3.67□□□□□ -1.82
RIM1YCR028C-A PTH2P34222 208 aa3.67□□□□□ -1.82
RIM1YCR028C-A ARN1P38731 627 aa3.67□□□□□ -1.82
RIM1YCR028C-A NPR3P38742 1146 aa3.67□□□□□ -1.82
RIM1YCR028C-A ARC35P53731 342 aaKnown RBP3.67□□□□□ -1.82
RIM1YCR028C-A ECM22Q05958 814 aaPredicted RBP3.67□□□□□ -1.82
RIM1YCR028C-A PDR8Q06149 701 aa3.67□□□□□ -1.82
RIM1YCR028C-A SWT1Q12104 458 aa3.67□□□□□ -1.82
RIM1YCR028C-A HER1Q12276 1246 aa3.67□□□□□ -1.82
RIM1YCR028C-A SRB8P25648 1427 aa3.67□□□□□ -1.82
RIM1YCR028C-A GEA2P39993 1459 aaKnown RBP3.67□□□□□ -1.82
RIM1YCR028C-A YER190C-BP0CX94 160 aa3.66□□□□□ -1.82
RIM1YCR028C-A YEL077W-AP0CX95 160 aa3.66□□□□□ -1.82
RIM1YCR028C-A YGR296C-BP0CX96 160 aa3.66□□□□□ -1.82
RIM1YCR028C-A YPL283W-BP0CX97 160 aa3.66□□□□□ -1.82
RIM1YCR028C-A YPR204C-AP0CX98 160 aa3.66□□□□□ -1.82
RIM1YCR028C-A YCR006CP25350 157 aa3.66□□□□□ -1.82
RIM1YCR028C-A YCL049CP25577 312 aa3.66□□□□□ -1.82
RIM1YCR028C-A LRE1P25579 583 aaKnown RBP3.66□□□□□ -1.82
RIM1YCR028C-A RPT3P33298 428 aaKnown RBP3.66□□□□□ -1.82
RIM1YCR028C-A EXO84P38261 753 aa3.66□□□□□ -1.82
RIM1YCR028C-A YIL161WP40449 235 aaKnown RBP3.66□□□□□ -1.82
RIM1YCR028C-A VAM6Q07468 1049 aa3.66□□□□□ -1.82
RIM1YCR028C-A GET3Q12154 354 aaKnown RBP3.66□□□□□ -1.82
RIM1YCR028C-A RRI1Q12468 440 aa3.66□□□□□ -1.82
RIM1YCR028C-A NUP159P40477 1460 aa3.66□□□□□ -1.82
RIM1YCR028C-A ULS1Q08562 1619 aa3.66□□□□□ -1.82
RIM1YCR028C-A SPO16P17122 198 aa3.65□□□□□ -1.83
RIM1YCR028C-A UBC1P21734 215 aaKnown RBP3.65□□□□□ -1.83
RIM1YCR028C-A YSP3P25036 478 aa3.65□□□□□ -1.83
RIM1YCR028C-A MGM1P32266 881 aa3.65□□□□□ -1.83
RIM1YCR028C-A SCO2P38072 301 aa3.65□□□□□ -1.83
RIM1YCR028C-A PCI8P40512 444 aa3.65□□□□□ -1.83
RIM1YCR028C-A CDC1P40986 491 aa3.65□□□□□ -1.83
RIM1YCR028C-A SMK1P41808 388 aa3.65□□□□□ -1.83
RIM1YCR028C-A MPS1P54199 764 aa3.65□□□□□ -1.83
RIM1YCR028C-A MRPL1Q04599 285 aa3.65□□□□□ -1.83
RIM1YCR028C-A BUD21Q08492 214 aaPredicted RBP3.65□□□□□ -1.83
RIM1YCR028C-A PCD1Q12524 340 aa3.65□□□□□ -1.83
RIM1YCR028C-A TY3B-GQ99315 1547 aa3.65□□□□□ -1.83
RIM1YCR028C-A MHP1P43638 1398 aa3.64□□□□□ -1.83
RIM1YCR028C-A TPK1P06244 397 aa3.64□□□□□ -1.83
RIM1YCR028C-A MRP2P10663 115 aaPredicted RBP3.64□□□□□ -1.83
RIM1YCR028C-A PFK2P16862 959 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
RIM1YCR028C-A CNA1P23287 553 aa3.64□□□□□ -1.83
RIM1YCR028C-A PRS1P32895 427 aaKnown RBP3.64□□□□□ -1.83
RIM1YCR028C-A GEX2P36173 615 aa3.64□□□□□ -1.83
RIM1YCR028C-A IFA38P38286 347 aa3.64□□□□□ -1.83
RIM1YCR028C-A SPC97P38863 823 aa3.64□□□□□ -1.83
RIM1YCR028C-A YMR124WP39523 943 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms